Perognathus longimembris pacificus (Pacific pocket mouse): 125343751
Help
Entry
125343751 CDS
T08928
Symbol
L1cam
Name
(RefSeq) neural cell adhesion molecule L1
KO
K06550
L1 cell adhesion molecule
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04360
Axon guidance
plop04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125343751 (L1cam)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
125343751 (L1cam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125343751 (L1cam)
04090 CD molecules [BR:
plop04090
]
125343751 (L1cam)
04091 Lectins [BR:
plop04091
]
125343751 (L1cam)
Cell adhesion molecules [BR:
plop04515
]
Immunoglobulin superfamily
L1 family
125343751 (L1cam)
CD molecules [BR:
plop04090
]
Proteins
125343751 (L1cam)
Lectins [BR:
plop04091
]
I-type lectins (Siglecs)
125343751 (L1cam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Ig_5
Motif
Other DBs
NCBI-GeneID:
125343751
NCBI-ProteinID:
XP_048192239
LinkDB
All DBs
Position
X:1214458..1241444
Genome browser
AA seq
1254 aa
AA seq
DB search
MVVALRLVWTLLLCSPCLLIQIPDELMEPPVITEQSPRRLVVFPTDDISLKCEARGKPEV
QFRWTKDGIHFKPKEQVGVTVQESPHSGSFNITGNNSFAQRFQGVYRCFASNKLGTAMSH
EIQLMAEGAPKWPKETVKPVEVEEGESVVLPCNPPPSAEPLRIYWMNSKILHIKQDERVT
MGQNGNLYFANVLTSDNHSDYICNAHFLGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPT
NSSSNPVALQGQSLVLECIAEGFPTPTIKWLRPGGPMPADRVIYQNHNKTLQLLNVGEED
DSSEYQCLAENSLGTAQHVYHINVEASPYWLHKPQSHLYGPGETARLDCQVQGRPQPEIT
WRINGISVEELAKDQKYRIHQGTLTISNLQPSDTMVTQCEARNQHGLLLANAYIYVVQLP
ATILTGDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEGGTTVLQDERFFPYANGTLGIR
DLQANDTGRYFCQASNDQNNMTIVANLQVKEATQITQGPHNATEKKGSRVTFTCQASFDT
SLQPRITWRRDGRDLQELGDSDKYFIDDGRLVIHSLDYRDQGNYSCVASTELDEVESRAQ
LLVVGSPGPVPLLELSDHLLTQSQVHLSWSPAEDHNAPIEKYDIEFEDKERAPEKWYSLG
KVPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPASETVLTPEAAPEKNPVDVKGEGN
ETNNMVITWKPLRWMDWNAPGVQYRVQWRPQGTRGLWQEQTVSDPLLVVSNTSTFVPYEI
KVQAVNNQGKGPEPQVIIGYSGEDYPQVSPEIEVIEALNSSAVLVKWLPVDLAQVKGHLR
GYNVTYWWTGSQRKHSKRHVHKGHVVVPANTTRAILSGLRPFSSYHLEVQAFNGRGLGPA
KELSFITPEGVPGHPESLHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYHPLDVRGKEQL
SFDLPDPELRTHNLTNLNPYLRYRFQLQATTSQGPGEAIVREGGTMALSGKPDFGNISAM
AGENYSVISWVPRDGQCNFQFNISFKTPAEGKGSAYLQPQSVSYNQSSYTQKDLQPDTEY
QIELMKERMVLHQMAVKTNGTGRVRLTHPTGFGFTTEGWFIGFVSATILLLLILLILCFI
KRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYRSLESDNEEKAFGSSQPSLNGDIKPLG
SDDSLADYGGSVDVQFNEDGSFIGQYSGKKEKETTGGNDSSGATSPINPAVALE
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggcgctgcggttagtgtggactctgctgctctgcagcccctgcctgctcatc
cagattcctgacgaattgatggagccgcctgttatcaccgagcagtctccgcggcgactg
gttgtcttccccacagacgacatcagcctcaagtgtgaagccagaggcaaaccagaagtg
cagtttcgttggaccaaggatggcatccacttcaaacccaaggaacaagtgggggtgacc
gtgcaagaatcaccccactctggctccttcaacatcacaggcaacaacagttttgcccag
aggttccagggcgtctatcgctgctttgccagcaataagctgggcactgctatgtctcac
gagatccagctcatggctgagggtgcccccaagtggccgaaggagacagtgaaacctgtg
gaggtggaggaaggcgaatcagttgttctaccttgcaaccctccacctagtgcagagcca
ctccggatctactggatgaacagcaagattttgcatatcaagcaggatgaacgagtgaca
atgggccagaatggcaacctctactttgccaatgtactcacctcagacaaccactcagac
tacatctgcaatgcccacttcctgggtacccggaccatcatccagaaggagcccattgac
ctccgggtgaaggccaccaacagcatgattgacaggaagccacgcctgctctttcccacc
