KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125345721
Entry
125345721         CDS       T08928                                 
Symbol
Shh
Name
(RefSeq) sonic hedgehog protein
  KO
K11988  sonic hedgehog
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04340  Hedgehog signaling pathway
plop04360  Axon guidance
plop05200  Pathways in cancer
plop05205  Proteoglycans in cancer
plop05217  Basal cell carcinoma
plop05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:plop00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    125345721 (Shh)
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    125345721 (Shh)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    125345721 (Shh)
   05205 Proteoglycans in cancer
    125345721 (Shh)
  09162 Cancer: specific types
   05226 Gastric cancer
    125345721 (Shh)
   05217 Basal cell carcinoma
    125345721 (Shh)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:plop01002]
    125345721 (Shh)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:plop00536]
    125345721 (Shh)
Peptidases and inhibitors [BR:plop01002]
 Cysteine peptidases
  Family C46: hedgehog family
   125345721 (Shh)
Glycosaminoglycan binding proteins [BR:plop00536]
 Heparan sulfate / Heparin
  Morphogens
   125345721 (Shh)
SSDB
Motif
Pfam: HH_signal Hint Peptidase_M15_3 Vint VldE Ribosomal_S6e DrmE_C
Other DBs
NCBI-GeneID: 125345721
NCBI-ProteinID: XP_048193722
LinkDB
Position
2:complement(152790896..152798704)
AA seq 451 aa
MLPPARCLRLLLLSALLVGAGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPGV
KLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGWATVHLEQGGTKPVRDLRPGDRVLAADAQGRLLYSDFLA
FLDRDDGARKVFYVIETRGPRARLLLTAAHLLFVAPAPRNASARAGPPGRRALFASRVRP
GQRVYVAASGRGGERRLRPAAVHRVTLREEAAGAYAPLTAHGTILVNRVLASCYAVIEEH
GWAHRAFAPFRLAHALLAALAPARTDGDGDGGGDARRAPGPGLPGPPAPPAPRAPPASSG
VHWYSQLLYHLGTWLLDSEALHPLGMAAPAR
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgctgccgcccgccagatgcctgcggctgctgctgctctccgcgctgctcgtgggcgcc
gggctggcgtgcgggcccggccggggcttcgggaagaggcggcaccccaaaaagctgacc
ccgttagcctacaagcagttcatccccaacgtggcggagaagacgctgggggccagcggg
cgctacgagggcaagatctcccgcaactccgagcgcttcaaggaactcacccccaattac
aaccccgacatcatcttcaaggatgaggagaacaccggcgccgaccggctcatgactcag
aggtgtaaggacaagctgaacgccctggccatctcggtgatgaaccagtggcccggcgtg
aagctgcgggtgacggagggctgggacgaggacggccaccactccgaggagtcgctgcac
tacgagggccgcgcggtggacatcaccacgtcggaccgggaccgcagcaagtacggcatg
ctggcgcgcctggcggtggaggccggcttcgactgggtctactacgagtccaaggcgcac
atccactgctcggtgaaagcagagaactcggtggcggccaagtcgggcggctgcttcccc
ggatgggccacggtgcacctggagcagggcggcaccaagccggtgcgggacctgcggccc
ggggaccgcgtgctggcggcggacgcgcagggccggctgctgtacagcgacttcctggcc
ttcctggaccgcgacgacggcgcgcgcaaggtcttctacgtgatcgagacgcgggggccg
cgcgcgcgcctgctgctcaccgccgcgcacctgctcttcgtggcgcccgcgccgcgcaac
gcctcggcccgggcggggccgccggggcgccgcgcgctcttcgccagccgcgtgcggccc
ggccagcgcgtgtacgtggcggcgtccgggcgcggcggggagcggcggctgcggccggcg
gcggtgcaccgcgtgacgctgcgggaggaggcggcgggcgcgtacgcgccgctcacggcg
cacggcaccatcctcgtcaaccgggtgctggcctcgtgctacgccgtcatcgaggagcac
ggctgggcgcaccgcgccttcgcgcccttccgcctggcgcacgcgctgctggccgcgctg
gcgcccgcgcgcacggacggcgacggcgacggcggcggggacgcgcggcgcgcgcccggc
cccgggctcccgggcccccccgcccccccggcgccccgggccccgccggcctcctcgggc
gtccactggtactcgcagctgctctaccacctgggcacctggctgttggacagcgaggcc
ctgcaccccctgggcatggcggccccggcccgctga

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