Perognathus longimembris pacificus (Pacific pocket mouse): 125345484
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Entry
125345484 CDS
T08928
Symbol
Cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop02010
ABC transporters
plop04024
cAMP signaling pathway
plop04152
AMPK signaling pathway
plop04530
Tight junction
plop04971
Gastric acid secretion
plop04972
Pancreatic secretion
plop04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125345484 (Cftr)
09132 Signal transduction
04024 cAMP signaling pathway
125345484 (Cftr)
04152 AMPK signaling pathway
125345484 (Cftr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125345484 (Cftr)
09150 Organismal Systems
09154 Digestive system
04971 Gastric acid secretion
125345484 (Cftr)
04972 Pancreatic secretion
125345484 (Cftr)
04976 Bile secretion
125345484 (Cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plop02000
]
125345484 (Cftr)
Enzymes [BR:
plop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
125345484 (Cftr)
Transporters [BR:
plop02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
125345484 (Cftr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
CFTR_R
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
DUF87
AAA_16
DO-GTPase2
T2SSE
Zeta_toxin
MeaB
MMR_HSR1
nSTAND3
AAA_30
NTPase_1
Intein_splicing
Biotin_lipoyl_2
Motif
Other DBs
NCBI-GeneID:
125345484
NCBI-ProteinID:
XP_048193580
LinkDB
All DBs
Position
2:127445019..127590631
Genome browser
AA seq
1527 aa
AA seq
DB search
MIKLGFDKLSSESTALRSLGGWQHWTRCSTMVGLLPGICRSLGSHSAKHKEGAERFKVSV
TWNIWTSPILKKGYRQRLELSDIYQIPSADSADNLSEKLEREWDRELASKKNPKLINALR
RCFFWRFAFYGILLYLGEVTKAVQPLLLGRIIASYDPDNKAERSIAIYLAIGLCLLFIVR
TLLLHPAIFGLHHIGMQMRIAMFSLIYKKTLKLSSRVLDKISIGQLISLLSNNLNKFDEG
LALAHFVWIAPLQVTLLMGLLWDLLQASAFCGLAFLILLALAQAGLGKKMMKYRDQRAGK
INERLVITSEMIENIHSVKAYCWEEAMEKMIENLRQTELKLTRKAAYVRYLNSSAFFFSG
LFVVILSVLPYAFIKGIILRKIFTTISFCIVLRMAVTRQFPGAVQTWYDSLGAINKIQDF
LQKQEYKTLEYNLTTTEVVMENVTAFWEEGFGELFEKAKLNNNNRKISNGDSSLFFSNFS
LLGTPVLKNINFKIEKGQLLAVAGSTGAGKTSLLMMILGELEPSEGKIKHSGRISFCSQF
SWIMPGTIKENIIFGVSYDEYRYRSVIKACQLEEDISKFAEKDSIVLGEGGITLSGGQRA
RISLARAVYKDADLYLLDSPFGHLDVLTEKQIFESCVCKLMANKTRILVTSKMEHLKKAD
KILILHEGSSYFYGTFSELQNLRPDFSSKLMGFDSFDQFSVERRNSILTETLRRFSLEGD
VSASWNESRKQSFKQTGEFGEKRKNSILNSINSARKFSIAQKPPLQMNGIEGDSDESLAR
RLSLVPDSEQGEGNLPRSNMINTGPTFQGRRRQSVLNLMTHSASQGQSIHRRTTASTRKM
SLAPQASLTEMDIYSRRLSQESGVDISEEINEEDLKECFFDDVESIPTVTTWNTYLRYIT
IHKNLIFVLIWSIIIFLIEVAASLVVLWLLKNSPPQDDRNSTKSTNNSYAVIITNTSFYY
IFYIYVGVADSLFALGIFRGLPLVHTLITVSKILHHKMLRSVLQAPMSTLNTLKTGGILN
RFSKDIAILDDLLPLTIFDFIQLLLIVIGAVAVVSVLQPYIFLASVPVIAVFVMLRAYFL
HTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTANWFLYLS
