Perognathus longimembris pacificus (Pacific pocket mouse): 125346022
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Entry
125346022 CDS
T08928
Symbol
Atrnl1
Name
(RefSeq) attractin-like protein 1
KO
K24332
attractin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
plop04091
]
125346022 (Atrnl1)
Lectins [BR:
plop04091
]
C-Type lectins
Others
125346022 (Atrnl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_5
Kelch_1
Kelch_3
EGF_LMN_ATRN
Kelch_4
Kelch_6
CUB
Kelch_2
PSI
EGF_TEN
NANM
EGF_Teneurin
EGF_laminin
EGF_2
PSI_integrin
TMEM100
Motif
Other DBs
NCBI-GeneID:
125346022
NCBI-ProteinID:
XP_048194138
LinkDB
All DBs
Position
2:complement(11757197..12184319)
Genome browser
AA seq
1378 aa
AA seq
DB search
MEPGGQARTGVPQPAAPGLWRARPAGGGGGGGASSWLLDGNSWLLCYGFLYLALYAQVSQ
SKPCERTGSCFSGRCVNSTCLCDPGWVGDQCQHCQGRFKLTEPSGYLTDGPINYKYKTKC
TWLIEGYPNAVLRLRFNHFATECSWDHMYVYDGDSIYAPLIAVLSGLIVPEVRGNETVPE
VVTTSGYALLHFFSDAAYNLTGFNIFYSINSCPNNCSGHGKCTTSVSVASQVYCECDKYW
KGEACDIPYCKANCGSPDHGYCDLTGEKLCVCNDSWQGPDCSLNVPSTESYWVLPNVKPF
SPSVGRASHKAVSHGKFMWVIGGYTFNYSSFQMVLNYNLESSIWNVGALSRGPLQRYGHS
LALYQENIFMYGGRIETNDGNVTDELWVFNIHSQSWSTKTPTVLGHGQQYAVEGHSAHIM
ELDSRDVVMIIIFGYSAIYGYTSSIQEYHISSNTWLVPETKGAIVQGGYGHTSVYDEITK
SIYVHGGYKALPGNKYGLVDDLYKYEVNTKIWTILKESGFARYLHSAVLINGAMLIFGGN
THNDTSLSNGAKCFSADFLSYDIACDEWKTLPKPNLHRDVNRFGHSAVVINGSMYIFGGF
SSVLLNDILVYKPPNCKAFRDEELCKNAGPGIKCFWNKNHCESWESGNNILRAKCPPKTA
ASDDRCYRYADCASCTANTNGCQWCDDKKCISANSNCSVSVRNYTKCHVRNEQICNKLTS
CKSCSLNLNCQWDQRQQECQALPAHLCGEGWNHIGDACLRLNSSRESYDNAKLYCYNLSG
NLASLTTLKEVEFVLDEIQKYTQQKVSPWVGLRKINISYWGWEDMSPFTNTTLQWLPGEP
NDSGFCAYLERAAVAGLKANPCTSMADGLVCEKPVVSPNQNARPCKKPCSLRTTCSNCTS
NGMECMWCSSTKRCVDSNAYIISFPYGQCLEWQTATCSPQNCSGLRTCGQCLEQPGCGWC
NDPSNTGRGHCIEGSSRGPMKLVGMHNSEMILDTNLCPKEKNYEWSFIQCPACQCNGHST
CVNSNVCEQCKNLTTGKQCQDCMPGYYGDPTNGGQCTACTCSGHANICHLHTGKCFCTTK
GIKGDQCQLCDSENRYVGNPLRGTCYYSLLIDYQFTFSLLQEDDRHHTAINFIANPEQSN
KNLDISINASNNFNLNITWSMGSTGGTISGEETPIVSKTNIKEYRDSFSYEKFNFRSNPN
ITFYVYVSNFSWPIKIQIAFSQHNTIMDLVQFFVTFFSCFLSLLLVAAVVWKIKQTCWAS
RRREQLLRERQQMASRPFASVDVALEVGAEQTAFLRGPLEGAPKPIAIEPCTGNRAAVLT
VFLCLPRGSSGAPPPGQSGLAIASALIDISQQKASENKDKTSGVRNRKHLSTRQGTCV
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggagccggggggtcaggcccgcaccggggtcccgcagccggccgccccggggctgtgg
agggctcggccggcgggcggcggcggcggcggcggcgcctcctcctggctgctggacggg
aacagctggctactgtgctatggcttcctctacctggcgctctacgcgcaggtgtcccag
tccaagccctgcgagcggaccggctcctgcttttcgggccgctgtgtcaactccacctgc
ctctgcgacccgggctgggtgggggaccagtgccagcactgccagggcaggttcaagtta
acagaaccttctggatatttaacagatggtccaattaactataagtataaaactaagtgt
acatggctaattgaaggctacccaaatgcagtgttaagattaagattcaatcattttgct
acagaatgtagctgggatcatatgtatgtttatgatggagattcaatatatgcaccttta
atagctgtattgagtggtttgatagtccctgaagtaaggggaaatgaaactgtgcctgaa
gttgttacaacttctggctatgcactgttacacttttttagtgatgctgcgtataacctg
actggtttcaacattttttactcaatcaattcttgccctaataattgctctggtcatggg
aagtgtacaactagtgtctctgttgcaagtcaagtgtattgtgaatgtgataagtactgg
aaaggtgaagcttgtgatattccttactgtaaagccaattgtggcagcccagatcatggc
tattgtgatctaacaggagaaaaattgtgcgtctgcaatgatagctggcaaggtcccgat
tgctctttgaatgttccctccactgaatcttactgggttttgccaaatgttaaacccttc
agtccttctgtaggtcgggcttcacataaagcagtttcacatgggaaattcatgtgggta
attggtggatatacttttaactacagttcttttcaaatggtcttgaattacaacttggaa
