Perognathus longimembris pacificus (Pacific pocket mouse): 125344107
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Entry
125344107 CDS
T08928
Name
(RefSeq) SNW domain-containing protein 1-like
KO
K06063
SNW domain-containing protein 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03040
Spliceosome
plop04330
Notch signaling pathway
plop05169
Epstein-Barr virus infection
plop05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125344107
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125344107
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
125344107
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
125344107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plop03041
]
125344107
Spliceosome [BR:
plop03041
]
Complex B
Other components
Prp19-related factors
125344107
Complex C
125344107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
125344107
NCBI-ProteinID:
XP_048192668
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All DBs
Position
2:complement(46177036..46178649)
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AA seq
537 aa
AA seq
DB search
MVLTACLPAPTGLSQNQTEAREKARCHGPWQASLASSRREPPPYGLRKGWTPCCLEDFGD
GGAFPEIPVAQWPLDMGRGKTRANALAIQVDFRGRLQYQAIARQGQPKARVIYSQHADLV
PKEVTNAEDPDLRRPDQEAIQETTAKTRAALEKLVWQKVAAAMPAGEAERPAPAQYVRYT
PSQQGEAWNSGAKQRVIRVVDMQKDPMEPPRFKINQKIPRPPPSPPVPVLRSPSRRMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLATGARGLQAVCIKDTFAKLAQALYIADRKARE
AVEARAQVERKMAHKAKQKHEERLRELAQRTRESRAGSKARVDREDGEPQERAGIRQERQ
KDRRCDRNLYRAAPKRTWKRQHIEQRDITEVIALGVPNPGTSNEGQYYDPRLFNQPKGMD
SGFAGGEDDFYNLYGHSWRGAEPMSHTIYRPRPDLDKDMYGNDLEARMETHRFFPCKEFS
DSEQRQGRLEGPVEFEEDPFGLDKFLLEAKRQGGSKRPSERSQAQEQEHGGKKRRKA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcaccgcatgcttgcctgcgcccactgggctatctcagaaccaaactgaagcc
agagagaaggctagatgtcacggaccctggcaggcctccctggcctcctcccgcagagaa
cctcccccatatgggctccgcaaaggctggacaccctgctgcttagaggactttggagac
ggaggcgcgttcccagagatccctgtggcccagtggcctctggatatgggtcgcgggaaa
acaagggccaatgcactggccattcaggtcgatttccgagggcgactccaataccaagca
attgctcgacaaggacagccaaaagccagggtcatttacagccagcacgctgacctggtc
ccaaaggaggtgaccaatgcagaggatccagaccttcggagacccgaccaagaggccatt
caagagaccacagcaaagactcgggcagccttagagaagcttgtgtggcagaaggttgct
gcagccatgccggctggagaagctgagagaccggcccctgctcagtatgtgcgatacacg
ccctctcaacaaggagaggcatggaactcaggggctaagcagagggtgattcgggtggtg
gacatgcagaaagatcccatggagcctccgagattcaagatcaatcagaagattccccgg
ccaccgccttctcctcctgtacctgtgctgcggtccccaagtcgacggatgactgtgaag
gaacaacaagagtggaagatccctccttgcatttccaactggaaaaatgcaaagggttat
acaattccactagacaagcgtctggccactggtgcgagaggactccaggcggtgtgcatc
aaggatacctttgctaagctggcccaagctctctatattgctgaccgcaaggctcgggag
gctgtcgaggcccgggcccaagtggagaggaagatggctcacaaagcaaaacagaaacat
gaggagagactgagagagctggcccaaaggaccagggagagcagagctgggagcaaagcc
cgagtggacagagaggatggggagccacaggagagggcagggatccgacaggagaggcag
aaagacaggcggtgtgaccgcaatctttacagggcagctccgaagaggacgtggaaacga
cagcatattgagcaacgagatatcactgaagtcattgctctcggtgtccccaatcctgga
acctccaatgaaggtcagtattatgacccaaggctcttcaaccagcccaagggtatggac
agtggctttgccggtggagaagatgacttttacaacctttatggccactcctggagaggg
gctgaacccatgtcccatactatctataggcccaggccagatctggacaaggacatgtat
ggcaatgacctagaagccagaatggagacccacaggttctttccatgcaaagagttttcc
gattcagaacagaggcagggaagattagaaggacctgttgagtttgaggaagatcctttt
ggtttggacaagtttctgctagaagcaaagcggcaaggcggctcaaaaagaccctcggag
aggagccaagcccaggaacaggagcatggaggcaagaagaggaggaaggcatag
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