Perognathus longimembris pacificus (Pacific pocket mouse): 125345103
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Entry
125345103 CDS
T08928
Name
(RefSeq) LOW QUALITY PROTEIN: rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125345103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125345103
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
125345103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
PCMT
Motif
Other DBs
NCBI-GeneID:
125345103
NCBI-ProteinID:
XP_048193301
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MLVLRVPIQDGCAVIPAPGGRARGGRTSLGFPARAASSATRRGRCPWCCPARLAAETRGR
DGAAASRGSCLPAGLQRTHHRGSRPPPGLTPTTGAPAHPAGAQRDTVTALSNGGCDDCPH
PRGRGRGGCGGGGGGWGRPRGGGGARGRGAGRGAGRGRGRRRRAVAAVSVEPHRHEGVFV
YRGAEDALATRNLVPGLSVYGERRVTVGEGGARLEYRTWNPFRSKLAAAILGGVEQLHIR
PRSRVLYLGAASGATVSHVSDIVGPDGLVYAVEFSPRAGRDLLNVAKKRTNIVPVLEDAR
HPLRYRMLVGMVDVLVADVAQPDQARIAALNAHAFLRVGGHFLVSVRAPRAGAGAAQAAL
AAELRRLQQENLRPQEQLTLEPYEREHAVVVGVYRPPPRDK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtcctgcgagtccccatccaggacggctgcgctgtgatccccgcgcccgggggt
cgggcccgaggcggccgcacgtcgctgggcttcccggcgcgtgcggcctcctccgccact
cgccgcgggcgctgtccttggtgctgcccggcgcggctggccgccgagacccgcgggcgg
gacggggcggccgctagccggggctcctgcctacccgcggggctccagcgcacccaccac
cggggctcccgcccaccaccggggctcacgcccaccaccggggctcccgcccaccccgcg
ggggcccagcgcgacactgtaacagccctcagcaatggggggtgcgatgactgcccgcac
ccacgcggccggggacgcggcggctgcggcggcggcggcggcggctgggggcggccccgg
ggcggcggcggggcccgggggcgcggcgcgggccggggcgcggggcgcggccggggccgg
cggcgccgggcggtggcggccgtgtcggtggagccgcaccggcacgagggcgtgttcgtg
taccgcggggcggaggacgcgctggccacgcgcaacctggtgcccgggctgtcggtgtac
ggcgagcggcgcgtcacggtgggcgagggcggcgcgcggctcgagtaccgcacctggaac
ccgttccgctccaagctggcggccgccatcctgggcggcgtggagcagctccacatccgg
ccgcgctcccgcgtgctgtacctgggcgccgcctcgggcgccacggtgtcgcacgtgtcg
gacatcgtcgggcccgacggcctggtctacgccgtggagttctcgccccgcgccggccgc
gacctgctcaacgtggccaagaagcgcaccaacatcgtgccggtgctggaggacgcgcgc
cacccgctgcgctaccgcatgctggtgggcatggtggacgtgctggtggccgacgtggcg
cagcccgaccaggcgcgcatcgccgcgctcaacgcgcacgccttcctgcgcgtcggcggc
cacttcctcgtgtcggtgcgggcgccgcgcgcgggcgcgggcgcggcccaggccgccctg
gccgccgagctgcgccggctgcagcaggagaacctgcggccgcaggagcagctgacgctg
gagccctacgagcgcgagcacgccgtggtggtgggcgtctaccggcccccgcccagggac
aagtag
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