Perognathus longimembris pacificus (Pacific pocket mouse): 125344239
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Entry
125344239 CDS
T08928
Symbol
Apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plop03400
]
125344239 (Apex2)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
125344239 (Apex2)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
125344239 (Apex2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
125344239
NCBI-ProteinID:
XP_048192816
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Position
X:73060892..73088374
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AA seq
540 aa
AA seq
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MRVEGGVWPILERSATRLKRPGSLRMLRLISWNINGIRSPQQGALCQEPGNGAMTTKRIL
DKLDADVVCLQETKVTRDVLTEPLAIVEGYNSYFSFSRSRSGYSGVATFCKDNAAPVAAE
EGLSGLFATQNGNVGCYGNTDEFTLEELRALDNEGRALLTQHKICTLEGKEKTLTIINVY
CPHADPGKPERLTFKLRFYRLLQIRAEALLAAGSHVIILGDLNTAHRPIDHCDAANLECF
EEDPGRKWMDGLLSNQECQAGSQVGPPFIDSFRYFQPKQEKAFTCWSVISGARHLNYGTR
IDYVLGDRTLVIDTFQTSFLLPKVMGSDHCPVGAVLNVSSIPAKQCPPLCTRFLPEFAGT
QLKILRFLVPLEQEPVLEQSVIHFSNQSQVQKRQKKALVRTTRPRPDQAGSRRNQKDLMS
YFQPSSSHSQTSSNLKLPHLPAVAPPVIQKTPEEEVMAKMVEEQAKAKDEKEGQTLFWKS
VLGGPSPVPLCGGHKEPCVMRTVKKSGPNLGRHFYMCARPQGPPSDPSSRCNFFLWRKPS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagagtggaaggcggagtctggccaattttagagcggtctgccactcgtttgaaacgt
cctggatcacttaggatgttgcgtttaataagctggaatatcaatggtatccgaagcccc
cagcaaggggcgttgtgccaggaaccaggcaacggtgccatgaccacaaaacgtattttg
gacaagctggatgccgatgtcgtctgtctccaagagaccaaagtgaccagggatgtactg
acagagccattggctatcgtcgagggctacaactcctatttcagcttcagccgcagccgt
agtggctattctggtgtcgctaccttctgtaaggacaatgctgccccagtggctgctgaa
gaaggcctcagtggtctgtttgccacccagaatgggaacgtaggttgctatggaaacacg
gatgagttcaccctggaagagctccgggctttggataatgagggccgggccctccttaca
cagcataagatctgcacattggaagggaaggagaagactctgacaataatcaatgtgtac
tgcccccatgccgaccctgggaagcctgagcgtctgacctttaagctgcgcttctatcga
ttgctgcagattcgagcagaagcccttctggcagctggcagccatgtcatcattctgggg
gacctgaatacagctcatcgccccattgaccactgtgatgcagccaatctggagtgcttt
gaagaagatccagggcgcaagtggatggatggcttgctcagtaaccaagagtgccaggct
gggtcccaagtagggccgcccttcattgatagcttccgctatttccaaccaaagcaggaa
aaggccttcacctgctggtcagtgatcagtggagcccgccatctcaattatggcacccga
attgactatgtgctaggagacagaactctggtcattgataccttccagacctccttcctg
cttcctaaggtgatgggctctgaccactgtcctgttggtgctgtcttgaatgtgtcctct
attcctgcaaaacagtgtccgcctctatgcactcgcttcctcccagagtttgcaggcacc
cagctcaagattctccgcttcctagttcctcttgagcaagaacctgtgctagagcaatcg
gtaattcactttagcaatcaaagccaggtgcagaaacgacagaaaaaagcccttgtgcgc
acaaccaggcctcggccagatcaggctggttccagaagaaaccagaaagacttaatgagc
tacttccagccttcctcgagccattcccaaacatcttccaatttgaagctacctcacttg
cctgccgtggctccccctgtgatccaaaagactcctgaggaggaggtgatggccaaaatg
gtagaagaacaggccaaagctaaagatgagaaggagggacagaccttgttctggaagtct
gtgcttggaggaccttctcctgtgcccctctgtggaggccacaaggagccatgtgtgatg
cgtactgtaaagaagtcaggaccaaacctgggccgccacttttacatgtgtgccaggccc
cagggtcctcccagtgacccatcatcccgctgcaacttcttcctctggagaaaacccagc
tga
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