Perognathus longimembris pacificus (Pacific pocket mouse): 125344248
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Entry
125344248 CDS
T08928
Symbol
Tbc1d8b
Name
(RefSeq) TBC1 domain family member 8B
KO
K19951
TBC1 domain family member 8/9
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125344248 (Tbc1d8b)
Membrane trafficking [BR:
plop04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125344248 (Tbc1d8b)
Endosome - Golgi transport
Rab GTPases and associated proteins
125344248 (Tbc1d8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
125344248
NCBI-ProteinID:
XP_048192831
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All DBs
Position
X:complement(34841862..34902799)
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AA seq
1120 aa
AA seq
DB search
MWLKPEEVLLKNAFKLWLTEKSNDYFVLQRRRGYGEEGGGGLTGLLVGTLDSVLDSTAKV
APFRILHQTPDSQVYLSIACGGNKEEITKHWEWLEQNIMTTLSVFDSNEDITNFVQGKIR
GLIAEEGKQSFAKEDDPEKFREALLKFEKSFGLPEQEKLVTYYSCSYWKGRVPCQGWIYL
STNFLSFYSFLLGSEIKLIISWDSISKLEKTSNVLLTESIHVCSQGESYYFSMFLHINET
YLLMEQLANYAIRRLFDKETFENDPVLDDPLQITKRGLENRAHSEQFSALFRLPKEETLK
EIHECFLWIPFTHLNTQGKMCISQNYICFSSQDGNLCSVIIPLREVLAIDKTDESTKSVI
ISIKGKRAFRFNEVKEYEHLVTKLRLKCGTSSTRRNVSTEVAVSSDSATPSDDSEAQSLT
SQKECSKTVSTEALMTVFHPQNLETLNSKVLKEKMKEQLWNILFSECGRGISMFRTRKTR
DLVVRGIPETLRGELWMLFSGACNDMAANPGYYSEVVEQSLGTSNMATEEIERDLRRSLP
EHPAFQSDTGISALRRVLTAYAYRNPQIGYCQAMNILTSVLLLYAKEEEAFWLLVAVCER
MLPDYFNRRIIGALVDQAVFEELIRDHLPQLTEHMTDMTFFSSVSLSWFLTLFISVLPIE
SAVNVVDCFFYDGIKAILQLGLAILDYNLDKLLTCNDDAEAVTVLNRFFDSVINKDSPLP
SSVQQGSNVNEGKSSDATVDITDLIKESNEKYGNLLHEDIHSMRCRNRLYVIQTLEETTK
KNVMRVVSQDVKLSLQELEELYAIFKKELFLSYYWCVGYSELKHHDPSLPYLEQYQIDCQ
QFRVLYHLLSPWACSANRDSLALWTFRLLDENSDCLINFKEFASAIDIMYNGSFTEKLKL
LFKLHVPPAYTEITKDSSKGDDLTTEELLYFSKLHVSRPANKKKSELRKPSTSKGNVDIQ
AYVSKWQDELLKKQESIKDLPRMNQSQFIQFSKTLYNLFHEDTEEESLYQAIAVVTSLLL
RMEELGRKLHSPSSSAQEISAALSAAEGTSVENAERFLERKAASRKEEHQWSFSFEQILA
SLLNEPVLVRFFEKHIDLKAKLEHTKISQLKSRTKVHISC
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaagcctgaggaagtgctcctgaaaaatgcgttcaagctgtggctgaccgaa
aagtctaacgactactttgtgctgcagcggcgtcgaggctacggggaagaaggcggaggg
gggctcacaggtcttctggttgggacacttgattcagtcttagactctactgctaaagta
gctccatttcgcatcctacaccagacaccagattctcaagtttacttgtcaattgcatgt
ggaggtaacaaagaagaaataaccaagcattgggaatggttggagcaaaatatcatgaca
actctgtctgtatttgattcaaatgaagatattaccaattttgtgcaaggcaagataaga
ggattaattgctgaggagggaaaacaaagttttgcaaaagaagatgatcctgagaaattt
cgagaagctcttttaaaatttgaaaaatcttttggtttaccagagcaggagaaattagtg
acctattattcatgcagctattggaaaggacgagttccttgtcagggttggatctatctt
agtaccaactttctaagtttctattcttttttgctgggatcggaaataaaacttattatc
tcctgggattccatctcaaaacttgagaagacttcaaatgtcctcctgacagagagtatt
catgtgtgttcccaaggagagagttactacttttcaatgtttttacacattaatgaaaca