TLRWFQMRIEMIFVLFFIVVTFTSILTTGEGEGSVGIILTLAMNIMNTLQWAVNSSIDVD
SLMRSVSRIFKFIDMPTEEGNSTKPTKPSKDGQLSKVMIIENQLVKKDDIWPSGGQMTVK
DLTAKYVDGGNAILESISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVS
WDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWTDQEIWKVADEVGLRSVIEQFPG
KLDFVLVDGGYVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRALKQAFA
DCTVILCEHRIEAMLECQQFLVIEENRVRQYDSIQKLLSEKSLFRQAISSSDRVKLFPHR
NSSKHKSRSQIAALKEETEEEVQETRL
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaactgggttttgataagcttagcagtgaaagcacagctcttcgctctcttggt
ggctggcagcactggactagatgttccaccatggttggccttcttccaggaatctgtcga
tcattgggttcccacagtgccaagcacaaggaaggtgcagaaaggttcaaggtctctgta
acttggaacatctggaccagcccaattttgaagaaagggtatagacagcgcctagaattg
tcggacatatatcagatcccttctgctgattctgctgacaacctgtctgaaaagctggaa
agagaatgggatagagaattggcttcaaagaaaaatcccaaacttattaacgcccttcga
cgatgttttttctggagatttgcattctatgggatcttactatatttaggggaagtcacc
aaagcagtacagcctctcttattgggaagaatcattgcttcctatgatccagacaacaaa
gcagaacgatccattgccatttacctagccataggcctatgtctgctttttatcgtgagg
acactgctcctacatccagccatttttggtcttcaccacattggaatgcagatgagaata
gctatgtttagtttgatttataagaagactttaaagctatcaagtcgtgtcctagataaa
ataagtattggacaactcattagtcttctttccaacaacctgaacaaatttgatgaagga
cttgccctggcacattttgtgtggattgcacctttacaagtgactcttttgatgggacta
ctctgggacttgttacaggcctctgccttctgtggccttgcttttcttatactccttgct
cttgcccaagctggattaggaaaaaagatgatgaaatacagagatcagagagctggaaag
atcaatgagagacttgtgatcacctcagaaatgattgaaaacattcattctgttaaggca
tactgctgggaggaagcaatggaaaaaatgattgaaaacctaagacaaacagaactaaag
ttgacccggaaggcagcctatgtgagatacttaaatagctcagccttcttcttctcaggg
ttgtttgtggtgattttgtctgtgcttccctatgcattcatcaaaggaatcatccttcga
aaaatattcacaaccatctccttctgcattgttctgcgcatggcagtcaccaggcaattc
cctggggctgtacaaacgtggtatgactctcttggagcaataaacaaaatacaggatttc
ttacaaaagcaagagtacaagacattggaatataacctaacaactacagaggtagtgatg
gagaatgtaacagccttttgggaagagggttttggggaattatttgagaaagcaaaacta
aacaacaataacagaaagatttccaacggtgacagtagtctcttcttcagtaacttttcc
cttcttggtactcctgtcctgaaaaatatcaatttcaagatagagaaaggacagttattg
gcagttgctggatctactggtgcaggcaagacatcactcctaatgatgattttgggagag
ctggagccttcagagggtaaaataaagcacagtggaagaatttcattctgttctcagttt
tcctggatcatgcctggtaccattaaagaaaacattatttttggtgtttcctatgatgag
tatagatacagaagtgtcatcaaagcatgtcaactggaagaggatatctcaaagtttgca
gagaaagacagcatagttcttggagaaggtggaatcacactgagtggaggtcaacgagca
aggatttctttggcaagagcagtgtacaaagatgctgatttgtacctcttagactcccct
tttggacacctagatgttttaactgaaaaacaaatatttgaaagctgtgtctgtaaattg
atggctaacaaaactaggattttggtcacttctaaaatggaacatttaaagaaagctgac
aaaatattaattttacatgagggtagcagctatttttatgggacattttctgaactccaa
