KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125344255
Entry
125344255         CDS       T08928                                 
Symbol
Col4a5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
  KO
K06237  collagen type IV alpha
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04151  PI3K-Akt signaling pathway
plop04510  Focal adhesion
plop04512  ECM-receptor interaction
plop04820  Cytoskeleton in muscle cells
plop04926  Relaxin signaling pathway
plop04933  AGE-RAGE signaling pathway in diabetic complications
plop04974  Protein digestion and absorption
plop05146  Amoebiasis
plop05165  Human papillomavirus infection
plop05200  Pathways in cancer
plop05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:plop00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    125344255 (Col4a5)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    125344255 (Col4a5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125344255 (Col4a5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    125344255 (Col4a5)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    125344255 (Col4a5)
  09154 Digestive system
   04974 Protein digestion and absorption
    125344255 (Col4a5)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    125344255 (Col4a5)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    125344255 (Col4a5)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    125344255 (Col4a5)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    125344255 (Col4a5)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    125344255 (Col4a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:plop04147]
    125344255 (Col4a5)
   00536 Glycosaminoglycan binding proteins [BR:plop00536]
    125344255 (Col4a5)
Exosome [BR:plop04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   125344255 (Col4a5)
Glycosaminoglycan binding proteins [BR:plop00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   125344255 (Col4a5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 125344255
NCBI-ProteinID: XP_048192844
LinkDB
Position
X:complement(33161129..33347801)
AA seq 1691 aa
MEVRGVHLAAGLVFLALSLWGQPAEAAACYGCSPGSKCGCSGVKGEKGERGFPGLEGHPG
LPGFPGPEGPPGLQGQKGDDGIPGPPGPKGIRGSPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGLKGEPGSIIMSSLPGPKGNLGYPGRPG
LQGPAGPMGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDVEFQKGDQGDPGDRGPPGPPGMCGVPGPPGGVKGDKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPTPGTGLIVGEKGN
PGLPGLPGEKGERGFPGVQGPPGLPGPPGSAVMGPPGPPGFPGERGQKGDDGPPGISIPG
SPGIDGQPGAPGLPGPPGPPGPYIPFRDALCKAGPPGSPGSPGDKGFPGEQGVKGDKGDT
CFNCIGNGIAGPPGHPGLPGLPGPPGSLGFPGQKGEKGHAGATGPKGLPGIPGAPGAPGF
PGSKGDPGDILTLPGMKGQKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGIDFKG
ERGPPGNPGLPGLPGNMGAMGPVGFGPPGPIGEKGIQGVPGNQGQPGIPGPKGEPGRTIT
QPGKPGLPGHPGRDGEVGLPGDPGLPGQPGFPGIPGSKGEPGIPGIGLPGPPGPKGFPGI
PGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFGLPGPPGPPGLPGFKGTLGPKGDRGFP
GPPGPPGRTGLDGLPGPKGDVGPNGQPGPVGPPGLPGIGVQGPPGPPGIPGPIGQPGLHG
IPGEKGDPGPPGFDVPGPPGERGSPGLPGAPGPIGPPGSPGLPGKAGASGFPGIKGEMGM
