Perognathus longimembris pacificus (Pacific pocket mouse): 125345179
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Entry
125345179 CDS
T08928
Name
(RefSeq) LOW QUALITY PROTEIN: probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plop03016
]
125345179
03036 Chromosome and associated proteins [BR:
plop03036
]
125345179
Enzymes [BR:
plop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
125345179
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
125345179
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125345179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
125345179
NCBI-ProteinID:
XP_048193359
LinkDB
All DBs
Position
Unknown
AA seq
1588 aa
AA seq
DB search
MESVLAELLLSPDRDPRAVLAPLCGGEASAERVEALRFLLQRLEARGAGALCAEAAREVA
AGFLVPLLRGRPGAAGAPGPPGPPEPPGRRARVLRAAGAALRSCARLAGAPPLAAALAEE
ALRELRAGPGGAEAALELLAAVGPGLRPREDAPLLGRVARAAAALALAGDAGPEGAAAAR
LLAALGRGGGAALRAVWDALAAPAAPAGPGRLAAELQVLSALAERLLPEPGARPGGPDAR
RCARFWSAVRAGLGRADDALTRRRARFLLRRAVEVSAAPGADRACACADPAGTGPSLFWW
SEKKKDELLKFWETYILIMETLEGNQIHVIKPVLPKLNNLFDYAVSEENGCWLFHPSWHV
CIYKRMFESENKALTKEGVTHFLELYETKPLPFSPELFEFIIGPLMDALSESSLYGRSPG
QPLGSGSPLGLKLQMFLVTYVSLLPEDVKRSFLLKFLQRMTDRHWCAVPILFLSKALASV
PRRRALGTEGLLALRDVMQCTMITHQTLLRGAAQCYLLQTAMHLLDVEQVSLSEVSTFLA
TLRQEESLGRGTTLWAELCEWLHANEQCFRPSPAGCAEPQETSVNAFVRNLVHEYVKSPG
WEAEESCCVPDWSEARLTALMVLLAVDVEGRKTPFSETQRTRNVLRIFLDPLLDVLGKLG
TNAYVPLLRADRCLQLLLELLRASPARAPAAQDDEVPALLENFILSTTESVAPFILRRLT
VDELRGLADLDRCRLHLRVLTQLASLHTKAGWRRGNPVCRIIPPLRNACVRHLQETGDGQ
EPTLARQIQRAVSMAALAAVWEAADQQPALRPEALEAGPVDSFLSALPLNRTLEKPRAEA
RSCARPPGSGGCREELPSSSRGWGRIVAQFIHDQWVCLSFLLKTHQALIPASIGPLRAAL
DALAVLPAGQVSPVFHCLKMLVPGLLASSEPLCSESFDVAWRVTSSSSTTQLTFWPNLKA
FVQFVFDDKVLAAAAKIKGQAYLKIKEIMHSIIEMSALRTGVFNVLIAHCCRTWALAARA
SRGDPWVATSYCELLLEACLFGPVFRRDQRLIQDVQTFIESLGPDCAANVVMESTRREDC
YVRICAVKFLCLLDESDVSQRSFMEELAIRLLDKDELAAKSSARVYENSLQHRLKNRTWQ
TLLVLLPRLGQDFLSGIVERVLRAGFAPGQASVKYSVQWVIVLLLHRFPQFLPSFWGCLS
SGEEKPSASVCTFLSVLSHLDVIIENVPEKKPVLKQALAVAVRWCVSHNFSVRLHALVSL
KKVWQLCGAMGVDERAPWTSVLEGGLSQAGSSHAAGNASRNWQRVQEHFFFARFHPLEDY
CLESVFHSLPRLAGLAEEEWLPLAKFRSFTDLPDAADARWYGSSALRDLPPGTAGSPVDD
TDGWAEGANVQKKIIPWRLGALDAELEVEAQDRAARLGKAVGRLVVVASLLDKPTNLGGL
CRTCEVFGAAALVVGSLQCVHDPQFQHLSVSAEQWLPLLEVKPAQLAEYLQQKKAEGYTI
VGVEQTAKSSELDQYCFPEKSLLLLGNEREGIPARLLQQLDACVEIPQQGVVRSLNVHVS
AALLIWEYTRQWARPARAPPSAEQSPTS
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggtgctggcggagctgctgctgtcgccggaccgggacccccgggccgtgctg
