Perognathus longimembris pacificus (Pacific pocket mouse): 125344166
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Entry
125344166 CDS
T08928
Symbol
Pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125344166 (Pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plop03032
]
125344166 (Pola1)
Enzymes [BR:
plop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125344166 (Pola1)
DNA replication proteins [BR:
plop03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
125344166 (Pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
125344166
NCBI-ProteinID:
XP_048192741
LinkDB
All DBs
Position
X:complement(97723843..98024771)
Genome browser
AA seq
1466 aa
AA seq
DB search
MAPVYGDDGDVEPSAVSEDSGSLAASRARREKKSKKGRQEALERLKKAKAGEKYKYEVED
FTSVYEEVDEDQYSKLVQARQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDTSEKGKDG
RAHKKDKKTERKPAVTKPNNIRSMFIASAGKKTADKAVDLAKDDLLGDILQDLSTETSQI
TPPPVIISKKKRSTGASLNPFSVLTPKVIPPGKTTFPASRKELSLTPVPFKPAEFAGDPV
HSDRPEDEESGAIEFEDDDFAEPMDTQKVDMEPVAAKTWDQENEPTDGVKPESDPRKGTT
SCLGNFLPDVSCWDIDLEDDSNFSAQEVQVDSSHLPLVKGADEDEVFQFYWLDAYEDQYS
QPGVVFLFGKVWVDSAKTHVSCCIMVKNIERTLYFLPREMRIDLNTGNETGAPVTMKDIY
DEFDESIAAKYKIMKFKSKTVEKNYAFEIPDVPEKSEYLEVRYSAEMPQLPQGLKGETFS
HVFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNQPISWCKFEVLALKPDFVNVIKDVGP
PPLVVMSFSMKTMQNVKNHQNEIIAMAALVHHHFELDKAPPQPPFQSHFCVVSKPMDCIF
PYAFNEVIKEKNVKVEVAATERTLLGFFLAKVHKIDPDVIVGHNIYGFELEVLLQRINVC
KVPHWSKISRLKRSSMPKLGSRSGFGERNATCGRMICDVEISAKELIHCKSYHLTELVQQ
ILKTERVVIPTENVRNMYSESSHLLYLLEHTWKDARFILQIMCELNVLPLALQITNIAGN
IMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQNFRKPQQKLGDEDEEFDGDTHKKGRKK
AAYAGGLVLEPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASEAQKSAEDGEQE
EPIPELPNSNLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDIRQKALKLTANS
MYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDSIMINTNSTNL
EEVFKLGNKIKNEVNKLYKLLELDIDGIFKSLLLLKKKKYAALVVEPTSDGNYITKQELK
GLDIVRRDWCDLAKDTGSFVIGQILSDQSRDTIMENIQKRLIEIGENVLNGSIPVNQFEI
NKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVICQDGSNLSASQRAYAP
EQLQKQDNLTIDTQYYLAQQIHPVVSRICDPIDGIDAVLIASWLGLNTSQFKVYHYHKDE
ENDALLGGPAQLTDEEKYKDCEKFKCPCPMCGTENIYDTLFDGSGTDMEPSLYRCSNIDC
NASPLSFMVQLSNKLITDIRQFIQKYYDGWLICEEPTCRNRTRHLSLQFSRNGPTCPACE
KSILQPEYSDKSLYTQLCFYRYIFDVDYALEKFADHEKDKLRKQFFPQKVQDDYRKLKNT
VEQFLTMSGYSEVNLSKLFADCAMRS
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgtacggtgacgacggtgatgtggagccaagtgctgtgtcagaagattca
gggagtcttgcagcctctcgtgcccggagagaaaaaaaatcaaagaaagggcgccaggaa
gctctagaaagactgaaaaaggctaaagctggtgagaagtataaatatgaagtcgaggac
ttcacaagtgtttacgaagaagttgatgaagaccagtattcaaagctggtgcaggcacgc
caggatgatgactggatcgtggatgacgatggcattggctatgtggaagatggccgagag
atttttgatgatgaccttgaagatgacgctcttgacaccagtgaaaaaggaaaagatggc
agagcacacaaaaaagacaagaaaactgaaaggaaacctgcagtgacaaaaccaaacaat
atcaggtcaatgttcattgctagtgctggaaagaaaactgcagataaagcagtggacttg
gcaaaagatgatttgctaggtgacattctacaggatctgagcactgagacatctcaaata
actcccccacctgtaataatatcaaagaagaaaagatccactggagcttcactgaatcct
ttctctgtgcttacccctaaggtaattcctccagggaaaaccacttttcctgcctccagg
aaggagctatcattaactcctgttcctttcaaacctgctgagtttgctggagatccggtg
cactcagaccgtccagaagatgaggagtcaggtgcaatagagtttgaagatgatgacttt
gctgagcccatggatactcagaaggtggacatggagcctgtggctgccaagacttgggac
caagaaaatgaacccacagatggggtgaaacctgagtcagatcctaggaaagggaccaca
tcttgcttaggaaattttctcccagatgtctcttgttgggacattgatctagaagatgac
agcaatttctcagctcaggaagtccaagtggattccagccacctcccattggtgaaaggg
gcagacgaagatgaagtctttcagttttattggctggatgcttatgaagatcagtacagt