MGPPGPPGPLGVPGRSGVPGLKGDDGLQGQPGLPGPEGEKGGKGEPGLPGPPGPIDPSRL
GSKGEKGEPGLPGIPGLSGPKGYQGLPGDPGQPGLSGQPGLPGPAGPKGNPGLPGQPGLI
GPPGLKGSLGDMGFPGPQGVDGAPGPPGLPGQPGSPGLPGQKGDKGDPGVSGIGFPGLPG
PKGEPGLPGYPGNPGIKGSVGDTGLPGLPGTPGAKGQPGLPGFPGTPGFPGPKGITGPPG
NPGLPGEPGPVGGGGRPGPPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDGGPPGIPGNPGLPGPKGEPGFQGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPP
GRPGPTGFQGLPGPEGPRGLPGNGGIKGERGNPGPPGQPGLPGLKGDQGPPGLPGNPGRP
GLNGMKGDPGLPGVPGFPGMKGPIGIPGSTGPEGEPGLTGPPGPPGLPGPSGQSIIIKGD
AGPPGVPGPPGLKGPPGLPGPQGLPGATGPPGNPGRNGLPGFHGAGGHKGDPGLPGQPGS
RGLDGPPGPDGLQGPPGPPGSSFVAHGFLITRHSQTTDAPHCPHGTVQVYEGFSLLYVQG
NKRAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPKPMPMNMEPLKG
QSIQPFISRCAVCEAPAVVIAVHSQTIQIPHCPQGWESLWIGYSFMMHTSAGAEGSGQAL
ASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVDVSDMFSKPQSETLKAGELRTR
VSRCQVCMKRT
NT seq 5076 nt   +upstreamnt  +downstreamnt
atggaagtgcgtggagtccacctggctgccggcttggtcttcctggccctgagtctttgg
ggacagccggcagaggctgcggcttgctatgggtgttctccaggatcaaagtgtggctgt
agtggtgtaaaaggggaaaagggagaacgaggatttccaggtttagaaggccatccaggt
ttgcctggatttccaggtccagaagggcctcctggacttcagggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaaggaatcagaggatctcctggactacctggattt
ccagggacaccaggtcttcctggaatgccaggccatgatggagccccaggacctcaaggt
atccctggatgcaatggaaccaagggagaacgtggctttccaggcagtcccggttttcct
ggcttacaaggccctccaggacctcctggtatcccaggtttgaagggagaaccagggagt
atcatcatgtcatcactgccaggaccaaaggggaacctgggatatccaggtcgtcctggg
ttacaaggcccagctggtcccatgggcataccagggccaattggccctccaggaccacca
ggtttgatgggccctcctggcccaccaggattgccaggaccaaaggggaatatgggttta
aacttccagggacccaaaggtgaaaagggtgagcaaggtcttcaggggcctcctgggcca
cctgggcagatcagtgagcagaaaagaccaattgatgtagagtttcaaaaaggagatcag
ggagatcctggtgaccgaggaccacctggacctccaggaatgtgtggtgttcctggccct
cctggtggtgtgaaaggcgacaagggtgagcaaggagagccaggcaaaagaggtaaacca
ggcaaagatggagagaatggtcaaccaggaattccaggtttgcctggtgatcctgggtac
cctggtgaaccaggaagggatggtgaaaagggccaaaagggtgatactggcccacctggg
cctcctggactggtaattcctacacctggcactggtctgattgtgggagaaaaaggaaat
cctggattacctggcttgcctggagaaaaaggagaaagaggatttccaggagtacagggt
ccacccggccttcctggacctccagggtctgcagttatgggtcctcctggtccccctgga
tttcctggagaaagaggccagaaaggtgatgatggtccacctggaatttctattcctgga
tctcctggaattgatggacagcctggtgctccgggccttccgggtcctcctggccctcct
ggtccttacatcccatttcgtgatgcgctatgtaaagctggcccaccaggctccccagga
tctccaggtgataaaggatttccaggagaacaaggagtgaaaggtgataaaggtgacacc
tgcttcaactgtattgggaatggtatagcaggacctccaggacatcctggtttgccaggt
ctcccaggtcctccaggatctcttggttttcctggacagaagggtgaaaaaggacatgca
ggagcaaccggtcccaaaggattgccaggcatccctggagctccaggtgctccaggcttt
cctggatctaaaggtgatcctggtgacatcctcactcttccaggaatgaagggtcaaaag
ggagagctgggatcccctggagctccagggcttcctggtttacctggcactccaggacag
gatggattaccagggcttcctgggcccaaaggagagcctggtggaattgattttaagggt
gaaagaggtccccctggaaatccaggcttgccaggtctcccagggaatatgggtgctatg
ggcccagttggttttggtcctccaggcccaataggtgaaaaaggcatacaaggtgtgcca
ggaaatcaaggccagccaggaattccaggtcctaaaggcgagccaggtcggacaataacc
cagccaggaaagcctggcctgcctggtcatccaggcagagatggtgaagtaggtcttcca
ggcgaccctggacttccaggccaaccaggattcccaggaatacctggtagcaaaggagag