aactccagcagcaaccccgtggccttgcagggccaatcattggtcctggagtgcattgcc
gagggcttccccacacccaccatcaagtggctacgtcccggtggccccatgccagcagac
cgtgtcatttaccagaaccacaataagactctgcagctgctgaatgtgggcgaggaggat
gacagcagcgagtatcagtgcctggctgagaactcactgggcactgcccagcatgtctac
catatcaacgtggaggcctccccatactggctacataaaccccagagccatttgtacggg
ccaggagagactgcccgcttggactgccaggtccagggcaggccccaacctgaaatcacc
tggagaatcaacggcatctctgtggaggagctagccaaggaccagaagtaccggatccat
cagggtactctgaccatcagcaacttgcaacccagtgacacaatggtgacccagtgtgag
gcccgtaatcagcatggactcctgctggccaatgcctacatctatgttgtccagctgcca
gctacaatcctcacaggagacaatcagacgtacatggcagttgagggcagcactgcctat
ctgctgtgcaaggcctttggagcccctgtgcccagtgtccagtggctggatgagggaggg
accacagtacttcaggacgaacggttcttcccctatgccaatgggaccctgggcatccga
gacctccaggccaatgacactggacgctatttctgccaggcttccaatgaccagaacaat
atgactattgtggctaacctgcaggttaaagaagcaactcagatcacacaggggccccac
aacgcaacggagaagaaaggctcaagggtgacatttacgtgtcaggcctcctttgatacc
tcattgcagccccgcatcacctggcgtagggatgggagagacctccaggaacttggggac
agtgacaagtacttcatagacgatggacgcctggtcatccacagcctggactacagagac
cagggcaactacagctgtgttgccagcactgagctggacgaggtggagagcagggctcag
ctcttggtcgtggggagtcctgggccggtgcctctgctggagctgtctgatcatctgcta
acacagagccaggtgcacttgtcatggagccctgctgaagaccataatgcccccattgag
aagtatgacattgaatttgaggacaaggaaagagcacctgagaaatggtacagtctgggc
aaggtgccagggaatcagacctctaccaccctcaagctgtcgccatatgtacactacacc
tttcgggtcactgccatcaacaaatatggccctggggagcctagcccagcctctgagact
gtgcttacccctgaggcagccccagagaagaacccagtggacgtgaaaggagaagggaat
gagaccaacaatatggttatcacttggaagcccctgcggtggatggattggaatgccccg
ggggttcagtaccgcgtgcagtggcgcccacagggcactcgagggctctggcaggagcag
actgtgagcgaccctctcctggtggtttctaacacatccacctttgtgccttatgagatc
aaggtccaggcagtgaataaccagggcaagggccctgagccccaggtcatcattggctac
tcgggagaggactacccccaggtgagccctgagatagaagtcatcgaggccctcaactca
agcgctgtgctggtcaagtggttgcctgtggaccttgcacaggtcaagggtcacctccgc
ggatacaatgtgacatactggtggacaggcagtcagaggaagcacagcaagcggcatgtc
cacaaaggccacgtggtggtgcctgccaacactacccgagccatcctcagcggcctgcgg
cccttcagctcctaccacctggaggtgcaagccttcaatgggcggggcttggggcctgcc
aaggagctgtccttcatcaccccggagggagtgcctggccaccctgagtcattgcatctg
gagtgccagtcagacaccagcctgctgctgcactggcagcccccactcagccacaatggt
gttctcacaggctatgtgctgtcctaccaccccttggatgtgagaggcaaggagcagtta
tccttcgaccttccagacccagaacttcgcacacataacctgaccaacctcaacccctac
ctgcggtaccgcttccagcttcaggccaccacaagccagggccctggggaggccattgtt
cgagaaggaggcaccatggccctgtctggaaagccagattttggcaacatctcagctatg
gcaggtgagaactacagcgtcatctcctgggttcctagggacggccagtgcaacttccaa
ttcaacatctcgttcaaaactccagcagaagggaaggggagtgcttacctccagccacag
tctgtcagctacaaccagagctcgtacacacagaaggacctgcagcctgacaccgagtat
cagatcgaactgatgaaggagagaatggtcctgcaccagatggctgtgaagaccaacggc
actggccgagtgagactcactcatcccactggctttggcttcaccaccgagggctggttc
attggctttgtcagtgccaccattctcttgctcctcattttgctcatcctctgctttatc
aagcgcagcaagggtggcaaatattcagtgaaagacaaggaggacacccaggtagactcg
gaagcccggccgatgaaagatgaaacctttggtgaatacaggtccctggagagtgacaat
gaagagaaggcctttggcagcagtcagccatctctcaatggagacatcaagcccttgggc
agtgacgacagcttggccgattatgggggcagtgtggatgtgcagttcaatgaggatggc
tccttcattggccagtacagtggcaagaaagagaaggagacaacaggaggcaatgacagc
tcaggggccacctctcccatcaaccctgctgtggccctagaatag
DBGET
integrated database retrieval system