caaccaggtgtggtatttctgtttggcaaagtttgggttgattcagccaagacccatgtg
agctgttgtatcatggtgaaaaacattgagcgaacattgtacttccttcctcgtgaaatg
agaatcgatctaaatacaggaaatgaaactggagctccagttacaatgaaggatatttat
gatgagtttgatgagagtatagcagcaaaatataagattatgaagttcaagtccaagaca
gtggaaaagaattacgcttttgaaatacctgatgttccagaaaagtctgagtacttagaa
gttagatactcggctgaaatgccacagcttcctcagggtttgaaaggagaaacattttct
catgtatttgggaccaatacatccagcttggaactattcttgatgaacagaaagatcaaa
ggaccttgttggcttgaagtaaaaaacccacagcttttgaatcagccaatcagttggtgt
aaatttgaagtactggctttgaaaccagactttgtgaatgtaattaaggatgttggtcct
cctccacttgtagtgatgtcttttagcatgaagacaatgcagaatgtaaagaaccatcaa
aatgagattattgctatggcagctttggttcatcaccattttgaattagacaaagcgccc
ccacagccaccctttcagtcacacttctgtgttgtttctaaaccaatggactgtatattt
ccttatgcttttaatgaagtcatcaaggaaaagaatgtgaaggttgaggttgctgcaaca
gaaagaacactgctaggttttttccttgcaaaagttcacaaaattgatcctgatgtcatt
gtgggtcataatatttatgggtttgaactggaagtgctcctgcagagaattaatgtgtgc
aaagttcctcactggtctaagatcagtcggctgaagcgatccagtatgccaaagcttggg
agccggagtggatttggtgaaagaaatgctacctgtggccgaatgatttgtgatgtggaa
atttcagccaaggaattaattcattgtaaaagctaccatttaacagaactggttcaacag
attctgaaaactgaaagggttgtaattccaacggagaatgtacgaaatatgtatagtgaa
tcttctcatctgttgtacctgttggaacacacctggaaagatgccaggttcattttgcag
atcatgtgtgagctaaacgttcttccattagcattgcagatcactaacatcgctgggaac
attatgtctaggacactgatgggtggacgatctgagcgaaatgaattcttgttgcttcat
gcattttatgaaaacaactatattgtgcctgacaagcagaatttcagaaaacctcagcaa
aaactgggagatgaagatgaagaatttgatggagatacccataagaaaggacgtaagaaa
gcagcttatgctggtggcttggttttggaacccaaagttggtttttatgataagttcatt
ttgctcttggacttcaacagtttatatccttccatcattcaagaattcaacatttgtttt
acaacggtgcaaagagttgcttcagaggcacagaaatctgctgaggatggagaacaagaa
gaaccaatccctgaactacccaattcaaacttagaaatgggcattttgcccagagagatt
cggaaattggtagaacggagaaaacaagtcaaacagctaatgaaacagcaagatttaaat
ccagaccttattcttcagtatgacattcgacagaaggctttgaaactcacagcgaacagt
atgtacggttgcctgggattttcctatagcagattttacgccaaaccactggctgccttg
gtgacatacaaaggaagagagatcttgatgcatacgaaagagatggtgcagaagatgaat
cttgaagttatttatggagatacagattcaattatgataaacaccaatagcactaaccta
gaagaagtattcaaactgggaaacaagataaaaaatgaagtgaataagttgtacaaacta
cttgaattagacattgatggtattttcaagtctctgctactgctgaagaaaaagaaatac
gctgctctggttgtggaaccaacatcagatgggaattatattaccaaacaggagctgaaa
ggattagatatagttagaagagattggtgtgatcttgctaaagacacgggaagctttgtc
attggtcagattctttctgatcaaagtcgggacactataatggaaaacattcagaagagg
ttaatagaaattggagaaaatgtactaaatggcagtatcccagtgaaccagtttgaaatt
aacaaggcattgacaaaggatccccaggattatcctgacaaaaaaagcctccctcatgta
catgttgccctgtggataaattctcaaggaggaaggaaggtgaaagctggagacacggtg
tcatatgtcatctgtcaggatgggtccaacctctctgcaagccagagggcctatgcacct
gagcagctgcagaaacaagacaatttaaccattgatacccagtactacctagctcagcaa
atccacccagtagtgtctcggatctgtgacccaattgatggaattgatgcagtactgatt
gcatcatggttaggacttaatacctctcagtttaaagtttatcactatcataaagatgaa
gagaatgatgctctccttggtggtccagcacagctcactgatgaagagaaatacaaggac
tgtgaaaaattcaagtgtccatgtcctatgtgtggaactgaaaatatttatgatactctc
tttgatggttcgggaacagatatggaacccagcttgtatcgttgcagtaatattgattgt
aatgcttcacctctgtcatttatggtacagctaagcaacaaattgatcacggacattaga
cagttcattcaaaagtactatgatggctggttgatatgtgaagagccaacgtgtcgcaat
cgaactcggcacctttcccttcagttctccagaaatgggcctacttgtccagcctgtgaa
aagtctatacttcaaccagagtattctgacaagtccctgtacacccagctgtgcttttac
cggtacatttttgatgtggactatgcactggagaaatttgccgatcatgagaaagacaaa
ttgaggaagcagtttttccctcaaaaagttcaggacgactacagaaaactcaagaacaca
gtggagcagttcttgacaatgagtggctactctgaagtgaacctcagcaaactcttcgcc
gattgtgctatgagatcctaa
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integrated database retrieval system
