Perognathus longimembris pacificus (Pacific pocket mouse): 125346731
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Entry
125346731 CDS
T08928
Symbol
Nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04621
NOD-like receptor signaling pathway
plop05132
Salmonella infection
plop05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125346731 (Nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125346731 (Nod1)
05133 Pertussis
125346731 (Nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
plop04054
]
125346731 (Nod1)
Pattern recognition receptors [BR:
plop04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125346731 (Nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_6
LRR_4
NOD2_WH
AAA_16
AAA_22
AAA_30
AAA_29
AAA_25
ABC_tran
Motif
Other DBs
NCBI-GeneID:
125346731
NCBI-ProteinID:
XP_048195486
LinkDB
All DBs
Position
2:75818988..75869823
Genome browser
AA seq
972 aa
AA seq
DB search
MEEQDVNTSHSHSYIKLLKTNRELLVTHIHNTQCLLDNLLENGYFLAEDVEIVCACPTQP
GKVQEQVRNLLDLVQSKGEEVSEFFLYVLQQLTDAYVDLQPWLLEIGFSASQLIQSKTII
NTDPVSRYTQQLRHLGGCDSRFLPSYAQDCERELPLEEVYEDPVLELLGPDDESMGPLSG
PAWLLDPEPRVLGGQGEAVLVVGDAGAGKSALLQRLQALWAAGRLGVELRFFFLFRCRAL
GGMGAALRLQDLLFRHCCFPEHGTEEIFAFLLRFPHLALLAFDGLDELPADFDPSRAPDS
CSPWEPAPPMALLAALLRGRLLAGTRKLLTARTGTQLPRALLRAKVRLRGFGPLQLHNYA
RRVVPGRAARERLLQQLDAHPGLGGLCAVPLFCGLVFRCCAGLCDALEGPGRVLTLTDVF
LRVTEVHLRRAQPRSLVQLPARSSAETLRAGWHALRALGRVALCGTQRGRFVFGPDEVRA
SELREGGAPLLPLGFLRALPALGPEPGHQAFEFLHLTLQAFFAAFFLVVDDGVGTRELLR
FLGTGAGAGDGDTDGDRDGDLDTVVSSCHPCLPARCLRDCRPTGPEPSSSKDHLQFTNLF
LCGLLAKARQRLLQTLVPVAALRRKRRALCTHLLARLRAHLRGLPRLRHGGFRQVQAMPT
FLWMLRCLYETQSHKVGWRAARGLRANYLKLAFCNACPADCSSLAFVLRHLPTRLALDLD
NNNLNDFGVRELQPCFSHLTVLRLSVNHITDTGVKVLSEELTKYKIVTYLGLYNNQITDI
GARYVARILDECGSLTHLKLNAHDSPPLYRLGKNKITSEGGKCLALAMKNSTSICDIGMW
GNQIGDEGAAAFAEALRDHPSLNNLSLAFNGISTEGGKSLAQALKQNTSLEIFWLTQNEL
NDEVAESFAEMLKVNQKLKHLWLIQNQITAKGTALLAEALQKNSSLTELCLNGNLIKPEE
AKVFEDEKRLFF
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcaggatgtcaacacatcacattctcactcgtacattaaactactgaagacc
aaccgggagctgctggtcacccacatccacaacacacagtgtctgctggacaacctgctg
gagaatggctatttcttggctgaagacgtggagattgtgtgtgcctgccccactcagcct
ggcaaggtgcaggaacaggttcgaaaccttctggacctggtacagagcaagggcgaggag
gtgtctgagttcttcctctatgtgctccagcaactcacagatgcatacgtggacctccag
ccatggctgctggagatcggcttctccgcttcccagctcattcagagcaaaactattatc
aacactgacccagtgagcaggtacacccagcagctgcggcacctggggggctgcgactcc
aggtttctgccgagctacgcgcaggactgcgagcgcgagctgccgctggaggaggtctac
gaggacccggtcctggagctgctgggccccgacgatgagagcatgggtcccctgagcggc