ccaggtatccctggaattgggcttcctggaccacctggtcccaaaggctttccgggaatt
ccaggacctccaggagctcctgggacacctggaagaattggtttagaaggccctcctgga
ccaccaggctttccaggaccaaagggagagccaggatttgggctacctggaccacctggg
ccaccaggactcccaggtttcaaaggaacacttggcccaaaaggtgaccgtggttttcca
ggacctcctggtcctccaggacgaactggtttggatgggctacctggaccaaaaggtgat
gttggaccaaatggacaacctgggccagtagggcctcctggactgccaggaattggtgtc
cagggaccaccaggaccaccaggaattcctggaccaataggccagcctggcttacatgga
atacctggagagaagggagatccagggcctcctgggtttgatgttccaggtcctcctggt
gagagaggcagtccagggctccctggagctcctggccctataggacccccaggatcacca
ggcctcccaggaaaagcaggtgcctctggatttccaggtattaaaggagaaatgggtatg
atgggacctccaggcccaccaggacctttgggagttcctggcaggagtggtgttcctggc
cttaaaggtgatgatggcttacagggtcagccaggacttcctggccctgaaggagaaaag
ggaggtaagggagaacctggccttccaggcccccctggaccaatagatccaagccgcttg
ggctccaaaggagagaagggggaacctggcttacccggtattcctggactttctggacca
aaaggctaccagggtttgcccggagacccagggcaaccaggactgagtggacaacctgga
ttaccagggcctgcaggtcccaagggtaaccctggtctccctggccaaccaggactcata
ggacctcctggacttaaaggaagtctaggtgatatgggttttccaggccctcagggtgtg
gatggggcccctgggcctccaggccttcctggacagcctggctctccaggattacctgga
cagaaaggggataaaggtgatcctggtgtttctggcattggatttccaggtcttcctggc
ccaaagggtgaacctggtctgcctggataccctgggaacccgggtattaaaggttctgtg
ggagatactggtttgcctggattaccagggacacctggagcaaaagggcagccaggcctg
cctggattcccaggaaccccaggctttcctggacccaagggtattactggtcctcctgga
aaccccggccttccaggagaaccaggtcctgtaggtggtggaggccgtcctggaccacca
ggacctccaggtgaaaaggggaaaccaggtcaagatgggattcctggaccagccggacag
aagggcgaaccaggtcaaccaggctttggaatcccaggaccccctggacttccaggactt
tctggtcaaaagggtgatggcggaccacctggcattccaggaaatcctggccttccaggt
ccaaaaggtgaaccaggctttcagggtttccctggtgtgcagggtccccccggcccacct
ggttctcctggtccagctctggaaggtcctaaaggcaaccctgggccccaaggtcctcca
ggaagaccaggtcctacaggttttcaaggtctaccaggtccagaaggtccccggggtctc
cctggaaatggaggtattaaaggagagaggggaaacccaggcccacctgggcaacctggc
ttgcctggcttgaaaggagatcaaggaccaccaggactcccgggcaatcctggccgacca
ggtctcaatggaatgaaaggagatcctggtctccctggggtcccaggatttccaggcatg
aaaggacctattggaatacctggttcaactggtcctgagggtgaaccaggacttactggc
ccgccaggtcctcctgggttacctggtccttcaggacagagtattataatcaaaggagat
gctggtcctccaggagttcctggcccgcctgggttaaaaggtccaccaggactaccaggc
cctcaaggtttaccaggtgctactggccctccaggaaatcctggacgtaatggactccct
ggttttcatggtgctggagggcacaaaggagacccaggtcttccaggacagccaggttcc
cgtggcttggatggtcccccagggccagatggactgcaaggtcccccagggccccctgga
agttctttcgttgcccatggattcctcatcacacgtcatagccagacaacagatgcacca
cactgcccacatggaacagtccaagtctatgaaggcttttctctcctgtatgtgcaaggc
aacaaaagagcccacggccaagatttggggactgctggcagctgccttcgtcgcttcagt
actatgcctttcatgttctgcaacatcaacaatgtttgcaactttgcttcaagaaatgac
tattcttactggctctccactccaaagcctatgcctatgaatatggaacctctgaagggc
cagagcatccagccatttattagtcgatgtgcagtatgtgaagctccagctgtggtgatt
gcagttcacagccagaccatccagattccccattgtcctcagggatgggaatctctttgg
atcggttattcctttatgatgcatacaagtgcaggggcagaaggctcaggacaagccttg
gcctctcctggttcctgtttggaagagttccgttcagctcctttcattgaatgtcatggg
cgaggaacttgtaattactatgccaattcctatagcttttggctggcaactgtagatgtg
tcagatatgttcagtaaacctcagtcagaaacactgaaagcaggagaattgaggacacgt
gttagccgatgtcaagtgtgcatgaagaggacatag

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