KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125345311
Entry
125345311         CDS       T08928                                 
Name
(RefSeq) LOW QUALITY PROTEIN: exonuclease 1-like
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    125345311
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:plop03032]
    125345311
   03400 DNA repair and recombination proteins [BR:plop03400]
    125345311
DNA replication proteins [BR:plop03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    125345311
DNA repair and recombination proteins [BR:plop03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     125345311
SSDB
Motif
Pfam: XPG_I XPG_N XPG_I_2
Other DBs
NCBI-GeneID: 125345311
NCBI-ProteinID: XP_048193499
LinkDB
Position
2:105058140..105066446
AA seq 848 aa
MAVVSGPIKSATIAVSLALLGIQGLLQFIKEASEPVHVRKYKGQVVAVDTYCWLHKGAIA
CAEKLAKGEPTDRYVGFCMKFVNMLLCHGIKPILIFDGCTLPSKKEVERTRRERLQANLL
KGKQLLCEGKVSEAWECFIRAINITHSMAHKVIKAAGSQGVDCLVAPYEADAQLAYLNKA
GIVQAVITEDSDLLEFGCKKVILKMDQFGNGLEIDQAQLGMCRQLGDVFTEEKFRYMCIF
SGCDYLSSLRGIGLTKACKVLRLANNPDIVKVIKKIGHYLXMNITVPEDYIERFIRANNT
FLYQLVFDPVQRKFVPLNAYEDDIDPKTLTXAGKYVDDCIALQIALGNQDINTFEQIDDY
YPDITTASHCRSNSWNEKACPKLPAGNSIWHRNYCPRLELSNASDATQLKEKPSTLGIKQ
VISTKGLNLPRKSSIVKRARSEELPEDDLLNQYSLSFIKKKKSSCGNNKLLNSSEMLVPE
LGDGTTLMESLSTPPKTRNKFATFLQRKNEESGAVVVPGTRSRFFCNSMDSADFASKTVN
TRSINDTAVTNNAANLGDSDCPDLEFQKLVDTNVTHNSSDQISDDVTMFAHEESQSTQTS
KFMRTISPPTLGRLRSCFSWSGSLGEFSRTPGPSAGTALQQPQRKSDSPPCLPVLSEPKS
NESGDEPQPPQETAWYSQSQESTVSSLHSVNASNLSQPSSKDSDSEXSDYNVQSLGSQSN
QTFKQRLSHFSKKDIPLRKKVPWLHNSSSADCLSATKIKPLVPAQVSGLSKKPASIQKRN
HHNSENKPGMQIKISELWKIFGFKKDSEKLPSSKKPLSPVRNNIQLTPEAEKDIFNKPEC
AHVQRAIF
NT seq 2547 nt   +upstreamnt  +downstreamnt
atggctgtagtctctggaccaattaaaagtgccaccatagctgttagtttggcactattg
gggatacaaggattgttacagttcatcaaagaagcttctgaacctgtccatgtgcgaaag
tataaagggcaggtagtagctgtggatacctattgctggcttcacaaaggagctattgca
tgtgctgagaagctagccaaaggtgaacctactgataggtatgtaggattttgtatgaaa
tttgtaaatatgctactatgtcatgggatcaagcctattcttatatttgatggatgtact
ttaccttctaaaaaggaagtggagaggactagaagagaaaggctacaagccaatcttctc
aagggaaagcagcttctttgtgaggggaaagtgtcagaagcctgggaatgtttcatccgt
gccatcaatatcacacactctatggcccacaaagtaatcaaagctgccgggtctcaggga
gttgactgcctggtggctccctatgaagcagatgctcagttggcctatcttaacaaagct
ggcattgtacaagctgtcattacagaagactctgatcttttagaatttggctgtaagaag
gtgattttgaaaatggaccagtttggaaatggcctagagattgatcaggctcagctagga
atgtgcagacaacttggagatgtattcaccgaagagaaattccgttacatgtgtattttt
tcaggctgtgactatctctcatctctgcgtggaattggattgacaaaggcatgcaaagta
ctaagactggctaataatccagatattgtaaaggttatcaagaaaattggccactatctc
naaatgaatataacagtaccagaggactacattgaaagatttattcgagccaacaatact
ttcctttatcagctagtttttgatcctgtccaaaggaaatttgtccctctgaatgcctat
gaagatgacattgatcccaaaacactaacttaggctgggaagtatgtggatgattgtata
gctcttcaaatagcacttggaaatcaagatataaatacttttgaacagattgatgactac
tatccagacattactacggcttcccattgcagaagtaatagttggaatgagaaagcatgt
ccaaagttacctgctggaaatagcatttggcataggaattattgccctagacttgagctg
agtaatgcttcagatgctacgcagttgaaagaaaagccaagtaccttgggaattaaacaa
gtgattagtaccaaaggattaaatctaccaaggaagtcatctatagtgaaaagagcacga
agtgaagagctgccagaagatgatctgttgaaccagtactctctttcatttataaagaag
aagaaaagtagttgtggaaataataaattattgaactcttctgaaatgcttgtgcctgaa
ctgggagatggaactactctaatggaaagcttaagcacaccacctaagacaaggaacaaa
tttgcaacatttttacaaagaaaaaatgaagaaagtggtgcagttgtagttccagggact
agaagcaggtttttctgcaattctatggattctgctgattttgcatcaaagacagtcaac
actcggtctataaatgacaccgctgtcaccaataatgctgctaatcttggtgattcagac
tgtccagacctagaattccagaagttggttgacacaaatgtcacgcataattcaagtgac
cagatttctgatgatgtgactatgtttgcccatgaagagtctcagtctacccaaaccagc
aaattcatgaggactatttcaccacccactctgggaagactaagaagttgttttagttgg
tctggaagtcttggagaattttcaagaactccaggcccctctgcaggcacagcattgcag
caacctcaaaggaagagtgattcccctccgtgcctgcctgttctatctgagccaaagagt
aatgagtcaggtgatgagcctcagcctccacaggaaacagcctggtattcacagtcccag
gaaagcacagtgtcatccctacatagcgtaaatgcatcaaatctttctcagccttctagt
aaggattctgattcagagtaatctgattataatgttcagtcactgggtagtcaaagtaac
cagaccttcaagcaacgtttatctcatttttcaaaaaaggatatacctctaaggaagaag
gttccttggctacataattctagttctgcggactgtctttctgcaaccaagatcaagcct
ctagtaccagcccaagtcagtggactgagcaagaagccagcaagcatccagaagagaaac
catcataactccgagaacaagccaggaatgcagataaaaatcagtgaactctggaaaatt
tttggatttaaaaaagactctgaaaagcttccttcttctaagaagcccctgtctccagtc
aggaataacatacaactcactccagaagcggaaaaggatatatttaacaaacctgaatgt
gcacatgttcagagagcaatattctaa

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