aacctacgtccggactttagttcaaaactcatgggatttgattctttcgaccaatttagc
gtggaaagaagaaattcaatcctaactgagaccttacgccgtttctccttagaaggagat
gtctctgcctcctggaacgaatccagaaaacaatcttttaaacagactggagaattcgga
gaaaaaaggaagaactctatcctcaattcaatcaactctgcaaggaaattttcaattgca
cagaagcctccgttacagatgaatggcattgaaggggattctgatgagtccttagcaaga
aggttgtccctggttccagattctgagcagggagaggggaacttacctcgcagcaacatg
atcaacacgggccctacatttcaaggtcggaggagacagtctgttctgaacttgatgaca
cactcagctagccagggccagagcattcaccggaggaccacagcatctacacgaaaaatg
tccctggctcctcaggcaagcttaactgagatggacatatattcaagacgcttatctcaa
gagagtggtgtagatattagtgaagaaattaatgaagaagatttaaaggagtgttttttt
gatgatgtagagagcataccaacagttactacgtggaatacatatcttcgatacatcact
atccacaagaacttgatttttgtgctaatttggagcataattatttttctcattgaggta
gctgcttctttggttgtgctgtggttacttaaaaacagccctcctcaagatgatagaaac
agcactaaaagtacaaacaacagctatgctgtgattatcaccaacaccagcttctattac
attttttacatttatgtgggagtggccgacagtttatttgctctgggaatcttcagaggt
ttgccactggtacacacactgatcacggtgtcaaaaattttacaccacaaaatgttacgt
tctgttcttcaagcacccatgtcaaccctcaacacactgaaaacaggtgggattctcaat
agattctccaaagatatagcaattttggatgaccttctgcctcttaccatatttgacttc
attcagctgctattaattgtgattggggcagtggccgtagtgtccgttttacaaccctac
atcttcctagcatctgtgccagtgatagcggtctttgtcatgctgagagcttattttctc
cacacctcccagcagctcaaacaactggagtctgaaggcaggagcccaattttcactcat
cttgtgacaagcttaaaaggattatggacacttcgtgcctttggacgtcagccttatttt
gaaacattgttccacaaagctttgaatttacacactgccaactggttcttgtatctgtca
acactgcgctggttccagatgagaatagaaatgatttttgttctcttcttcattgttgtt
accttcacttccattttaaccacaggtgaaggagaaggatcagttggtattattctaact
ttagccatgaatatcatgaacacattgcaatgggctgtgaactctagcattgatgtggat
agcttgatgcgctctgtgagccggatctttaagtttattgacatgccaacagaagaaggt
aactctaccaaaccaacaaaaccatccaaagatggccagctctcaaaggttatgattatt
gaaaatcagctggtgaagaaagatgacatctggccttcaggaggccaaatgactgtcaaa
gacctcacggcgaaatacgttgatggtgggaacgccatattagagagcatttccttctca
atcagtcctggccagagggtaggcctcttaggaagaactggatcagggaagagcactttg
ttatcagcttttttgaggcttctgaacactgaaggagaaatccagattgatggtgtgtct
tgggattcaataactttgcaacagtggcggaaagccttcggagtaatacctcagaaagta
tttatcttttctggaacatttagaaaaaacttggatccctatgaacagtggactgatcaa
gaaatatggaaagttgcagatgaggttggactcagatctgtgatagaacagtttcctggg
aagcttgactttgtccttgtggatgggggttatgtgctaagccatggtcacaagcagttg
atgtgcttggccaggtctgttctcagcaaagcaaagatcttactgcttgatgaacccagt
gctcatttggatcccataacctatcaaataattcgaagagctctaaagcaagcatttgcc
gattgcacagttatcctgtgtgaacacaggatagaagcaatgttggaatgtcaacaattt
ttggtcatagaagagaacagagtgaggcagtatgattccatccagaagcttctgagtgag
aagagcttgttccgacaggccatcagctcctcagacagggtcaagctctttccccaccgc
aactctagcaagcacaagtctcgatcccaaattgcagctctgaaggaggagacagaggaa
gaggtccaagaaacccgactctag
DBGET
integrated database retrieval system
