Perognathus longimembris pacificus (Pacific pocket mouse): 125343533
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Entry
125343533 CDS
T08928
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03010
Ribosome
plop04120
Ubiquitin mediated proteolysis
plop04137
Mitophagy - animal
plop04140
Autophagy - animal
plop05012
Parkinson disease
plop05022
Pathways of neurodegeneration - multiple diseases
plop05167
Kaposi sarcoma-associated herpesvirus infection
plop05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
125343533
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125343533
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125343533
04137 Mitophagy - animal
125343533
09160 Human Diseases
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
125343533
05167 Kaposi sarcoma-associated herpesvirus infection
125343533
09164 Neurodegenerative disease
05012 Parkinson disease
125343533
05022 Pathways of neurodegeneration - multiple diseases
125343533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
plop03011
]
125343533
04121 Ubiquitin system [BR:
plop04121
]
125343533
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plop04147
]
125343533
Ribosome [BR:
plop03011
]
Ribosomal proteins
Eukaryotes
Small subunit
125343533
Archaea
125343533
Ubiquitin system [BR:
plop04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
125343533
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125343533
Exosomal proteins of colorectal cancer cells
125343533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
IBR
TBK1_ULD
OTU1_UBXL
DUF2604
Motif
Other DBs
NCBI-GeneID:
125343533
NCBI-ProteinID:
XP_048191957
LinkDB
All DBs
Position
28:complement(35224611..35225151)
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGCTLSDYN
IQKESTLHLVLRLRGGPKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISSLRQE
CPSDECGAGVFMASHFDRHYCGKCYLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtcaaaacccttacagggaagaccatcacactcgaggttgaaccctcg
gataccatagaaaatgtaaaggccaagatccaggacaaggaaggaattcctcctgatcag
caaagactcatctttgctggtaagcagctggaagatggatgtaccttatctgactacaac
attcaaaaggagtccactcttcatttagtgttgagacttcggggtggtcctaagaaaagg
aagaagaagtcttataccactcccaagaaaaacaagcataagaggaagaaggttaaactt
gctgtcctgaaatactataaggtggatgaaaatggcaaaattagcagtcttcgccaagag
tgcccttcagatgaatgtggtgctggagtttttatggctagccactttgacagacattat
tgtggcaagtgttatctaacttactgtttcaacaaaccagaagacaagtga
DBGET
integrated database retrieval system
