Perognathus longimembris pacificus (Pacific pocket mouse): 125343561
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Entry
125343561 CDS
T08928
Symbol
Zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125343561 (Zc3h12b)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
125343561 (Zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
125343561
NCBI-ProteinID:
XP_048192009
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All DBs
Position
X:complement(66535383..66550582)
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AA seq
835 aa
AA seq
DB search
MTATAAVETPKMEKNASKEEKQQPKEDNTEQGNVDSEEWVSSESDLEQMNLKSHSNNSCQ
SGNVQLKKKEMHSKPHRQLCRSPCLDCPSFSQSSILHDSKLDLEKEYQAKMDFALKLGYA
EEQIQSVLNKLGPESLINDVLAELVRLGNKGDSEGQVNLSLLGPRGPSSREIASPELSLE
DEIDNSDNLRPIVIDGSNVAMSHGNKEEFSCRGIQLAVDWFLDKGHKDITVFVPAWRKEQ
SRPDAPITDQDILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNY
RDLQVEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKKPVVPEHKKQPC
PYGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSTVKTMSEGTLAKCGTGMSSAKG
EMTSEVKRVAPKRQSDPSIRSVAVEPEEWLSIARKPEASSVPSLVTALSVPTIPPPKSHA
VGALNTRSASSPVPGSSHFPHQKASLEHMASMQYPPILVTNSHGTPISYTEQYPKFESMG
DHGYYSMLGDFSKLNINSMHNREYYVADADQGMYVRNPNLCPDSCMSHSRNDTYSSYNNL
YLAVADAHPEGSLKLHRSASQNRLQPFSHGYHEALTRVQSYGSEDSKQAPHKQSVSHLAL
HAQHPATGAHSSSPGDYPIPPNIHPGATSQPGRALVMTRMDSISDSRLYESNPMRQRRPP
LCREQHASWDPLPCATDSYGYHSYPLSNSLMQPCYEPVMVRSVPEKMEQLWRNPWVGMCN
DSREHMIPEHQYQTYKNLCNIFPSNIVLSVMEKNPHTADAQQLAALIVAKLRAAR
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgacggccacagctgcagtggagacaccaaaaatggagaagaatgcctccaaggaagaa
aagcaacaacctaaagaggacaacacagagcaaggcaatgttgattctgaagagtgggtg
agctctgagagtgaccttgaacagatgaaccttaaaagccatagcaacaacagctgccaa
tctggaaatgttcagttgaagaaaaaggagatgcactccaagccccaccgccagctctgc
cgatcaccctgcctggattgccctagcttctcccaaagcagcattttacatgacagcaaa
ctcgacttggagaaggaataccaagccaagatggattttgctctaaagctgggctatgct
gaagaacagatccaatctgtgctgaataagctgggccctgaatcacttattaatgatgta
ttggcagagcttgtcagacttggaaacaaaggagactcagaagggcaggtcaatttgagt
ctattagggccccgtgggcctagctccagagagatcgcaagccctgaattgtctcttgaa
gatgaaatagacaatagtgacaatttgaggccaattgtcattgatggaagtaatgtggca
atgagccatggaaataaagaagaattctcctgcagaggaatacaacttgcagtagattgg
tttctagataagggccataaagatatcactgtatttgttcctgcctggagaaaggaacaa
tctcgccctgatgcaccaattacagatcaagatatattacgtaaactagagaaggagaag
attcttgtcttcacaccatccaggagggttcagggcagaagggttgtctgctacgatgac
cggttcatagtgaaattggcttttgattctgatggcatcattgtgtccaatgataactat
cgagaccttcaagttgaaaagccagaatggaagaagtttatagaggagcggttgctgatg
tattccttcgtaaatgacaaatttatgcctccagacgatcctttaggacgccatggcccc
agccttgaaaattttctaagaaagaaacctgttgttcctgagcataagaagcaaccgtgt
ccttatggcaaaaaatgcacctatggccacaaatgcaaatattaccatccggagcgggcc
aaccaaccccagcgttcagtggcagatgagcttcgcatcagtgccaaattgtccaccgtg
aaaaccatgagtgaaggcaccctggccaagtgtggcacagggatgtctagtgccaaaggt
gaaatgacctcagaggtaaaacgcgtggcccccaagcgccaatcagatcccagcatccgg
tctgtggctgtggagcctgaggaatggctgtccattgcccgtaagcctgaggccagctct
gtcccctcacttgtgactgccctaagcgtccccacaatcccaccccctaaaagccatgca
gtgggtgcactgaatactcgttcggccagcagcccagtgccaggatcctcccattttcct
caccagaaggcctcactggagcacatggccagcatgcagtatccgcccatcctagttacc
aacagccatggaactcctattagctatacagagcaatacccaaagtttgagtccatgggg
gaccatggctactattcaatgctaggtgacttctccaaactgaacatcaacagcatgcac
aaccgagagtactatgtggctgatgcagaccagggcatgtatgtccggaatcccaacctc
tgtcctgacagttgtatgagccatagtaggaatgacacctattcctcttataacaacttg
tatttggctgtagctgatgcccacccggaaggcagtttgaagctgcaccgctcagcatct
cagaaccgtcttcagcctttttctcatggttaccatgaagccttaacgagagtacagagc
tatggctcagaggattccaagcaagcaccccacaagcagtcagtttcccacttagctctg
catgcccaacacccagcaactggagcacactctagctctcctggagactatcctataccc
cccaacatccatcctggggcaacctcccagccaggccgggctctagtgatgactcgaatg
gacagcatttctgactcccgcctatatgagagcaaccccatgcggcaaagacgacctcct
ctgtgccgggaacagcatgccagctgggatccacttccctgtgcaactgactcctatggc
taccactcctatcccttaagtaatagcctcatgcaaccatgttatgagccagtcatggta
aggagtgtgcctgagaagatggagcagctctggaggaatccttgggttggaatgtgtaat
gattccagggagcatatgatcccagagcaccaatatcagacctacaagaatctctgcaat
attttcccatctaacatcgttctttcagtgatggaaaagaatccccacacagcagatgcc
cagcaactggcagccttgattgttgccaagcttcgggctgcacgttga
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