Perognathus longimembris pacificus (Pacific pocket mouse): 125346228
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Entry
125346228 CDS
T08928
Symbol
Pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125346228 (Pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125346228 (Pdlim1)
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
125346228 (Pdlim1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
125346228
NCBI-ProteinID:
XP_048194569
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All DBs
Position
2:26491972..26530533
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AA seq
329 aa
AA seq
DB search
MTTQQIVLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAAVANLCIGDIITAIDGENTSG
MTHLEAQNKIKGCTDNMTLTVTRSEQKIWSPLVTEEGKRHPYKMNLASEPQEVLHIGSAH
NRSAMPFTASPASSTAPRVITNQYNNPSGLYSSENISNFNNAVESKTAAGGGEANGRLVD
HTQASGGLTIDKESEVYKMLQEKQELNEPPKQSTSFLVLQEILESDEKGDPNKPSGFRSV
KAPVTKVAASIGNAQKLPMCDKCGTGIVGVFVKLRERHRHPECYVCTDCGTNLKQKGHFF
VEDQIYCEKHARERVTPPEGYDVVTVFPK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccagcagatcgttctccagggcccgggaccctggggcttccgcctcgtgggc
ggcaaggacttcgagcagcccctcgccatttcccgggtcactcctggaagcaaggctgct
gtagcgaatttatgtattggagacattatcacagccatcgatggggaaaataccagcggg
atgacgcatttagaagctcagaacaaaatcaagggctgcacagacaacatgacgctcaca
gtcaccagatctgaacagaaaatctggtctcctctagtgactgaggaggggaaacgtcac
ccatacaagatgaatttagcctctgaaccccaagaggtcctgcacataggaagtgcccac
aaccgaagtgccatgccctttactgcctctcctgcctccagcactgcccccagggtcatc
accaaccagtacaacaacccatctggcttgtactcgtcggagaacatctccaacttcaac
aatgctgtggagtcaaagactgcagctggtgggggagaggccaatggcagactcgtggac
cacacccaggcatccggtggcctaaccatcgacaaggaatctgaggtttacaagatgctg
caggagaagcaggagttgaatgaacccccaaagcagtccacctcgttcctggtcctgcag
gagatcttggagtcggatgaaaaaggggatcccaacaagccctcaggatttagaagtgtt
aaagctccagtcaccaaagtggctgcctcgattggaaatgctcagaagctacccatgtgt
gacaaatgcggtactggcattgttggggtgtttgtgaagcttcgagaacgtcatcgccac
cctgagtgttacgtgtgtaccgactgtggcaccaacctgaagcagaagggccatttcttt
gtagaggatcaaatctactgtgagaagcacgcccgggagcgagtcactcccccggagggc
tacgatgtggtcaccgtgtttcccaagtga
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