Perognathus longimembris pacificus (Pacific pocket mouse): 125344595
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Entry
125344595 CDS
T08928
Name
(RefSeq) LOW QUALITY PROTEIN: interferon-induced protein with tetratricopeptide repeats 5-like
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plop03016
]
125344595
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
125344595
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_1
RMD1-3
TPR_2
TPR_Psidin_N
DUF8191
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
125344595
NCBI-ProteinID:
XP_048193018
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MATGNEEGQLEKRNFDTCHPELFLQFPLWHHKLAASSRYYRSEMKDSLCSDIPYLYPYLI
AWKVLGAEDEGIVRVESDSLGQPGCQGRMLAWEGMGCGKGGMGTWSTSSIGDPGKGETWT
LEEAHRWAARVWCLATCGLGRIMTHEEVRKWKLVELAILASVQATSFGFSTTSLGFCVLQ
ARFPADRSINCLSLGETAWLGSPSGKGVAAMVSELFQSPHTLFALSTMPKNKDFLKPILL
ELECHFTWNLLKEDIDLFDVEDTIGQQLEFLTTKPRLALYNLLAYVKHLKGQNQDVLVCL
EQAEETIQREYSEEDVLSVVTWDNYALVFYLMQRLEDVQKYIDKVGGICKKLXHKVDRPE
IDCEKGWALLNFGGKYYQKVKAALEVDPDNPEYNIGYAIIVYRLDDSDREGFVKSFSLGP
LRKVVTLNPDNSYIKVFLALKLQEVHAESEGESYIEEILDQISSHSYVLSYAAKFYRRKI
AWDKALEFFKEVLEVMPTSSFLHHQMGLCYQAQMIQIKNATCNRPKGRDKLKVDELIASA
VFHFKAAMDRYSMFAFAYMDLAKMYAEGGPYSNAEDVFQKALTLENITDDHKYQIHYHYG
RFQEFHHKSESTAIYHYLEALKVKEGRSSLRIKLIGALKKLAMKRLCPIALDVQNSGDLG
FVYRLEGEKRQSAKYYERAQKINAEFLTALCLDEYFRHYIGWSTRLS
NT seq
2122 nt
NT seq
+upstream
nt +downstream
nt
atggccacaggaaatgaagaaggtcaattagagaagcgaaattttgatacttgtcatcca
gaactctttctacagtttcccttgtggcaccacaagctggctgcatccagcagatactac
agaagtgaaatgaaggactctctatgcagtgatattccatatctgtatccatatttaata
gcatggaaggtcttgggtgcagaggatgagggcatcgtccgtgtggagagcgattccctg
gggcagcctgggtgccaagggaggatgctggcctgggaaggcatgggatgtggcaaggga
gggatgggcacatggtccacctccagcataggggatcctggcaagggggagacgtggact
ctggaggaggcacaccgctgggcggcaagagtgtggtgcctggctacatgtggtctgggc
aggatcatgacccacgaggaggtgaggaagtggaaactagttgagctggcaatattggct
tctgtgcaagcaacctcctttggcttcagtacaacctcccttggcttctgtgtcttacaa
gcgcgcttcccagcagacagaagcattaactgccttagtcttggggagacagcctggcta
ggcagtccaagtgggaaaggagttgcagccatggtctcagagcttttccagtctccccac
accttgtttgctcttagcaccatgccgaagaataaagacttcttgaagccaattctgtta
gagctagaatgccactttacctggaatttacttaaggaagatattgacctatttgatgtg
gaagataccattgggcaacagcttgagtttctcaccacaaaacccagacttgctctttat
aatttgctagcctatgtgaaacatctgaagggtcaaaatcaagatgtcctagtgtgcttg
gaacaagcagaagaaaccatccagagagaatactctgaggaagatgtgctaagtgtggtc
acatgggacaactacgccttggtgttttacctcatgcagcggcttgaggatgtgcagaag
tacatagacaaggtagggggcatctgcaaaaaactcntgcacaaggtggaccgtcctgag
attgactgtgagaaaggatgggcactcttgaactttggaggaaagtattaccaaaaggtt
aaggcagctttggaggtagatcctgacaatcctgaatataacataggctatgccatcata
gtgtatcggctggatgattctgacagagaaggatttgtcaagagcttttcactggggcct
ctaagaaaggttgtgactctgaacccagataacagctatattaaggtttttctggccctg
aagcttcaagaagtccacgcagaatcagaaggggaaagttatattgaggagattctagac
cagatatcatcccattcttatgtccttagttatgctgctaaattctacaggaggaaaatt
gcctgggacaaagcccttgagttttttaaagaggtcttggaggtgatgccaacctcttct
ttcctgcatcaccagatgggactttgctaccaggcacaaatgatccagatcaagaacgca
acttgcaacagacctaaaggaagggacaaactgaaggtggatgagctgattgcatctgct
gtcttccatttcaaagcagccatggatcgatattcaatgtttgcgtttgcctacatggac
ctggccaaaatgtacgcagagggaggcccttacagcaatgctgaagatgttttccagaaa
gccctcactctggagaacataaccgatgaccacaaatatcagatccactaccactatggc
cgctttcaggaatttcaccataaatcagaaagtactgccatctatcattatttggaagcc
ttaaaggtcaaagagggtaggtcatccttgcgtataaaactgataggtgctctgaagaaa
ctggctatgaagagactttgtcccatcgctttggatgtgcagaactcaggggacctaggt
tttgtttacaggcttgagggggagaaaaggcagtcagccaagtactatgagagagcacaa
aagataaatgcagaatttctcactgctctctgtttggatgaatacttcagacattatatt
ggttggtctacgagactctcag
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