Perognathus longimembris pacificus (Pacific pocket mouse): 125344998
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Entry
125344998 CDS
T08928
Name
(RefSeq) thrombospondin-2
KO
K04659
thrombospondin 2/3/4/5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04145
Phagosome
plop04151
PI3K-Akt signaling pathway
plop04510
Focal adhesion
plop04512
ECM-receptor interaction
plop04820
Cytoskeleton in muscle cells
plop05144
Malaria
plop05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125344998
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125344998
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125344998
09144 Cellular community - eukaryotes
04510 Focal adhesion
125344998
09142 Cell motility
04820 Cytoskeleton in muscle cells
125344998
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
125344998
09174 Infectious disease: parasitic
05144 Malaria
125344998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125344998
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plop04147
]
125344998
00536 Glycosaminoglycan binding proteins [BR:
plop00536
]
125344998
Membrane trafficking [BR:
plop04131
]
Endocytosis
Phagocytosis
Opsonins
125344998
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125344998
Exosomal proteins of colorectal cancer cells
125344998
Exosomal proteins of bladder cancer cells
125344998
Glycosaminoglycan binding proteins [BR:
plop00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125344998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
EGF
TSP1_CFP_C
Laminin_G_3
TSP1_ADAMTS
cEGF
Motif
Other DBs
NCBI-GeneID:
125344998
NCBI-ProteinID:
XP_048193212
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MLWRLVLLALCVWPRAQAADPDAEATFDLFSLSNINRKTIGAKQFRGPEPGAPAYRFVRF
DYIPPVSADGLGRILEAMRRKDGFFLAAQLKQDPRSRGTLLALEGPGAAGRRFALVSDGP
RDALDLAFRAGGAQHVLSLEDVGLADARWKNVTVQVAGDAFSLYVGCDLVDSVALDEPFY
EQLPADGSRMYVARGASRESHFRGLLQNVHLVFENSVEEVLSRKGCHRGLGAEANAISEH
TETLHLSPHLTTDFVGHGVQKRPEVCTHSCEELSNMMNELSGLHLMVNQLSKNLERVSDD
NQFLLELIGGPLKTRNMSGCLQDGRFFAENETWVIDSCTSCTCKKFKTICHQISCPPANC
ATPSFIEGECCPSCSHSGAGEEGWSPWAEWTQCSVTCGSGTQQRGRSCDVTSNTCRGASI
QTRACALDKCDTRIRQNGGWSHWSPWSSCSATCGEGNVTRIRLCNSPVPQMGGRSCKGSG
RETKPCQGTPCPVDGRWSPWSPWSACTVTCAGGIRERARVCNSPEPQHGGRDCVGDMKEH
QMCNKRSCPIDGCLSNPCFPGAECNSFPDGSWSCGSCPAGFLGNGTHCEDLDECAVVTDI
CFSTSKASRCVNTLPGFHCLPCPPRYKGSQPFGVGLEAARTEKQVCEPENPCKDKTHNCH
KHAECIYLGHFSDPMFKCECQTGYAGDGLICGEDSDLDGWPNNNLVCATNATYHCIKDNC
PRLPNSGQEDFDKDGIGDACDEDDDNDGVSDEKDNCQLLFNPRQFDYDKDEVGDRCDNCP
YVHNPAQIDTDNNGEGDACSVDIDGDDVFNERDNCPYVYNTDQRDTDGDGVGDHCDNCPL
MHNPDQTDADNDLVGDQCDNNEDIDDDGHQNNQDNCPYISNANQADHDDDGQGDACDSDD
DNDGVPDDRDNCRLVFNPGQEDADGDGRGDICKEDFDNDSVPDIDDVCPENNAISETDFR
NFQMVPLDPKGTTQIDPNWVIRHQGKELVQTANSDPGIAVGFDEFGSVDFSGTFYVNTDR
DDDYAGFVFGYQSSSRFYVVMWKQVTQTYWEDQPSRAYGYSGVSLKVVNSTTGAGEHLRN
ALWHTGNTEGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGYMRVLVHEGKQVMADSGPI
YDHTYAGGRLGLFVFSQEMVYFSDLKYECRDV
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgctctggaggctggtcctgctggccctgtgtgtgtggccgcgtgctcaagccgccgac
ccggacgcggaggcgaccttcgacctcttcagcctcagcaacatcaaccggaagaccatc
ggcgccaagcagttccgggggcccgagcccggcgcgcccgcctaccgcttcgtccgcttc
gactacatccccccggtgagcgcggacgggctgggccggatcctggaggccatgcggcgg
aaggacggcttcttcctggcggcgcagctgaagcaggacccgcggtcccgcggcacgctg
ctggccctggagggccccggcgcggcggggcggcgcttcgcgctcgtgtcggacgggccg
