Perognathus longimembris pacificus (Pacific pocket mouse): 125344157
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Entry
125344157 CDS
T08928
Symbol
Aff2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plop03021
]
125344157 (Aff2)
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125344157 (Aff2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
125344157
NCBI-ProteinID:
XP_048192720
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Position
X:complement(4268453..4740006)
Genome browser
AA seq
1309 aa
AA seq
DB search
MDLFDFFRDWELEPQCHYEQDRSALKKREWERRNQEVQQEDGLFSSSFDLFGEPYKVAEY
TNKGDALANRVQNTLGNYDEMKDLLTSHSNQNHLVGIPKNSVPQTPINKNESSFFPEQKN
RMIPPHQDNTPSSAPMPPPSVVILNSTLIHNNRKPKPEWSRDSQNPSTGPASQASSQPNK
MQTSTQDQPQARLEDFFVYPAEQPQTGAVEESNPSAKEDRNPNSGGEDAFKEIFQSNSPE
ESEFTVQTPGSPLVASSLLAPSSGLSIQNFPAGLYCKSSMGQQKPTAYVRPMDGQDQTPD
ISPTLKPSIEFENSFGNLSFGSLLDGKPNTASSKTKLPKFTILQTNEVSLPSDPSCVEEI
LREMTHSWPAPLTAMHTPGHSDQNSFSIPGQESQHLTPGFTLQKWSDPTSRASTKSVSFE
LMLEDDLKLSSDEDDLEPVKTLTTQCTATELYQAVEKAKPKNNPINPPLTTLQPPPTVPV
NGGSGSSSESESSSESDSDTESSTTDSESNEAPRVSTPEPEPPSTNKWQLDKWLNKVTSQ
NKSFICGQHETPMETISLPPPIIQPMEVQIKVKSNPSQVPPEPKERPLLSLIREKARPRP
TQKTPETKAMKHKLSTTIDTASQRTIGKKQPKKVEKNTSIEEFTWPKPNITSSTPKERES
VEIPDPPRSRNKATAHKPVPRKEPRAHIPLATEKKKYRGPSKIVPKSREFIESDSSTSDS
NTDQEETLQIKVLPPCIIPRGNNTKSKDASAANLTLSSLISNSSNNPSNNKEEPALSPIP
SMQTELLSPLRDHENLKNLWVKIDLDLLSRVPGHNSLSAAPTKPDHKETASKPKRQTSAT
AVEKPAIKGKRKHKPAEVAEKIPEKKQRLEDASSICLLPPCISPAPPHKPPQTRENNSSR
RANRRKEEKLFPPPLSPLPEDPPRRRNVSGNNGPFSLDKNISMTGQITSTKPKRNEGKFC
ATFKGISVSEIDTPKKNASATVTLTSTAIATVTATAIVTATVTATATATATSTTTTTTTT
ISTITSTITTGLMDSSHLEMTSWAALPLLSSSSTNVRRPKLTFDDSVHNADYYMQEAKKL
KHKADALFEKFGKAVNYADAALSFTECGNAMERDPLEAKSPYTMYSETVELLRYAMRLKN
FASPLASDGDKKLAVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFKQNASKVAQIPSP
WVGNGKNTPSPVSLNNVSPINAMGNCNNGPVTIPQRIHHMAASHVNITSNVLRGYEHWDM
ADKLTRENKEFFGDLDTLMGPLTQHSSMTNLVRYVRQGLCWLRIDAHLL
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggatctattcgactttttcagggactgggagttggagccgcagtgtcactatgaacaa
gaccgtagtgcacttaagaaaagggaatgggaacggaggaatcaagaagttcagcaagaa
gatggtctcttctcttcaagctttgatctttttggggagccctacaaggtagctgaatat
acaaacaaaggtgatgcccttgccaaccgagtccagaacacgcttggaaactatgatgaa
atgaaggatttgctaactagccattctaatcagaatcatctagtgggaatcccaaagaat
tctgtgccccagacacccatcaacaaaaatgaatcgagcttttttccagaacaaaagaac
cgaatgatccccccacaccaggataataccccttcctcggcaccaatgcctccaccttct
gttgtgatactgaattccactctaatacataacaacagaaaaccgaaacctgagtggtca
cgagatagtcaaaatcctagcactggaccagcaagtcaagccagcagccagccaaacaag
atgcagacttccacacaggaccagcctcaagccagattggaagacttctttgtgtatcca
gctgaacagccccaaacaggtgcagttgaagagtcaaacccatctgcaaaggaagacaga
aaccccaattctggtggagaagatgctttcaaagaaatttttcagtccaactcacctgaa
gaatctgaatttacagtgcaaacacctggctctcccctagttgcttcatctttactcgct
cccagcagtggcctttccattcagaacttccccgcagggctttactgcaaatcgagcatg
ggccaacagaagccaactgcatatgtaagacccatggatggccaggaccagacaccagac
atctctcccacactgaaaccttccattgaattcgagaacagctttgggaatctgtcattt
gggtccctcttggatggaaaacccaatacagccagttcaaagactaaactgcccaagttc