gcgccgctgtgcggcggggaggcgtcggccgagcgcgtggaggcgctgcgcttcctgctg
cagcggctggaggcgcggggcgcgggcgcgctgtgcgcggaggcggcgcgggaggtggcg
gcggggttcctggtgccgctgctgcgcgggcgccccggggccgccggagcccccgggccc
cccgggccccccgagccccccgggcggcgcgcgcgcgtgctgcgggcggcgggcgcggcg
ctgcgctcgtgcgcgcggctggcgggggccccgccgctggccgccgcgctggccgaggag
gcgctgcgggagctgcgcgcggggccgggcggcgccgaggcggccctggagctgctggcg
gccgtcgggcccggcctgcggccccgcgaggacgcgccgctgctggggcgcgtggcgcgg
gccgccgccgccctggcgctggccggggacgcgggccccgagggcgcggcggccgcgcgg
ctgctggcggcgctgggccggggcggcggcgccgcgctgcgggccgtgtgggacgcgctg
gccgccccggcggcgcccgcggggcccggccgcctggccgccgagctgcaggtgctgagc
gcgctggccgagcggctgctgcccgagcccggcgcccgccccgggggccccgacgcgcgg
cgctgcgcccgcttctggagcgccgtgcgggccgggctgggccgcgccgacgacgccctg
acgcgccggcgcgcgcgcttcctgctgcggcgcgccgtggaggtctcggcggcgcccggc
gccgaccgcgcctgcgcctgcgcagaccccgccggcaccggcccaagtctgttttggtgg
tctgagaagaaaaaagacgagcttctaaaattttgggaaacttatattttaattatggaa
accctagaaggaaatcagatacatgttataaagccagtcttaccaaagctaaacaatctg
tttgactatgcagtgtcagaggagaatggctgttggcttttccacccctcctggcacgtg
tgtatttataaaagaatgtttgagagtgaaaacaaagctctgaccaaagaaggcgttacc
cattttctggagctgtatgaaacgaagccacttccattttctccagagcttttcgagttt
attattggcccactgatggacgcgctttcagagagttctctgtatggcaggtccccaggc
cagccgctaggaagtggttctccactgggattaaagttgcagatgtttttagtcacttac
gtttctcttcttcctgaagacgtaaagaggagcttcctcctcaagtttctccagaggatg
acagacagacactggtgtgcggtgcccattctgtttctgtcgaaggctttggcgagcgtg
ccgagacggagggccctgggcaccgaagggctcctggccctcagggatgttatgcagtgt
accatgatcacgcatcagactctgctgagaggagctgcgcagtgctatcttctgcagacc
gctatgcatttgctggatgtggagcaagtgtcactctctgaagtctcgacttttctcgca
actctgaggcaagaggagtctttgggacgaggaaccacactgtgggcagagctctgtgag
tggttacatgctaacgagcaatgctttcggccgtccccagcaggctgtgcggaaccccag
gagacctctgtaaatgccttcgtgaggaaccttgttcacgagtatgtcaagtcaccgggg
tgggaggccgaggaaagctgctgcgtgcctgactggtcagaagcccggctgacagccctg
atggtcctactggctgttgatgtggagggaaggaagacgcccttcagcgagacgcagagg
acgcggaacgtgttgcggatcttcttggaccccctgctggatgtcctggggaagctgggc
accaacgcctacgtgcccttgctgcgggcggacagatgcctccagctgctgctggagctg
ctgcgcgcgagccccgccagagcccccgccgcccaggacgatgaggtgcctgcccttctc
gagaacttcatcttgtccaccacggagagcgtggccccgttcattctcaggagactcacc
gtggacgagctgcggggccttgcagatctggatcgctgccggctccacctgcgggtgctc
actcagctcgccagcctccacacgaaggcggggtggagaagggggaaccccgtttgcaga
atcatccctcctctgaggaacgcgtgcgtgcggcacctgcaggagacgggcgacggacag
gagcccaccctcgctcgtcagatccagagagccgtcagcatggccgccctggccgccgtg
tgggaggccgctgaccagcagcctgcgctccggccggaggccctggaggccgggccggtg
