Perognathus longimembris pacificus (Pacific pocket mouse): 125346567
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Entry
125346567 CDS
T08928
Symbol
Csgalnact2
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 2 isoform X1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
plop01100
Metabolic pathways
Module
plop_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
125346567 (Csgalnact2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
plop01003
]
125346567 (Csgalnact2)
Enzymes [BR:
plop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
125346567 (Csgalnact2)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
125346567 (Csgalnact2)
Glycosyltransferases [BR:
plop01003
]
Glycan extension
O-Glycan
125346567 (Csgalnact2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
Mei4
Metal_resist
KfrA_N
SlyX
CLZ
DUF3573
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
125346567
NCBI-ProteinID:
XP_048195202
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All DBs
Position
2:61139411..61194850
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AA seq
541 aa
AA seq
DB search
MSRRASVLHTRTHWLLLGLALLCSLVFMYLLQCAPQTDGNAPLPGFVGDNHGKEYYQALL
QEQEEHYQTRATSLKRQIAQLKQELQEMNDKMRSLQEKKSSGANGLGYQVSKDQAPGDLL
EFLHSQINKAEVSIGAKLPSEYGVIPFESFTLTKVFQLEMGLTRHPEEKPVRKDKRDELV
EVIEAGLEVINNPDEDDEQEDEEGPLGEKLMFSENDFVEGYYRTEKDKGTQYELFFKKAD
LMEYRHVTLFRPFGPLMKVKSEMIDIARSIINIIVPLAGRTEAFAQFMQNFRDVCIHQDK
RIHLTVVYFGKEGLSQVKSILESVTSESNFHNYTLVSLNEEFNRGRGLNVGARAWDKGEV
LMFFCDVDIYFSAEFLNSCRLNSEPGKKVFYPVVFSLYNPAIVYANQDIPPPVEQQLVHK
KDSGFWRDFGFGMTCQYRSDFLTIGGFDMEVKGWGGEDVHLYRKYLHGDLIVLRTPVPGL
FHLWHEKHCADELAPEQYRMCIQSKAMNEASHSLLGMMVFREEIERHLHKQAYRTNSEAF
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaagagcatcagttcttcacacccggacccactggcttctgctgggcctcgct
ttgctctgcagtttggtatttatgtacctcctccagtgtgcaccccaaactgatggaaat
gctcctcttccgggttttgttggggacaatcatggcaaagagtattatcaagctctcctc
caggagcaagaggaacattaccagaccagggccaccagcctgaaacgccagattgcccag
ctaaaacaagaattacaagaaatgaatgataaaatgagatcattgcaagagaaaaagagt
tcaggagctaatggcttaggctatcaagtcagcaaagaccaagcacctggcgatctttta
gagtttcttcattcccagattaacaaagctgaagttagcataggagccaaactgcccagt
gagtatggagtcataccctttgaaagttttaccttaacaaaagtatttcagttggaaatg
gggctcactcgccatcctgaagaaaaaccagttagaaaagacaagcgagatgaattggta
gaagttattgaagctggcttggaggtcattaataatcctgatgaagatgatgaacaggaa
gatgaggaaggcccccttggagagaaactgatgttcagtgaaaatgacttcgtagaaggt
tattatcgcaccgaaaaagataagggcacacagtatgaactattttttaagaaagcagac
cttatggaatacagacatgtgaccctcttccgcccttttggacctctcatgaaagtgaag
agtgaaatgattgacattgctagatcaatcattaacatcattgtacctcttgctggaaga
actgaagcatttgcacagtttatgcagaacttcagggatgtttgtattcatcaagacaag
aggattcatctcacagtggtgtattttggtaaagaaggactgtcacaagtcaagtctatc
ctagaatctgtcacaagtgagtctaattttcacaattacaccttggtctcattgaatgaa
gaatttaatcgtggacgaggactaaatgtgggtgccagagcttgggacaagggagaggtc
ttgatgtttttctgtgatgttgatatatatttctcagccgaattccttaacagctgccgc
ttaaattctgagccaggtaaaaaggtgttctatcctgtggtgttcagtctttataatcct
gccatcgtttatgccaaccaggatataccacctcccgtggagcagcagctggttcacaaa
aaggattctgggttttggcgagattttggatttggaatgacttgtcagtatcgatcggac
ttcctgaccattggtggatttgacatggaagtgaaaggctggggtggggaagatgttcat
ctgtatcgaaaatacctacatggtgacctcatcgtgctgcggactcctgtgcctggcctc
ttccacttgtggcatgagaaacactgtgcagatgagctggcccctgagcagtaccgtatg
tgcatccagtccaaggccatgaatgaggcctcccactctctactggggatgatggtattc
agggaggagatcgagcggcaccttcacaaacaggcctatcggaccaatagtgaggccttt
gcgtga
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