Perognathus longimembris pacificus (Pacific pocket mouse): 125346036
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Entry
125346036 CDS
T08928
Symbol
Tdrd1
Name
(RefSeq) tudor domain-containing protein 1 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125346036 (Tdrd1)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Gene silencing
piRNA pathway
125346036 (Tdrd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
zf-MYND
Motif
Other DBs
NCBI-GeneID:
125346036
NCBI-ProteinID:
XP_048194160
LinkDB
All DBs
Position
2:complement(12833126..12874406)
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AA seq
1184 aa
AA seq
DB search
MDVTLVPNMMPRNSLEVSTCKMTEPFNFEKNESKLPSHDSLRSPGAHHNHPSFRLKSPEN
GSKKDNFLLCEQTKQYLSSQEDNSVSSNPIGINGEVVGSKGDRKIMPTGNAVLPLSLGNN
SPSKEVKTPSDDDVPLTKSKKLYKLAENSLSINNPALFNSLGPPLRSTTCHCCGLFGSLR
CSQCKQTYYCSTTCQRRDWSAHSIVCKPVQQNLHKLEENKSPFDTKNIEVKNESDCPLGV
AKEISVGTEKTMFSDLKSLQLKKTMEVKGTVTEFKHPGDFYIQLYSSEVLEYMNQLSASL
KETYANMVHEEDYMPVKGEVCVAKYTVDQTWNRAVIQEVDVLQKKAQVLYIDYGNDEIIP
IDRIHPLCRNTNLFPPCAIKCFVAGIVPAEEDWSNDCIKTVKSLLMDQYCSIKIIDVLNE
DVLTYAVDIMLQSSGKLLDHVLVEMGYGLKPKEQNSKKQSADQGDPDDIGKMTAENKIVI
ERSALIPKALTLNVGNEFCGVVAHIQTPEDFFCQQLQSGHMLAELQASLSEYCNQVSQRS
GFYPTIGDICCAQFSEDDQWYRASVLAYASDESVLVGYVDYGNFEILSLTRLCRITPKLL
ELPMQALKCVLAGVKPSLGVWTPEAICLMKKVVQNKMVMVKVVDRLENSSLVELIDTSVT
PNMSVAKVLIDAGFAVEDKELVAEKTSDTVRTSAPLRLEEKVDVLEWTWVELAIDETVDV
VICMLYNPGEFYCHILKEDVLKTLSDLNKSLAEYCQQKSPNGFKAEIGQPCCAFFAGDGN
WYRALIKEILPNGNVKVHFVDYGNIEEVTTDELRMIPSKFLRLPFQGIQCWLVDIQPKNK
HWTKEAIARFQMCVRGTKLQARVVEMTEKGVGVELTDLSTSYPKIISDILTSEHLVLRCG
SPHTYLRNRRPASKYNHQTDTQELQGNTPVSSADQWKTIELPVHKTVQANILEIVNPNLF
YAVSSEMPDNQEKLSTLTAELLEYCNSQKSRPSYRPRIGDACCAKYTSDDFWYRAIVLAT
SDSDVKVLYADYGNIETLPLSRVQPILASHLELPFQIIKCSLEGLTELNGSCSQLMIELL
KNFMLNQHVMLSVKRIAKNVHTVSVEKCSENGTINVAEKLVMHDLTQNMALKPSALNKDK
THGRNCCCTELQKQVEKHEQILLFLLNNPTNPSKFIEMKNLLKR
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggatgttacattagtgcctaatatgatgccaagaaatagtttggaagtatctacttgt
aagatgacagagccatttaattttgagaaaaatgaaagcaagcttccatcacacgattct
ttaagaagtcctggagcacaccataaccatccgagtttcaggttgaaaagcccagagaat
gggagtaaaaaagacaattttttgctttgtgagcaaaccaaacaatatttatctagtcag
gaagacaattcagtatcttcaaatcctattggtatcaatggagaagtggttggatccaaa
ggagacaggaagataatgccaacaggtaatgcagtgttaccactaagtcttggaaataat
tcaccatccaaagaagtaaaaactcccagtgatgatgatgtacctcttacaaagtccaaa
aaattatacaagttggccgaaaattccttgtccataaataatccagcactcttcaactct
ttaggacctcctttgcggtcaacaacctgccattgctgcggcctgtttgggtcgctgaga
tgttctcagtgcaagcagacctactattgctccaccacatgtcagaggagagactggtct
gcccacagcatcgtgtgcaagcctgtccagcaaaatttgcacaaacttgaagagaacaaa
tcaccttttgacacaaagaacattgaagtgaaaaatgagagtgactgtccccttggagta
gctaaagaaatatctgttggtactgagaaaacaatgttttctgatttgaaaagtctacaa
ctcaagaaaaccatggaagtgaagggtacagttacagaattcaagcacccaggtgacttt