gacagcttcctttctgctcttccgctcaaccggacgctggaaaagccccgcgccgaggcg
cggagctgcgcgcgccccccgggaagcggcggctgccgtgaggagttaccgtcctcgtcc
cgaggatgggggagaatcgtcgcccagttcatccacgaccagtgggtctgcctgtccttc
ctgctgaagacccaccaggccctcatccctgcgtccatcgggcccctgcgggccgcgctg
gacgccctggccgtcctccctgccggccaggtctcacctgtgttccactgcctgaagatg
ctggtccctgggctcctggcctcctctgagccgctctgcagcgagtccttcgacgtggcg
tggagagtgacgtcttcctcgagcaccactcagctgacgttctggcctaatttgaaagcc
tttgttcagtttgtttttgatgacaaagttcttgctgctgccgccaaaatcaagggccag
gcttacctgaaaataaaggagatcatgcacagcatcattgagatgtcggctctgaggacc
ggggtcttcaacgtgctgatagctcactgctgccgcacgtgggcgctggccgcccgtgcg
tcccgcggggacccgtgggtggccacgagctactgcgagctgctcctggaggcctgcctg
ttcggacctgtgttccgccgtgatcagagattgattcaggatgtccagacattcatagaa
agcctggggcctgactgtgcggccaatgtcgtcatggaaagtaccagaagagaagactgt
tacgtgagaatttgtgctgtcaaattcttgtgcttattggatgagtccgacgtttcccag
aggtcgttcatggaggagcttgcgatcaggttactggataaagacgagctggcggccaag
tccagcgcgcgggtgtacgagaactccctgcagcaccggctgaagaaccgcacgtggcag
acgctgctcgtcctcctccccaggctgggtcaggacttcctgagcggaatcgtggagcgg
gtcctgcgggccggcttcgcccccggccaggcttccgtcaagtactcggtgcagtgggtc
atcgtcctgctgctccacaggttcccccagttcctccccagcttctggggctgcttgtcc
tcgggtgaagagaagcccagcgcgagcgtctgcaccttcttgtctgttctgtctcatttg
gacgtcatcattgaaaacgttccggaaaagaagccggtgctgaagcaggcccttgctgtc
gcggtgcggtggtgtgtcagccacaacttcagcgtccggctgcacgcgctggtgtccctc
aagaaagtgtggcagctgtgtggagcgatgggcgtggacgagcgtgcgccgtggacgtcg
gtgctggaggggggcctgagccaggcgggaagctcgcacgccgcagggaacgccagcagg
aactggcagcgcgtccaggagcacttcttctttgcacggttccacccgctggaggactac
tgtctggagagcgtctttcacagcctgccgcggctggcgggcctggcggaggaggagtgg
ctgcccctcgccaagttccgcagcttcaccgacctgcccgacgccgccgacgcccggtgg
tacggctccagcgcgctccgcgacctccccccggggactgccggctctccggtggacgac
acggacggctgggcggagggggccaatgtgcagaagaagatcattccgtggagactcggc
gccttggacgcagagctggaggtggaggcccaggaccgagcggcccggctcgggaaggcc
gtgggcagactcgtcgtagtggcctcgctcctcgacaagcccaccaacttaggagggctg
tgccggacctgcgaggtgttcggggctgccgcgctggtggtgggcagcctccagtgcgtc
cacgacccgcagttccagcacctcagcgtctccgcagagcagtggctgccgctcctggag
gtgaaacccgcacagctggctgagtacctgcagcagaagaaagcagaaggctacaccatc
gtcggggtggagcagacggccaagagctccgagctggaccagtactgcttcccggagaag
tcgctgctcctgttagggaacgagcgggaagggatcccggccaggctgctccagcagctg
gacgcctgcgtggagatcccgcagcagggcgtggtccgctccctgaacgtgcacgtgagc
gcggcgctgctgatttgggagtacacgcggcagtgggctaggcctgcgcgcgccccgccc
tccgcggagcagagccccacgagctga
DBGET
integrated database retrieval system
