Perognathus longimembris pacificus (Pacific pocket mouse): 125345700
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Entry
125345700 CDS
T08928
Symbol
Ncbp1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03013
Nucleocytoplasmic transport
plop03015
mRNA surveillance pathway
plop03040
Spliceosome
plop05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125345700 (Ncbp1)
09122 Translation
03013 Nucleocytoplasmic transport
125345700 (Ncbp1)
03015 mRNA surveillance pathway
125345700 (Ncbp1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125345700 (Ncbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125345700 (Ncbp1)
03041 Spliceosome [BR:
plop03041
]
125345700 (Ncbp1)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
125345700 (Ncbp1)
Spliceosome [BR:
plop03041
]
Common components
Common spliceosomal components
Cap binding complex
125345700 (Ncbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
DUF1690
Cob_adeno_trans
DUF2524
Motif
Other DBs
NCBI-GeneID:
125345700
NCBI-ProteinID:
XP_048193703
LinkDB
All DBs
Position
1:133014757..133048704
Genome browser
AA seq
790 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKTSDANKTEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNLGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERQTCAAKLLSYPGKSKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMSTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDLESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLSVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLASKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSILTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggaggcggcacagcgacgagaacgacggtggacagcctcacaaaaggagaaag
acctctgatgcaaataaaaccgaagatcatttggagtctttaatatgtaaagtaggagaa
aagagtgcctgctctttggagagcaacctagaaggcttggctggcgtattagaagctgat
cttcctaactacaagagcaagatcttaaggcttctttgtacagttgcacgtctactacct
gagaagctgacaatttatacaacattagttggactgctgaatgctagaaattacaacctc
ggtggagaatttgtagaagcaatgattcgtcaacttaaagagtcattgaaagcaaacaat
tacaatgaagctgtctatttggttcgttttttatctgatcttgtgaattgtcatgtgatt
gctgccccatcaatggttgctatgtttgaaaattttgtaagtgtaactcaggaagaagat
gtacctcaggtgcgacgagattggtatgtgtatgcgtttctgtcatctttgccctgggtt
ggaaaggagttatatgaaaagaaagatgcagagatggaccgaatctttgccaacactgaa
agctatctaaaaaggcgccagaagacacatgtgcccatgttgcaagtatggactgctgat
aagccacacccacaagaagagtatttagattgcctctgggcccagattcagaaattgaaa
aaggatcgctggcaggaacggcacatcctaagaccttatcttgcctttgacagcatcctc
tgtgaagcactacagcataatctgcctcctttcacaccacctcctcacactgaagattca
gtgtacccgatgcccagggttatcttcagaatgtttgattacacagatgatcccgagggt
cctgtcatgccagggagtcattcagtggagaggtttgtcatagaagagaatctccactgc
atcattaagtcccactggaaagaaaggcagacttgtgctgcaaaactcctgagctaccca
ggaaagagcaagatccccttgaactaccacatagtggaggtgatctttgcagagctgttt
cagctcccagcgccccctcacattgatgtgatgtataccacgctgctcattgagctgtgc
aaactgcagcctggctctctccctcaagttcttgcacaagcaactgaaatgttatacatg
cgtctggacacaatgagtaccacttgcgtggacaggtttattaattggttttctcatcat
ctaagtaattttcagttccgttggagctgggaagattggtcagattgtcttactcaagat
cttgaaagtcccaaaccaaagtttgtaagagaagttctagaaaaatgtatgaggttgtct
taccatcagcgtatattagatattgttcctcctaccttctcagctctatgtcccgcaaac
ccaacctgcatctacaagtatggagatgaaagtagcaattctcttcctggacattctgtg
gccctctgtttatctgttgcctttaaaagtaaagcaaccaacgatgaaatcttcagcatt
ctgaaagatgtaccaaatcctaaccaggatgatgatgatgatgaaggattcagttttaac
ccattgaaaatagaggtctttgtacagactctgcttcatttggcatccaaatcgttcagc
cactccttcagtgctcttgcaaagtttcatgaagtcttcaaaaccctagcagagagtgat
gaggggaagctacatgtgttgagagttatgtttgaggtttggaggaaccacccacagatg
attgctgtcctggttgataagatgattcgcacacagatagttgactgtgctgcagtagca
aactggatcttctcttcagagctgtctcgtgactttacaagattgtttgtttgggaaatc
ttgcactccacaatccgcaagatgaacaaacacgttttgaagatccagaaagagctagaa
gaagctaaagagaaactggcaaggcaacacaaacggcgaagtgatgatgatgacagaagc
agtgacaggaaagatggggcccttgaggaacaaatagagagactgcaggaaaaagtcgaa
tctgcgcagagtgagcagaagaacctgttccttgtaatatttcagcgttttatcatgatc
ttgaccgagcacttagtacgatgtgaaactgatgggaccagtatattaacaccgtggtat
aagaactgtatagagagactccagcagatcttcctacagcatcaccagataatccagcag
tatatggtaaccctggagaacctgcttttcaccgcagagttagaccctcacatcctggct
gtgttccagcagttctgtgctctgcaggcctga
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integrated database retrieval system