ccagcctggctgctggatcctgagccccgcgtcctcggcgggcagggcgaggcggtgctg
gtggtgggcgacgcgggcgcgggcaagtcggcactgctgcagcggctgcaggctctgtgg
gcggcggggcgtctgggcgtcgagctccgcttcttcttcctcttccgctgccgggcgctg
ggtgggatgggcgccgcgctgcggctgcaggacctacttttccgccactgctgcttccct
gagcacggcaccgaggagatcttcgccttcctgctgcgcttcccgcacttggcgctgctg
gccttcgacggcctggacgagctgcccgccgacttcgacccgagccgcgctcccgacagc
tgcagcccctgggagcccgcgccaccgatggcactgctggcggcgctgttgcgtggcagg
ctgctggcgggcacgcgcaagctgctgaccgcgcgcacgggcacccagctcccgcgcgcg
ctcctgcgcgccaaggtgcggctgcgcggcttcggtccgctccagttgcacaattacgcg
cgtcgtgtggtgccgggccgcgccgcgcgcgagcgcctgctgcaacagctggacgcccat
cctggcctgggcggcctctgcgctgtgccgctcttctgcggcctcgtcttccgctgctgc
gcaggcctttgcgacgccctggagggccctggccgcgtgctgactctcaccgacgtcttc
ctgcgagtcaccgaggtccacctgcgtcgggcacagccgcgcagcttggtgcagctcccg
gcgcgtagctcggccgaaaccctgcgtgcagggtggcatgcactgcgggcgctggggcgt
gtggcgctgtgcggcacccagcgcggccgcttcgtcttcggccctgacgaggtgcgggca
tcggagctgcgggagggtggtgcgccgctcctgccgctgggctttcttcgggccctgcct
gcgctggggcccgagcctggacaccaggccttcgagtttctgcacctgacactccaggcc
ttcttcgctgccttcttcctggtggtggacgatggggtgggaactcgggagctgctgcgg
ttcttagggacaggggccggggctggggatggagatacggacggggatagggatggggac
ttggacactgttgtcagctcctgccacccttgtctccccgcccggtgcctgcgcgactgc
cgccccaccggccccgagccctcctccagcaaggaccacctccagttcaccaatctcttc
ctgtgcggacttctggccaaggccaggcagaggcttctgcagaccctggtgcccgtggct
gccctaaggaggaagcgcagggccctgtgcacccacctgctcgcccgcctgcgtgcgcac
ctgcgaggcttgccacggctccggcacggtggcttccggcaggtgcaggccatgcccacc
ttcctctggatgctgcgctgcctctatgagacacagagtcataaggtcgggtggcgcgca
gcacgcggactccgagccaactacctcaaactggccttctgcaatgcctgcccagccgac
tgcagctccctggccttcgtcctgcgccacctgcccactcgcctggccctggacctggac
aacaacaacctcaacgacttcggtgttcgtgagctgcagccgtgcttcagccacctcact
gtcctcagactcagtgtcaaccatatcactgatactggggtgaaggtgctgagtgaagag
ctgaccaagtacaagattgtgacatatttgggtttgtacaacaaccagatcactgacatt
ggcgccaggtatgttgctcgaatcctggatgaatgcggaagcctcacacacctaaagtta
aatgcacatgactctccacctctctacagactgggcaaaaacaaaataacaagtgaaggt
ggaaagtgcctggccctggctatgaagaacagcacatcgatctgtgacattgggatgtgg
ggcaatcaaattggggatgaaggagctgcagcctttgcagaggctctgagggaccacccc
agtctgaacaacctgagtcttgcattcaacggcatctccacagaaggagggaagagcctg
gctcaggccttgaagcagaacacttctctggagatattttggctgacccaaaatgaactc
aatgatgaagtggcggagagctttgcagaaatgttgaaggtgaaccagaagttgaagcat
ttatggctcattcagaatcagatcacagctaaggggactgcactgctggcagaggccctg
cagaagaacagcagtctcacagagctttgtctaaatggaaacttgataaaaccagaagag
gccaaagtgtttgaagatgagaagcggctcttcttctga
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