Perognathus longimembris pacificus (Pacific pocket mouse): 125344262
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Entry
125344262 CDS
T08928
Symbol
Hcfc1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03083
Polycomb repressive complex
plop04980
Cobalamin transport and metabolism
plop05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125344262 (Hcfc1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
125344262 (Hcfc1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125344262 (Hcfc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plop01009
]
125344262 (Hcfc1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125344262 (Hcfc1)
03029 Mitochondrial biogenesis [BR:
plop03029
]
125344262 (Hcfc1)
Protein phosphatases and associated proteins [BR:
plop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125344262 (Hcfc1)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
125344262 (Hcfc1)
HMT complexes
COMPASS/SET1 complex
125344262 (Hcfc1)
MLL-HCF complex
125344262 (Hcfc1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
125344262 (Hcfc1)
Mitochondrial biogenesis [BR:
plop03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
125344262 (Hcfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
125344262
NCBI-ProteinID:
XP_048192867
LinkDB
All DBs
Position
X:1134169..1159666
Genome browser
AA seq
2073 aa
AA seq
DB search
MASAVSPANSPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH
VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW
KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRP
GSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIETL
TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN
LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLE
TEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSV
PANPPKSPAPAAAAPAVQPLTQVGITLLPQAAAAAPPTTTTIQVLPTVPGSSIAVPTAAR
TQGVPAVLKVTGPQATAGAPLVTMRPASQAGKAPVTVTSLPAGVRMVVPTQSAQGTVIGS
NPQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTLPATVKVASSP
VMVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTK
TITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAG
TILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIIT
QAGATGVTSTPGIKSPITIITTKVMTSGTGTPAKIITAVPKIATGHGQQGVTQVVLKGAP
GQPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGA
HSTSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPTITMQPVSQPTQ
VTLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGDVQPGTVTLVCSNPPCE
THETGTTNTATTTVVANLGGHPQPTQVQFVCDRQEAASLVTSAVAQQNGSVVRVCSNPPC
ETHETGTTNTATTATSNIAGQHGCSNPPCETHETGTTSTATAAMSNMGARQQRDARRASG
TPTLVRIAVAPGVSEGAPGAVKPQCQTRQIGTTSTTMTVMATGGPRSAGPMLRPSAALEA
GAHSPVFVQPALPGSSKDVALSCQLETHATYTTSTPTVALPMMGAGEPGAVLGLPTTLYE
SLHPGATSTTMTVTALEALLCPSATVTQVCSNPPCETHETGTTNTATTSNAGSAQRVCSN
PPCETHETGTTHTATTATANGGAGQPDGGQQPPAGHPCETHQTTSTGTTMSVSVGALLPD
AAPSHRTLESAATSQAGASLLTPFPTQRVCSNPPCETHETGTTHTATTVTSNMSSNQDPP
PAASDQGEAESTQGDSINITSSSAVTTTVSSTLPRAVTTVTQSTPVPGPSVPKISSLTET
TLGALTSEVPIPATITMTIANTATSDMPFSAVDILQPPEELQVSPGPRQQLPPRQLLQST
ATPLMAESTEVLSASQTPELQAAVDLSSTGDPSSAQEPATSAVVATVVVQPPPPTQSEVD
QLSLPQELMAEAQAGTTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQ
QAVMAGTGEPMDTSEAAAAVTQAELGHLSAEGQEGQATTIPIVLTQQELAALVQQQQQLQ
EAQAQQQHHLPTEALAPADSLNDPAIDSNCLNDLAGAVPNTVALLPSTATESLAPSNTFV
APQPVVVASPAKLQAAATLTEVANGIETLGVKPDLPPPPSKAPVKKENQWFDVGVIKGTN
VMVTHYFLPSEDAVPLDDDSSTVPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISA
FKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQAGGESKSSA
PAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQE
TSKDSSGSKPASKRPMSSPEMKSAPKKSKADGQ
NT seq
6222 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggccgtgtcgcccgccaactcgccagcggtgctattacagccccgctggaag
cgagtggtgggctggtcgggtcctgtgccccgaccccgccatggccatcgagccgtggcc
atcaaggagctcatcgtggtatttggtggcggcaatgaagggatagtggacgaactgcac
gtgtacaacacggcaaccaaccagtggttcatcccggctgtgcgaggggatatccctcca
gggtgcgcagcctatggcttcgtgtgtgacggtactcgcctactagtgtttggtgggatg
gtggaatatgggaaatacagcaacgacctctacgagctgcaggcgagccggtgggagtgg
aagagactcaaagcaaagacacccaaaaatggaccccctccatgccctcggcttgggcac
agcttctcccttgtgggcaacaaatgctacctatttgggggtctggccaatgatagtgag
gaccccaagaacaacattccaaggtacctgaatgacttatatatcctggaattacgacca
ggctccggcgtggtagcctgggacatccccatcacttacggggtcctacccccaccacgg
gagtctcatactgcggtggtctacactgagaaagacaacaagaaatccaagctggtgatc
tacggagggatgagtggttgcaggctaggggacctctggaccctggacattgagacactg
acgtggaacaagcctagcctcagtggggtggcaccccttcctcgtagtcttcactctgca
actactataggaaacaaaatgtatgtgtttggtggctgggtgcctctcgtcatggatgat
gtcaaagtggccacacatgagaaggagtggaagtgcaccaacacgctggcttgtctcaac
ctggataccatggcctgggaaactatcctgatggatactctggaggacaacattcctcgg
gctcgagctggccactgtgcagttgccatcaacacccgcctgtacatttggagtgggcgc
gacggctaccgcaaggcgtggaataaccaagtgtgctgtaaggacctctggtacctggag
acagaaaagccaccgcccccagcccgagtacaactggtacgagctaataccaactccctg
gaggtgagctggggggcagtggcaacagccgacagttaccttcttcagctccagaaatat
gacattcctgccacggctgctaccgccacctcccccacacccaatccagtcccatctgtg
cctgccaaccctcccaagagccctgccccagcagcagctgcacctgctgtacagccactg
acccaagtaggcatcacgctcctgccccaggccgccgccgccgcgcccccgaccaccacc
accatccaggttttgcccaccgtgccaggcagctccattgcggtgcccaccgcagccagg
actcaaggtgtccctgctgttctcaaagtaactgggcctcaggccactgcaggagccccg
ctggtcactatgcggcccgccagtcaagctggaaaagcccctgtcactgtgacctccctg
cctgctggtgtacgaatggttgtgcccacacagagtgcccaggggacggtgattggcagc
aacccacagatgagtggaatggctgccctagcagctgctgccgccgccacccagaagatc
cccccttcctcggcacccacagtgctgagtgtcccagcagggaccaccattgtcaagact
gtggctgtcacacctggcacgaccactctcccggccactgtgaaggtggcctcctccccg
gtcatggtgagcaacccagctactcgcatgctgaagaccgcagcggcccaagtgggcacg
tctgtgtcctccgcagccaacacatccacccgccccatcatcacagtacacaagtccgga
actgtgacggtggctcagcaggcccaggtggtgaccacagtcgtaggtggtgtcaccaag
accatcaccctggtgaagagccccatctctgtcccaggaggcagtgctctgatttccaat
ctggggaaagtgatgtcagtggtccagaccaaaccagttcagacttcagccgttacaggc
caggcgtctacaggccctgtgactcagatcatccagaccaaagggcccctgccagcaggg
acaatcctgaagctggtgacctcagctgatggcaagcccaccaccattattaccaccacg
caagccagtggggctgggaccaagcccaccatcttgggcattagcagtgtctcccccagc
actaccaaacctggaacaaccaccatcatcaagaccatccccatgtcggccatcatcacc
caagcgggtgccacaggtgtgaccagtactcctggcatcaagtcccccatcaccatcatc
accaccaaagttatgacttcgggaactggaacgcctgccaaaatcatcactgctgtcccc
aagatcgccacaggccatgggcagcaaggagtgacccaggtggtgctaaagggggcccct
ggacagccaggcaccatcctccgcaccgtgcccatgggcggcgttcgcctggtcacccct
gtcaccgtctccgccgtcaagccagccgtcaccacattggttgtgaagggcaccacaggt
gtcacaaccctaggcacagtgacaggtacggtctccaccagccttgctggagctggggct
cacagcaccagtgcctccctggctacacccattaccaccctgggcaccattgctaccctc
tcgagtcaggtgatcaaccctactgccatcactgtgtctgcagcccagaccaccttgaca
gcggccggcggcctcaccacccccaccatcaccatgcagcctgtctctcagcctacccag
gtgactttgatcacagctcctagtggagttgaggcccagcctgtgcatgaccttcctgtg
tctattctggcctcacctacgacagagcagcccacggccacggtgaccatcgctgactcg
gggcagggggatgtgcagcctggcacggtgaccctcgtgtgctccaacccaccctgcgag