taccttcttatggagcaactggcaaattatgccataaggagacttttcgataaggaaaca
tttgaaaatgacccagtccttgatgatccactacaaattaccaaaagaggcttggaaaat
cgagctcacagtgagcaattcagtgccctttttaggctgcccaaagaagagactttgaaa
gaaatacatgaatgtttcttatggattccatttacccacctcaatactcaagggaaaatg
tgcatttcacaaaactatatctgctttagtagccaggatggcaatctttgtagtgtaatc
attccattacgagaggtattagctatagataagacagatgagtccaccaaatctgtcatc
attagcatcaaaggaaaaagagcatttcgcttcaatgaagttaaagaatatgagcacctg
gtgacaaaactcaggctcaagtgtgggacttcttcaactcgacgtaatgtcagtactgag
gtggctgttagttctgactctgcaaccccttctgatgattctgaagcacaatctttgaca
agtcagaaagaatgcagtaagactgtgagcaccgaagccttaatgacagtatttcaccct
cagaatttggagactcttaattctaaagtgctgaaagaaaagatgaaagaacaattgtgg
aacatattattttctgaatgtggacgtggtattagcatgtttcggaccagaaagactaga
gatctggttgtaagagggattccagaaaccttaaggggagagctctggatgcttttttca
ggtgcttgtaatgacatggctgcaaatcctggctattactctgaagtagttgaacaatct
cttggaacctccaacatggctactgaggaaattgaacgtgatttgcgtcgctccctgcct
gaacacccagcatttcagagtgatactggtatatctgctctgaggcgggtactcactgct
tatgcatataggaatccccaaataggatactgccaggcaatgaacattttgacttcagtg
ttgcttctatatgcaaaagaagaagaagctttttggcttctggttgctgtatgtgaacga
atgttgcctgattactttaatcgtcgaattattggtgccttggtggatcaggcagtgttt
gaagaacttatcagggatcaccttcctcagctgacagagcacatgaccgacatgacattc
ttttcctcagtttctctgtcctggttcctcacgcttttcattagcgtgctgcctattgaa
agtgcagtgaatgttgtggactgtttcttctatgatggaataaaggccattttacaactg
ggattggcaatacttgactataatttagacaaacttctgacgtgtaatgatgatgctgag
gctgtgacagttttaaacaggttcttcgacagtgtcattaacaaggatagcccattgcct
tcaagtgttcagcagggttcaaatgtgaatgagggaaaaagcagtgatgctacagtggat
attacagatttgatcaaagagtctaatgagaaatatggtaaccttctccatgaagatata
catagcatgcgctgtcgaaatcggttgtatgtgatacagactctagaagaaacaaccaag
aagaatgtgatgcgtgttgtatcacaagatgtaaagctgagccttcaggaactggaggaa
ctttatgctatctttaagaaagagctgtttttatcttattactggtgtgtgggttattca
gaattgaaacaccacgaccccagcctgccatatttggaacagtatcagatcgactgccag
cagttcagggtgttgtatcacttgttgagtccctgggcatgttctgcaaacagagactcc
ctagctctatggacattcagattgttggatgaaaattctgactgcctaataaacttcaaa
gaattcgcctctgcaattgatataatgtacaatggaagttttactgagaagcttaagcta
ctttttaagctacatgttcccccagcatatactgaaataactaaggattcctcaaaggga
gatgatcttacaacagaagaattgctttatttcagcaaactccatgtttccaggcctgca
aataagaagaaatcagaattaagaaaacccagcacttcaaaaggaaacgttgatattcaa
gcatatgtaagtaagtggcaagatgagcttctcaaaaaacaagaaagcattaaagattta
ccaagaatgaatcagtcacagtttattcagttttcgaagaccctctacaacttatttcat
gaggacactgaagaagagtcattatatcaagccattgctgttgtaaccagccttttactc
aggatggaagaacttggaaggaaactacatagcccttcgtcatctgcccaagaaatctct
gctgcattaagtgctgctgaaggaaccagtgtggagaatgcagagagatttctggagaga
aaggcagcctctcgcaaggaggaacaccagtggtcattttcatttgaacagattcttgca
tctctgttgaatgaaccagtcttggtgaggttttttgagaaacacatagatttaaaagcc
aagctagaacatacaaaaatctctcagttaaaatctagaaccaaggttcacatctcttgt
tag
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