agcagtatatggaatgtaggagctctatcaaggggacctctccagagatatggacactcc
cttgctttatatcaggaaaacatctttatgtatggaggaagaattgaaacaaatgatggc
aatgtcactgatgaattatgggtttttaacatacatagtcagtcttggagcacaaaaact
cctactgttcttggacacggtcagcagtatgctgtggagggacattcagcacatattatg
gagctggacagtagagatgttgtaatgataataatatttggatattctgcaatttatggt
tatacaagcagcatacaagaataccatatctcctccaacacttggcttgttccagaaact
aaaggagctattgtacaaggtggatatggccatacgagtgtgtatgatgaaataacaaag
tccatttatgttcatggaggctataaagcattaccaggcaataagtacggattggtagat
gatctttataagtatgaagttaacactaagatttggactattttgaaagaaagtgggttt
gccagataccttcattcagctgttcttatcaatggagctatgcttattttcggaggaaat
acccataatgacacttccttgagtaatggtgcaaaatgtttttctgccgatttcctgtca
tatgacatagcttgtgatgaatggaaaacattaccgaaaccaaatcttcatagagatgtt
aacagatttggacactctgctgtagtcattaacgggtccatgtatatatttggtggattt
tctagcgtactccttaatgatatccttgtttataagcctccaaattgcaaagctttcaga
gatgaagaactttgtaaaaatgctgggccagggataaaatgtttttggaataaaaatcac
tgtgaatcttgggaatctggaaataatattcttagagcaaagtgcccccctaaaacagct
gcttctgacgacagatgttacagatacgcagattgtgccagttgtactgccaatacaaat
gggtgccaatggtgtgatgacaagaaatgtatttcagcaaacagtaactgcagtgtgtct
gtcagaaactataccaaatgtcatgtgagaaatgaacagatttgtaacaaacttacaagc
tgtaaaagctgctcactgaacttgaattgccaatgggatcagcggcaacaggaatgccag
gctttgccagctcatctttgtggagaaggatggaatcatattggggatgcttgccttaga
ctcaattccagtagagaaagctatgataatgcaaaactttattgctataatcttagtggg
aatcttgcttcattaacaaccttaaaagaagtggaatttgtactggatgaaatacagaag
tatacacagcagaaagtatcaccgtgggttggtttgcgcaaaatcaatatatcctactgg
ggatgggaagacatgtctccttttacaaatacaacattacagtggcttcctggagaacca
aatgattctggattctgtgcatatttagaaagggctgctgtagcaggcttaaaagcaaat
ccttgtacgtctatggcagatggccttgtctgtgaaaagcctgttgttagtccaaaccaa
aatgcaaggccatgtaaaaagccatgctctctaaggacgacatgttccaactgtacgagc
aatggcatggaatgtatgtggtgtagcagtacaaagcgatgtgttgactctaatgcttac
ataatctcatttccatatggacagtgtctggagtggcaaactgccacctgctctcctcaa
aattgttctggattgagaacttgtggacagtgtttggaacagcctggatgtggctggtgc
aatgatcctagtaatacaggaagaggacactgcattgaagggtcttcaaggggaccaatg
aagcttgttgggatgcacaacagtgaaatgattcttgacaccaatctttgccccaaagaa
aaaaactatgagtggtcctttatccaatgtccagcttgccaatgtaatggacatagcact
tgtgtcaacagtaatgtgtgcgaacagtgtaaaaatctcaccacaggaaaacaatgccaa
gactgcatgccaggttattatggagatccaaccaatggtggacaatgtacagcttgtaca
tgtagtggccatgcaaatatttgtcatctacatacaggaaaatgtttctgtacaaccaaa
ggaataaaaggtgatcaatgccaattatgtgattctgaaaatcgttatgttggtaatcca
cttagaggaacatgttattacagccttttgattgactatcagtttaccttcagcttactg
caagaagatgatcgccaccacactgccataaacttcatagctaacccagaacagtcaaac
aaaaatttggatatttcaattaatgcatcgaacaactttaatctcaacatcacatggtca
atgggttcaacaggtggaacgatatctggggaagaaactcctatagtttccaagactaat
ataaaagaatacagagatagtttttcctatgaaaaatttaactttagaagcaatcctaat
attacattctatgtgtacgtcagcaacttttcctggcctattaagatacagattgcattc
tcacaacacaatacaatcatggatcttgtgcagttttttgtcaccttcttcagttgtttt
ttatccttattacttgtggctgctgttgtatggaagatcaagcaaacttgttgggcttct
cgacgaagagagcaactgcttcgagaacgacagcagatggccagccgtccctttgcttct
gttgatgtagcactggaagtaggagctgaacaaacagcctttctgcgagggccattagag
ggggcacccaaaccaatagccattgaaccatgtactggaaacagagctgctgttttgact
gtgtttctttgtctaccaagaggatcatctggtgccccgccccctgggcagtcaggcctc
gctattgccagtgccctgatagacatttcacaacagaaggcttcagagaataaagacaag
acttccggcgtccgaaatcgaaaacatctgtccacacgtcaaggaacttgtgtctga
DBGET
integrated database retrieval system