acacacgagacaggcaccaccaacacagccaccaccacagtggtggccaaccttgggggc
cacccccagcctacccaagtgcagtttgtttgtgacagacaggaagcagcttctcttgtg
acctctgccgtggcgcagcagaatggcagtgtggtccgtgtctgttccaacccgccctgc
gagacccacgagacgggcaccaccaacactgccaccacggccacgtccaacatagctggg
cagcatggctgctccaacccgccctgtgagacccacgagacgggcaccaccagcactgcc
accgcagccatgtccaacatgggtgcccggcagcagcgagatgcacggcgcgcctcaggc
acccccactctggtccgcatcgctgtggctcccggggtgtcggagggagcccccggcgct
gtcaagcctcagtgccaaacccgccagataggcaccacaagcaccactatgactgtgatg
gccaccgggggcccacgctcagctggcccaatgctcaggccaagtgcggccctggaggcc
ggggcccacagccccgtgtttgtgcagccagcccttccaggcagcagcaaggacgtggcc
ctgagctgccagctggagacccacgccacctacacaaccagcaccccgaccgtggccctc
cccatgatgggtgctggggagccgggcgcagtgctgggcctccccaccactctgtatgag
agcctgcacccgggggcaaccagcaccaccatgactgtgacggccctggaggcgctgctg
tgcccctcggccaccgtgacccaagtgtgctccaacccgccctgtgagacccacgagacg
ggcaccaccaacaccgccactacctccaacgcgggcagtgcccagcgggtgtgctccaac
ccgccttgcgagactcatgagacgggcaccacacacacggccaccactgccaccgccaac
gggggcgcaggccagcccgacggcgggcagcagcccccagcaggccacccctgcgagaca
caccagaccacttccactggcaccaccatgtcagtcagtgtgggcgctctgcttcccgac
gccgccccctctcacaggaccctagagtctgccgccacctcccaggccggtgcttcattg
ctgactcccttcccgacacagagggtgtgctccaaccctccgtgtgagacccacgagacg
ggcaccacgcacacagccaccactgtcacctccaacatgagctcaaaccaagacccccca
ccagctgccagtgaccagggggaagcggagagcacccagggcgacagcataaacatcacc
agctccagtgccgtcaccacgactgtgtcctccaccctaccccgagcggtgaccactgtg
acacagtccacacccgtaccaggcccctctgtgccgaagatctcatcactgactgagact
accctgggggctctgacttccgaagtccccattccagccaccataacaatgaccatagcc
aacacagcaacttctgacatgcccttctctgctgttgacatcctgcagcccccagaggaa
ctccaggtctcaccagggcctcgccagcagctgccgccccggcaactcctgcagtctacc
gccacccccctgatggcggagtccaccgaggtcctgtcagcctcccagacccctgagctc
caggccgccgtggatctgagcagcacaggggatccatcttcggcccaggagcctgccacc
tcagcagtagtggccactgtggtggttcagccacccccacccacgcagtctgaagtagac
cagttgtcccttccccaggagctgatggctgaggcccaggcaggcaccaccacgctcatg
gtgacggggctcacccctgaggagctggcagtgactgcagcagctgaagcagctgcccag
gcggcagccacagaggaagcccaggccctggccatccaggcagtgctccaggctgcccag
caggccgtcatggcaggcacgggggagcccatggatacttcggaggcggcggcggccgtg
acccaggccgagctgggacacctttcagccgagggccaggagggccaggccacgaccatc
cctatcgtgctgacccagcaggagctggccgccctggtgcagcagcagcagcagctgcag
gaggcccaggcccagcagcagcatcacctccccaccgaggccctggcccctgccgacagc
ctcaacgacccggctattgacagcaactgtctgaacgacctggctggggctgtccccaac
acggtggccttgctgccctctacggccactgaaagcttggctccatccaacacattcgtg
gccccccaacctgttgtggtggccagcccagccaagctgcaggctgcggccaccctgact
gaagtggccaatggcatcgagactctgggtgtgaaaccagacttgccgcccccacccagc
aaagcccctgtgaaaaaggagaatcaatggtttgacgtaggggtcattaagggcaccaat
gtcatggtgacccactattttctgccatcggaagatgccgtcccgttggatgatgactcg
agcactgtccctgactataaccagctaaagaagcaggagctgcagccaggcacggcctac
aagtttcgcgttgccggtatcaatgcctgcggccgggggcccttcagtgagatatcggca
tttaagacgtgtctgcctggcttcccaggagccccttgtgccattaaaattagcaaaagt
cccgatggtgcccaccttacctgggagccgccatcagtgacatctggcaagatcatcgag
tactccgtgtacctggccatccagagctcccaggccggaggcgagtccaagagctcggcc
ccggcgcagctggccttcatgcgggtgtactgtgggcccagcccctcctgcctagtgcag
tcatccagcctgtccaacgcccacatcgactataccaccaaacccgccatcatcttccgc
attgccgctcggaacgagaagggctatggcccagccacacaagtgaggtggttgcaagaa
accagtaaagacagctcgggcagcaagccagccagcaagcggcccatgtcctctccggag
atgaaatccgctccaaagaagtctaaggcagatggtcagtga
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integrated database retrieval system
