Perognathus longimembris pacificus (Pacific pocket mouse): 125343871
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Entry
125343871 CDS
T08928
Symbol
Atg4a
Name
(RefSeq) cysteine protease ATG4A
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04136
Autophagy - other
plop04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125343871 (Atg4a)
04136 Autophagy - other
125343871 (Atg4a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plop01002
]
125343871 (Atg4a)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125343871 (Atg4a)
03029 Mitochondrial biogenesis [BR:
plop03029
]
125343871 (Atg4a)
Peptidases and inhibitors [BR:
plop01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
125343871 (Atg4a)
Membrane trafficking [BR:
plop04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
125343871 (Atg4a)
Mitochondrial biogenesis [BR:
plop03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
125343871 (Atg4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
125343871
NCBI-ProteinID:
XP_048192408
LinkDB
All DBs
Position
X:complement(33638852..33684210)
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AA seq
398 aa
AA seq
DB search
MESVLSKYENQITIFTDYLEEFPDTDDLVWILGKQHLLKTEKAKLLSDISARLWFTYRKK
FSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWSWQKQKEQPKEYQRILQCFLD
RKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIE
DIKKMCCVPPLGANAAGENPPDFVTASNQSQGISAFCPAWKPLLLIVPLRLGINQINPVY
VDAFKECFKMPQSLGALGGKPNNAYYFIGFLGNELIFLDPHTTQTFVDTEENGTVDDQTF
HCLQSPQRMNILNLDPSVALGFFCKEEKDFDSWCSLVQKEILKENLRMFELVQKHPSHWP
PFVPPSKPEVTTTGAEFIDSTEQLEDFDLEEDFEILSV
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagttttgtccaagtatgaaaaccagattactatattcactgactacctagaa
gaatttccagatacagatgacctagtatggatcctgggaaagcagcacctccttaaaaca
gaaaaagctaagctgttgtctgatataagtgctcgcctatggtttacgtacagaaagaaa
ttttcaccaattgggggaacgggcccttcatctgatgctggctggggatgcatgctacgc
tgtggacagatgatgttggctcaagctctcatttgtagacatttgggaagggactggagc
tggcagaaacaaaaagaacaacccaaagaataccaacggatcctacaatgcttcttagat
agaaaagactgttgctattctatccaccaaatggcacaaatgggtgtaggagaagggaaa
tcaattggcgaatggtttggaccaaatacagttgcacaggtgttaaaaaaacttgcttta
tttgatgaatggaattccttggctgtttatgtttcaatggataacacagtggtcattgaa
gatataaaaaaaatgtgctgtgttcctcccttgggtgccaatgcagctggtgagaatcct
cctgattttgtgactgcttctaaccagagtcaaggcatctctgccttctgcccagcctgg
aaacccctgctgctcattgtgccccttcgtctgggcataaaccaaatcaatcctgtgtat
gttgatgcattcaaagagtgttttaagatgccacagtctttaggggcattaggaggaaaa
ccaaataacgcctattatttcataggattcttaggtaatgagctcatcttcctggaccct
catacaactcagacctttgttgacactgaggaaaatggaactgttgatgaccagactttt
cattgcctgcagtccccacagcgaatgaacatcctcaacttggatccatctgttgcactg
ggatttttctgcaaagaagaaaaagactttgatagctggtgtagccttgttcagaaggaa
attctgaaggaaaatttaaggatgtttgaattagttcagaaacatccatcacactggcct
ccatttgtgcctccatcgaagccagaagtgacaaccactggggcagaattcattgattct
actgaacaactggaggactttgacctggaagaagattttgagattctaagtgtgtag
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