accatccttcaaacaaatgaagtaagccttcccagtgatccaagctgtgttgaggaaatc
ttgcgtgagatgacccattcctggcctgctcctctcactgccatgcatactcctggacac
tctgaccagaattcattttccatcccaggacaggaatctcagcatttgaccccaggattc
accttacaaaagtggagtgacccaactagcagagcttcgacgaagtcagtatcatttgag
ttgatgcttgaggatgacctgaagctgagcagtgatgaagatgaccttgagcctgtgaag
accttgaccactcagtgcacagccactgagctgtaccaggctgttgaaaaggcaaaacct
aagaataatcccataaatccacccttgaccaccctccagcccccgcctacagtgccagtc
aatgggggatccggcagctctagtgagtcagaaagcagctctgaatcggactccgacact
gaaagcagcaccactgacagtgaatccaatgaggcacctcgcgtgtccactccagagcct
gagccaccctcaaccaacaagtggcaactggataagtggcttaacaaagtaacatcccag
aacaagtcatttatttgtggccaacatgaaacacccatggagactatttctctgcctcct
ccaatcatacaaccaatggaagtccagatcaaagtgaaatcaaaccccagccaggtcccg
cctgaacccaaagaacggcctctcctgagtctcattagggagaaagcccgtccacggccc
acccagaaaactccagaaacaaaggctatgaagcataagttatccaccactattgacaca
gcttctcaaaggacaattgggaagaaacagcccaaaaaggttgagaaaaacaccagcatt
gaggagtttacctggcctaaaccaaatattaccagcagtactcccaaagaaagagaaagt
gtggaaattcctgacccaccaagaagcaggaacaaagccactgcacacaaaccagtccct
aggaaagaaccaagggctcacatccccttagctactgagaagaaaaagtatagaggccca
agcaagatcgtgccaaagtctcgggaattcattgaatcagattcgtctacatctgactcc
aatacagaccaagaagagaccctgcagatcaaagtcctgcctccttgtatcattcctaga
ggtaataataccaaatccaaggatgcctctgctgccaacctaactctcagcagcttgatc
agcaacagcagcaacaacccatccaacaataaagaagagccagctttgtcgcccattccg
tccatgcaaactgagcttctgtcccctctacgagatcatgagaacctgaaaaacctctgg
gtgaaaattgaccttgacttactttcgagagtacctggccacaactcactctcagcggca
cccaccaagcccgaccacaaggagactgcctcaaaacccaagcgtcaaacaagtgccaca
gctgtggaaaaaccagccattaaaggcaagcggaagcacaagccagcagaagttgcagag
aaaatccctgagaagaagcaacgcctggaggatgccagttctatctgcctgcttcccccc
tgcatctcaccagccccaccccacaagcctccccagactagagaaaataattcatctaga
agagcaaatagaagaaaagaagaaaagctttttcctcctcccctttctccactgccagag
gaccctccacgtcgcagaaatgtcagtggcaataatggtcctttcagtctagacaaaaac
atctccatgactggacaaatcacctctacaaaacctaagagaaatgaaggcaaattctgt
gctactttcaagggaatatctgtaagtgagatagacactccaaaaaagaatgcatctgcc
acagttactctcaccagcactgctattgccactgtcactgctactgccattgtcactgcc
actgtcactgctactgctactgccactgccacgtccaccaccacaactaccaccaccact
atttccaccatcacctctacaatcactactggccttatggatagcagtcacctggagatg
acgtcctgggcagccctgcccctcctatccagcagcagtactaatgtccggagacccaag
ctcacttttgatgactcggttcacaatgctgactattacatgcaagaagctaagaagctg
aagcacaaagctgatgcactgtttgagaaatttggcaaagctgtgaattacgctgatgcc
gctctgtccttcactgaatgtggcaatgccatggaacgtgaccctctggaggccaagtcc
ccctatactatgtattccgagactgtggagctcctcaggtatgcaatgaggctgaagaac
tttgcaagccccttggcttcagatggagacaaaaagctagcagtattatgctaccgatgt
ttatcacttctctacttaagaatgtttaaactgaagaaagaccatgctatgaagtactcc
agatcactgatggagtattttaagcaaaacgcttcaaaagttgctcagataccgtctcca
tgggtaggcaatggaaagaacactccatccccagtgtctctcaacaatgtctctcccatc
aatgcgatgggaaactgcaacaatggccctgtcaccatcccccagcgcattcaccacatg
gctgctagccatgttaacatcacaagcaatgtgttgcggggctatgaacactgggacatg
gctgacaaactgacaagagagaacaaagaattctttggtgatctggacacgttgatgggg
cctctgacccagcacagcagcatgactaatcttgtccgctacgttcgccagggactgtgt
tggctgcgcattgatgcccatttgttgtag
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