cgcgacgcgctggacctggccttccgcgcgggcggcgcgcagcacgtgctctcgctggag
gacgtgggcctggccgacgcgcgctggaagaacgtcaccgtgcaggtggccggcgacgcc
ttcagcctgtacgtgggctgcgacctggtggacagcgtcgccctggacgagcccttctac
gagcagctgcccgccgacggcagccgcatgtacgtggcccgcggcgcctcgcgggagagc
cacttcaggggtttgctgcagaatgtccacttagtgtttgaaaactccgtggaagaggtt
ctaagcaggaaaggctgccaccgaggcctgggagctgaagccaatgctatcagtgagcac
acggagacactgcacctgagccctcacctcaccacggactttgtcggccatggtgtgcag
aagaggcctgaggtgtgcacacactcctgtgaggagctgagcaacatgatgaacgagctt
tctgggctgcatctgatggtgaaccagctcagcaagaacctggagagagtgtcggatgac
aaccagtttctcctggagcttatcggtggtcccctgaagaccaggaacatgtcaggctgc
ttacaggatggtcggttctttgcagaaaatgaaacctgggtgatagacagctgtacgtca
tgcacctgcaagaaatttaaaaccatctgccaccaaatctcatgcccaccagcaaactgc
gccaccccatccttcattgaaggcgaatgctgcccttcctgttctcactcgggcgcgggc
gaggagggctggtctccgtgggccgagtggacgcagtgctccgtcacctgcggctccggc
acgcagcagcggggccggtcctgcgatgtcaccagcaacacctgccggggcgcctccatc
cagacgcgggcctgcgccctggacaagtgtgacacccgcatccgtcagaacggcggctgg
agccactggtcgccgtggtcctcgtgctcagcgacctgcggcgagggcaacgtcactcgc
atccgcctctgcaattcacccgtgccccagatgggcggcaggagctgcaagggcagtggc
cgggagaccaagccctgccagggcacgccgtgccccgtcgacggccgctggagcccctgg
tctccatggtcagcctgcacggtcacctgtgcgggaggaatccgggagcgggccagggtc
tgcaacagccctgagccccagcacggcgggagggactgcgtgggagacatgaaggagcac
cagatgtgcaacaagaggagctgccccatagatggctgcttgtccaacccctgctttcct
ggagcagagtgcaacagctttcctgatggctcgtggtcctgcggctcctgccctgcgggc
ttcctaggcaatggcactcactgcgaggacctggatgagtgtgctgtggtcacggatatt
tgcttctctaccagcaaagcttcccgctgcgtcaacaccctgcccggcttccactgtctg
ccctgccccccacgctacaaggggagccagcccttcggggttggcctggaggctgccagg
acagaaaagcaggtgtgtgaacctgaaaacccatgcaaggacaagactcacaactgccac
aagcatgcagagtgcatctacctgggtcacttcagcgatcctatgttcaagtgtgagtgc
cagacaggctacgcaggcgatgggctcatctgcggggaggactcggacctggatggctgg
cccaacaacaacctggtgtgtgccaccaacgctacctaccactgcatcaaggataactgt
ccccggctgcccaactccgggcaggaggatttcgacaaggatggaattggtgatgcctgt
gatgaggacgatgacaacgacggcgtgagcgacgagaaggacaactgccagctcctcttc
aacccccgccagtttgactatgacaaggatgaggttggggaccgctgtgacaactgtccc
tacgtgcacaaccccgcgcagatcgacaccgacaacaacggtgaaggcgacgcctgctcg
gtggacatagacggggacgatgttttcaatgaaagagacaactgtccttatgtctataat
acggaccagagggacaccgacggcgatggcgttggggaccactgtgacaactgcccgctg
atgcacaacccagaccagacagacgcggacaatgacctcgtcggggaccagtgcgacaac
aatgaggacatagacgatgacggtcaccagaacaaccaggacaactgcccctacatctcc
aacgccaaccaggccgaccacgacgacgacggccagggcgacgcctgcgactccgacgac
gacaacgacggcgtccccgacgacagggacaactgccggctggtgttcaacccgggccag
gaggacgccgacggtgacgggcggggtgatatctgcaaggaggattttgacaatgacagc
gtccctgacatcgatgacgtgtgcccggagaacaacgccatcagtgagacagacttcagg
aacttccagatggtccccctggacccgaagggaaccacacagatcgatcccaactgggtc
attcgccaccagggaaaggagctggtccagacggcgaactcagacccgggcattgctgta
ggttttgatgagtttgggtctgtggacttcagcggcacattctacgtcaacactgaccgg
gacgacgactacgctggcttcgtctttggctatcagtccagcagccgcttctatgtggta
atgtggaagcaggtcacgcagacctactgggaagaccagcccagcagggcctacggctac
tcgggggtgtccctcaaggtggtgaactccacgaccggcgcgggagagcacctgcgcaat
gccctgtggcacacggggaacacggaggggcaggtgcgcacactgtggcatgaccccaaa
aacatcggctggaaagactacactgcctacaggtggcatctgatccacaggcccaagact
ggctacatgagggtcctggtgcacgagggaaagcaggtcatggcggactcaggaccaatc
tatgaccacacctatgccggtggacgtttgggtctctttgtcttctctcaagaaatggtg
tacttctctgacctcaagtatgaatgcagagatgtctag
DBGET
integrated database retrieval system
