Perognathus longimembris pacificus (Pacific pocket mouse): 125343882
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Entry
125343882 CDS
T08928
Symbol
Gabre
Name
(RefSeq) gamma-aminobutyric acid receptor subunit epsilon
KO
K05185
gamma-aminobutyric acid receptor subunit epsilon
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04080
Neuroactive ligand-receptor interaction
plop04082
Neuroactive ligand signaling
plop04519
Cadherin signaling
plop04723
Retrograde endocannabinoid signaling
plop04727
GABAergic synapse
plop05032
Morphine addiction
plop05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125343882 (Gabre)
04082 Neuroactive ligand signaling
125343882 (Gabre)
04519 Cadherin signaling
125343882 (Gabre)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
125343882 (Gabre)
04723 Retrograde endocannabinoid signaling
125343882 (Gabre)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
125343882 (Gabre)
05033 Nicotine addiction
125343882 (Gabre)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plop04040
]
125343882 (Gabre)
Ion channels [BR:
plop04040
]
Ligand-gated channels
GABA-A
125343882 (Gabre)
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
125343882
NCBI-ProteinID:
XP_048192419
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All DBs
Position
28:2461551..2480249
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AA seq
574 aa
AA seq
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MLPKVLLALLNIFMILQARLGGHLTTLNNKTSARDDFVYGPQPKPQPRPQPQPKPQPQPK
PQPQPPQPHPQPQPQPRPQLLRHPHPQPQPLPQPQPQPQPQPQPQVNHLGRKLLSEETML
NVTETARTGSKLPEASRILNTILGHYDHKLRPGIGEKPTVVTVEVSVNSLGPLSILDMEY
TIDIMFYQTWYDERLRFNDTFESLVLNGNVVSQLWIPDTFFRNSKRTQEHEITMPNQMVR
IYKDGKVLYMIRMTIDAGCSLHMLKFPMDSHSCPLSFSSFSYTESEMIYQWDNFKLEINE
KNSWKLFQFDFTGLSNKTEIISTPAGDFMVMTFFFNVSRRFGYVAVQNYVPSSVTTMLSW
VSFWIKKESAPARASLGITSVLTMTTLGTFSRKHFPRVSYITALDFYIAICFVFCFCALL
EFAVLNFLTYNRTKAHASPKLRHPPIAGRAHARTRARARARARARARQQQEVFVCEIVTS
EGSDGEERLSCSVQRTPSPGSPQRSRSPYSKVACYECCKGFKKYFCMMPDCEGSTWQRGR
LCIHIYRLDNYSRVVFPVTFFFFNVVYWLVCLNL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccaaagttctcctggccctcctgaatatattcatgattctgcaggccaggctc
ggaggacatctgactacactgaataacaagaccagtgctcgtgatgatttcgtctatggc
ccccagcctaagccccagcctaggccccagccccagcctaagccccagcctcagcctaag
ccccagcctcagcctcctcagcctcaccctcagccccagccccagccccgccctcaactt
ctgcgtcaccctcaccctcaaccccagcccctgccccagccccaaccccaaccccagccc
cagccccagccccaggtcaatcatctgggaaggaagctcctgtctgaagaaacaatgctg
aatgttaccgagactgcacgcacaggtagcaaactgccagaagcttctcgaatcctgaac
accatcctgggtcactatgaccacaagctgcgtcctggcattggtgagaagcccactgtg
gtcactgttgaggtctctgtcaacagccttggccccctttccatcctggacatggaatat
acaattgatatcatgttctaccagacctggtatgatgaacgccttcgtttcaatgacacc
tttgagtccctcgttttgaatggcaacgtggtgagccagttgtggatcccggataccttc
tttaggaattctaagaggacccaagagcatgagattaccatgcccaaccagatggttcgc
atctacaaggatggcaaggtgttatacatgattaggatgaccattgatgcgggatgttca
ctccacatgctcaaatttccaatggattctcactcttgccctctgtctttctctagcttt
tcctatactgagagtgagatgatctaccagtgggacaatttcaagcttgaaattaatgag
aagaactcctggaagcttttccagtttgattttactggacttagcaacaaaactgaaatc
atctcaaccccagctggtgacttcatggtcatgacttttttcttcaatgtgagccggcgg
tttggctatgttgctgttcaaaactacgtcccctcttctgtgactacgatgctatcctgg
gtttccttttggatcaagaaagagtctgctccagctagggcctctctagggatcacctct
gtactcaccatgactacactgggcaccttttctcgtaagcatttcccgcgtgtttcctat
atcacagccttggatttctacattgcgatttgcttcgtcttctgcttctgtgctctgttg
gagtttgctgtgctcaacttcctcacctataaccggaccaaagcccatgcgtctccaaaa
ctccgccatcctccgatcgctggccgtgcccatgcccgtactcgtgctcgtgcccgcgcc
cgcgcccgtgcccgtgcccgccagcagcaggaagtgtttgtgtgcgagattgtcacctct
gagggaagtgatggagaggaacgcctgtcttgctcggtccagcgcacccccagcccaggt
agcccccagcgttcccggagcccttattccaaggtcgcttgctatgagtgctgcaagggt
ttcaaaaagtatttctgcatgatgcctgattgcgagggcagcacctggcagcgaggtcgc
ctctgcatccacatctaccgcctggataattactcacgagttgttttcccagtcactttc
ttcttcttcaatgtggtctactggcttgtctgccttaatctgtag
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