Perognathus longimembris pacificus (Pacific pocket mouse): 125345874
Help
Entry
125345874 CDS
T08928
Symbol
Opn1sw
Name
(RefSeq) short-wave-sensitive opsin 1
KO
K04252
short wavelength-sensitive opsin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
plop04030
]
125345874 (Opn1sw)
G protein-coupled receptors [BR:
plop04030
]
Rhodopsin family
Vision
Opsin
125345874 (Opn1sw)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7tm_4
WBP-1
Motif
Other DBs
NCBI-GeneID:
125345874
NCBI-ProteinID:
XP_048193878
LinkDB
All DBs
Position
2:complement(135317620..135320344)
Genome browser
AA seq
346 aa
AA seq
DB search
MSGEEDFYLFKNTSSVGPWDGPQYHIAPVWAFQLQAAFMGFVFFAGTPLNATVLVATLHY
KKLRQPLNYILVNVSLGGFLFCIFSVFTVFIASCHGYFLFGRHVCAMEAFLGSVAGLVTG
WSLAFLAFERYIVICKPFGNFRFNSRHALIVVLATWTIGIGVSIPPFFGWSRFIPEGLQC
SCGPDWYTVGTKYHSEYYTWFLFLFCFIVPLSLICFSYSQLLRTLRAVAAQQQESASTQK
AEREVSRMVVVMVGSFCLCYVPYAALAMYIVNNRNHGLDLRLVTIPAFFSKSSCVYNPII
YCFMNKQFRACIMEMVCRKPMTDESEMYSSQKTEVSTVSSSKVGPN
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggggaggaggacttttatctgttcaagaacacttcgtccgtgggcccctgggat
ggacctcagtaccacattgcccctgtctgggccttccaactccaggcagccttcatgggt
tttgtcttctttgcagggacaccactcaatgccacagtgttggtggctacactacactat
aaaaagttgcgacagccactcaactacattctggtcaatgtgtccctggggggctttctc
ttctgcatcttttctgtcttcactgtcttcatcgccagctgtcatggatacttcttattt
ggtcgccatgtttgcgctatggaggccttcctgggatctgtagcaggtctggtcacaggc
tggtcactggctttcctggccttcgagcgctacattgtcatctgtaaaccctttggcaac
ttccgcttcaactccaggcatgcactgatagtggtcctggctacctggaccattggcatt
ggcgtctccattccaccattctttggctggagccggtttatccctgagggtctccagtgc
tcctgtggtcctgactggtacaccgtgggcaccaaatatcacagcgagtactacacctgg
ttcctctttctcttctgcttcatcgtgccactctccttaatctgcttctcctactctcag
ctgctgaggactctccgagctgtggcagcccagcagcaagagtcagcttcaactcagaag
gcggagcgggaggtgagccgcatggtggtggtgatggtgggatccttctgtctctgctat
gtgccctatgctgcactggccatgtacatagtcaacaaccgtaaccacgggctggactta
cggcttgtgaccatccctgccttcttctccaagagctcttgtgtctacaatcctatcatc
tactgcttcatgaataagcagttccgagcttgtatcatggagatggtgtgtagaaagcct
atgacagatgaatctgagatgtacagctcccagaaaacagaagtttcaacagtctcgtcc
agcaaagttggtcccaactaa
DBGET
integrated database retrieval system
