KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125343593
Entry
125343593         CDS       T08928                                 
Symbol
Rab39b
Name
(RefSeq) ras-related protein Rab-39B
  KO
K07925  Ras-related protein Rab-39B
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04140  Autophagy - animal
plop05014  Amyotrophic lateral sclerosis
plop05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:plop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    125343593 (Rab39b)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    125343593 (Rab39b)
   05022 Pathways of neurodegeneration - multiple diseases
    125343593 (Rab39b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:plop04131]
    125343593 (Rab39b)
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:plop04031]
    125343593 (Rab39b)
Membrane trafficking [BR:plop04131]
 Autophagy
  Other autophagy associated proteins
   Rab GTPases
    125343593 (Rab39b)
GTP-binding proteins [BR:plop04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab39/42 [OT]
    125343593 (Rab39b)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RsgA_GTPase Gtr1_RagA GTP_EFTU TniB
Other DBs
NCBI-GeneID: 125343593
NCBI-ProteinID: XP_048192047
LinkDB
Position
X:234981..240628
AA seq 213 aa
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAPVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVL
VGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEI
TIQEGWEGVKSGFVPNVVHSSEEVVKSERRCLC
NT seq 642 nt   +upstreamnt  +downstreamnt
atggaagccatctggctgtaccagttccggctcattgtcatcggggattccacggtgggc
aagtcctgcctgatccgccgcttcacggagggccgctttgctccggtttcagaccccacc
gtaggggtagattttttctcccgcttggtggagatcgagccaggaaaacgcatcaagctc
cagatctgggatactgcgggtcaagagaggttcagatccatcactcgcgcctactacagg
aactcagtaggtggtcttctcttatttgacattaccaaccgcaggtccttccagaatgtc
catgagtggttagaagagaccaaagtacatgttcagccctaccaaattgtatttgttctg
gtgggtcacaagtgtgacctggatacacagaggcaagtgactcgccacgaagccgagaaa
ctggcagctgcatatggcatgaagtacattgagacgtcagcccgagatgccattaatgtg
gagaaagccttcacagatctgacaagagacatatatgagctggttaaaaggggggagatt
acaatccaggagggttgggaaggtgtgaagagtggatttgtaccaaatgtggttcactct
tcagaagaggttgtcaaatcagagaggagatgtttgtgctag

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