Perognathus longimembris pacificus (Pacific pocket mouse): 125345123
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Entry
125345123 CDS
T08928
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125345123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plop03041
]
125345123
Spliceosome [BR:
plop03041
]
Complex B
Other components
Prp19-related factors
125345123
Complex C
125345123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_3
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
125345123
NCBI-ProteinID:
XP_048193322
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQN
MEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
DTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV
VNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctctctgggttccaacacctacaacaggcagaactgggaggatgcggacttc
cccattctgtgccagacgtgtctcggagaaaacccctacatccgaatgaccaaagaaaag
tatgggaaagaatgcaaaatctgtgccaggccattcacagtgtttcgctggtgccctggg
gtccgcatgcgctttaagaagactgaagtgtgccagacctgcagtaaactgaagaatgtt
tgtcagacctgccttttagaccttgagtatggcttgcccatccaagtccgtgacgcagga
ctctcttttaaagacgacatgccaaagtcagatgtcaacaaagagtactatacacagaat
atggagagagaaatctctaactcggatggaacacgaccagttggcatgctggggaaggcc
acgtctaccagtgacatgctgctcaagctggcccggaccacaccctactacaaaaggaac
cggccccacatttgctccttctgggtgaagggagagtgtaagcgaggagaagagtgtccc
tacaggcacgagaagcctacggatccagacgaccctcttgctgaccagaacattaaggac
cggtattatgggatcaatgaccctgtggcagataagcttctgaagagagcctccaccatg
cctcgcctggacccgccagaggacaagaccatcacgacgctttacgtcggcggtttgggt
gacacaatcaccgagacggatctcaggaatcacttctaccagtttggagagatccggacg
atcaccgtggtgcagagacagcagtgtgctttcatccagtttgccacgagacaggctgcg
gaggtggccgctgagaagtcctttaacaagttgattgtcaatggccgcaggctcaacgta
aaatggggaagatcccaagcagccagaggaaaagaaaaagagaaggacggaaccacagac
tctggcatcaagctagaacctgttcccggcctgccaggagctcttcctcctcctcctgct
gctgaagaagaagcctctgccaactacttcaacctgccccccagtggccccccggctgtg
gtgaacatcgccctgccaccaccccctggcatcgccccgccaccccccccaggtttcggg
ccacacatgttccaccccatgggaccgccgccccctttcatgcgggctccaggaccgatc
cactacccttcccaggacccgcagaggatgggcgcccacgccgggaagcacagcagcccc
tag
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integrated database retrieval system
