Perognathus longimembris pacificus (Pacific pocket mouse): 125346517
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Entry
125346517 CDS
T08928
Symbol
Sftpd
Name
(RefSeq) pulmonary surfactant-associated protein D
KO
K10068
pulmonary surfactant-associated protein D
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125346517 (Sftpd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125346517 (Sftpd)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
plop04091
]
125346517 (Sftpd)
Membrane trafficking [BR:
plop04131
]
Endocytosis
Phagocytosis
Opsonins
125346517 (Sftpd)
Lectins [BR:
plop04091
]
C-Type lectins
Collectins
125346517 (Sftpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Lectin_C
Surfac_D-trimer
FlxA
DivIC
NPV_P10
Cbl_N3
Bap31_Bap29_C
Motif
Other DBs
NCBI-GeneID:
125346517
NCBI-ProteinID:
XP_048195112
LinkDB
All DBs
Position
2:53494145..53504801
Genome browser
AA seq
374 aa
AA seq
DB search
MLLFLCMLVLFSQPWGYLGAEMKTLVRRSVTNACTLVMCGPAENGLPGRDGRDGREGPRG
EKGDPGSPGAVGLTGMPGPSGPIGPKGDNGSVGEPGPKGDSGPGGPPGLPGVPGPAGKDG
PSGKQGNIGPQGKPGPKGEAGPKGEVGAPGTQGASGARGPTGPKGERGTPGERGAPGNAG
ASGPAGAVGPQGAPGTRGPPGLKGDRGAPGDKGAKGESGLQDIAALRQQVETLQRQLQKL
QADFSHHKKAMLFPDGQSVGDKIFKTAGSVKLFQGAQELCTQAGGQLASPRSAAENKALQ
QLVTAQNKAAFLSMTDNDTEGKFTYPTGEPLVYSNWAPGEPNNNGGSENCVEIFTNGQWN
DKTCGEERLVVCEF
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcttcctttgcatgctagtcctgttctcacagccctgggggtacctgggagca
gaaatgaagaccttggtccggaggtcagtgaccaacgcctgcaccctggtcatgtgcggc
cctgcggagaatggcctacctggtcgagatggacgagacgggagagagggcccgaggggc
gagaagggagatccaggttcaccaggagctgtgggactaacagggatgcctggaccatct
ggcccaattggacccaaaggggataatggctctgttggagaaccaggaccaaagggagac
tctggaccaggtggacctcctggacttccaggtgttcctggtccagctggaaaagatggt
ccctctggaaagcaggggaacataggacctcaaggaaaaccaggcccaaagggagaggct
ggacccaaaggagaagtaggtgccccaggcactcagggtgcctcaggggcaagaggtccc
acaggacctaaaggagagagaggtacccctggtgaacgtggagcccctggaaatgctgga
gcatcaggacctgctggggctgtgggtccacagggagctccaggtaccaggggtccccca
ggactgaagggagacagaggtgctcctggagacaaaggagccaaaggtgaaagtgggctt
caagatattgctgctctgaggcagcaggtggagaccttacagagacagttacagaagctc
caggctgacttctctcaccataagaaagccatgctcttccctgatggccaaagtgtgggg
gacaagatcttcaagacagcaggctctgtgaaattattccagggtgcccaagagttgtgc
acacaggctggtggacagctggcctctccacgctctgcagctgagaataaggccctgcag
cagctggtcacagcccagaacaaggctgctttcctaagcatgacagacaatgacacagaa
ggcaaattcacctaccccaccggggagcctttagtctattccaactgggccccaggggag
cccaacaacaatggcgggtcggagaactgtgtggagatcttcaccaacggccagtggaat
gacaagacttgtggagaagagcgccttgtggtctgcgagttctga
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integrated database retrieval system