tacatccagttatattcttcagaagttttagaatacatgaaccagctctcagcaagcttg
aaagaaacatatgcaaatatggtgcatgaggaagattacatgcccgttaaaggagaagtt
tgtgttgccaagtacactgtcgatcagacctggaacagagcagtaatccaagaggtagat
gtgctacagaagaaagcacaagtcttgtatattgattatggaaatgatgaaataattcca
atagacagaattcatccactgtgtagaaacacgaacttgtttccaccctgtgccataaag
tgctttgtggctggcattgtgcccgcagaggaggattggagcaatgattgtatcaaaact
gttaaatcactgttaatggaccagtactgttctataaagattattgatgtcttaaatgag
gatgtgcttacctatgcagtagacattatgctgcaaagttcaggaaaactcctagaccat
gtgcttgtagaaatgggatatggtttgaaacccaaagaacagaattctaagaagcaaagt
gcagatcagggtgatcctgacgacattgggaaaatgacggctgaaaacaaaattgtgata
gagagaagtgcgctcatccccaaggccctcaccctgaatgtgggaaacgagttctgcggg
gtagtcgctcacattcagacaccagaggacttcttttgtcaacaactacaaagcggtcac
atgcttgctgaactccaggcatctcttagtgagtactgtaatcaagtgtctcaacgttcc
ggcttttatccaaccattggtgacatatgttgtgcccagttctcagaggatgaccagtgg
tatcgggcgtctgtcctggcctatgcttctgacgagtctgtcctggttggatatgttgat
tatggaaactttgaaatccttagcttgacaagactttgtcgtattactccaaagttgttg
gaactgccgatgcaagctctcaagtgtgttctggctggagtaaagccatcattgggagtt
tggactccagaagctatttgcctcatgaaaaaagtggttcagaacaaaatggttatggtg
aaagtggtggacaggctggaaaatagctccctggtggagctaatagatacatctgtgact
ccaaacatgagcgtggccaaagttctcattgatgcaggctttgctgtggaggataaggag
ttagtggcagagaaaaccagtgacacagtaaggaccagtgctcccttacgattagaagaa
aaagtagatgtattggagtggacgtgggttgagcttgccattgatgaaacggtagatgtt
gtcatctgcatgctgtataatcctggagagttttattgtcacattcttaaagaggatgtt
ttaaagaccctcagtgacttgaataaatcattagccgaatattgccagcagaagtcacct
aatggttttaaggcagaaataggacaaccttgctgtgccttttttgcaggtgatggcaac
tggtatcgtgctttaatcaaggaaatcttaccaaacggtaatgtgaaagtgcacttcgtg
gattatgggaacatcgaagaagttaccacagatgaactccggatgataccatccaagttc
ttaagacttccatttcaaggaatacagtgctggttagtagatatacagcctaagaacaaa
cactggactaaggaagccatagcaaggtttcagatgtgtgttagaggcacaaagctccag
gccagagtggtggaaatgaccgaaaagggagtgggcgttgagcttactgatctttccact
tcctaccccaaaataattagtgatattctgactagtgaacacctggttttaagatgtggc
tcaccacacacctacttgcgaaacaggagaccggctagtaaatataatcaccaaactgac
acccaggagcttcaaggtaacaccccggtctcttcagcagatcagtggaagacgatagaa
ttgccagttcacaagactgtgcaggcaaacatactagaaatcgtaaacccaaatttgttc
tacgctgtgtcgtctgagatgccagacaatcaagaaaaactgagtacattgacagctgag
ttgttagagtactgcaattctcagaaaagccggccatcttatagaccaagaattggagac
gcatgctgtgccaaatacacaagtgatgatttctggtaccgggcaattgtgttggcaaca
tcagactccgatgtgaaagtgctctatgcagactatgggaacatcgaaaccctgcctctt
tccagggtgcagccaattctcgcaagccacctggagctaccttttcaaattattaagtgt
tcacttgaaggactgacagaactgaatggaagctgttctcaattaatgatagagctacta
aaaaatttcatgttgaatcagcatgtgatgctttctgtgaaaaggatcgcgaagaatgtt
cacacggtgtctgtggagaagtgttccgagaacggcactatcaacgtagccgagaagctg
gtgatgcatgatctgacacaaaacatggcactgaagccaagtgctctcaataaagacaag
acacatgggaggaattgttgctgcacagagttacagaagcaggttgaaaaacatgagcag
attcttctcttcctcttaaacaatccaaccaacccaagtaaatttattgaaatgaaaaat
ctgctaaaaaggtaa
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