Perognathus longimembris pacificus (Pacific pocket mouse): 125346732
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Entry
125346732 CDS
T08928
Symbol
Gars1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125346732 (Gars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
plop01007
]
125346732 (Gars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plop03016
]
125346732 (Gars1)
03029 Mitochondrial biogenesis [BR:
plop03029
]
125346732 (Gars1)
Enzymes [BR:
plop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
125346732 (Gars1)
Amino acid related enzymes [BR:
plop01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
125346732 (Gars1)
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125346732 (Gars1)
Mitochondrial biogenesis [BR:
plop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
125346732 (Gars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
DUF5915
Motif
Other DBs
NCBI-GeneID:
125346732
NCBI-ProteinID:
XP_048195494
LinkDB
All DBs
Position
2:complement(75740722..75786678)
Genome browser
AA seq
739 aa
AA seq
DB search
MPSPRPALLKAVRAVLLPPLPRPPVRNPLAPRRPLSARAPASFPAAAVAAFASQSTMDGA
EEVLAPLRLAVRQQGDLVRKLKEDKAPQVDIDKAVAELKARKRVLEAKELALQPKDDIVD
RSKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDC
TMLTPEPVLKTSGHVDKFADFMVKDMKSGECFRADHLLKAHLQKLMSDKKCSAEKKSEME
SVLAQLDNYGQQELGDLFVNYNVKSPTTGNDLSPPVPFNLMFKTFIGPGGNMPGYLRPET
AQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEK
DHSKFQNVADFHLYLYSAKAQVSGQSAHKMRLGDAVEQGVINNSVLGYFIGRIYLYLTKV
GVSPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHAKATKVPL
VAEKPLKEPKTVNVVQFEPNKGAVGKAYKKDAKLVMEYLAACDECYITEMETLLNEKGEF
TVETEGKTFHLTKDMVSVKRFQKTLYVEEVVPSVIEPSFGLGRIMYTVLEHTFHVREGDE
QRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTKNGVSHKVDDSSGSIGRRYAR
TDEIGVAFGITIDFDTVNKTPHTATLRDRDSMKQIRAEVSELPSVVRDLANGNITWADVE
AKYPLFEGQETGKKETIEE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccctccccgcgcccggcgctgcttaaggccgtccgcgcggtgctgctgccgccgctg
ccccggcctcctgtccgcaacccgctcgcgccccggcggcccctcagcgcccgcgccccg
gcctccttccccgccgctgccgtcgccgccttcgcctcccagagcaccatggacggcgcc
gaggaggtgctggctcctctcaggctagccgtgcgccagcagggagatcttgtacggaag
ctgaaagaagataaagcaccccaagtggatatagacaaagcagtggccgagctcaaagcc
cgaaagcgtgttctggaagcaaaggagctggcattgcagcccaaagatgacattgtagac
agatcaaaaatggaagacaccttgaagagaagatttttctacgatcaagcttttgctatt
tatggaggtgttagtggattgtatgactttgggccagttggatgtgccttgaagaacaac
attattcagacctggaggcagcactttatccaggaggagcagatcctggagattgactgt
accatgctcaccccggagcccgtccttaagacctctggccatgtggacaaatttgctgac
ttcatggtgaaggatatgaagagtggcgagtgcttccgggctgaccatctgctgaaagct
catttacagaaactgatgtctgacaagaagtgttctgctgagaagaagtcagagatggaa
agtgtcttggcccagctcgacaactatggacaacaagaacttggggatctttttgtgaac
tataatgtaaaatctcccactaccggaaatgatctgtctcctccagtaccttttaactta
atgttcaagaccttcattgggcctggaggaaacatgcctggatatttgagaccagaaact
gcacagggaattttcctgaatttcaaacgacttttggaattcaaccagggaaagttacct
tttgctgctgcccagattggaaattcctttagaaatgaaatctctcctcggtctggactg
atccgagtcagagaattcacaatggccgagattgagcactttgttgatcccagtgagaaa
gaccattccaagtttcagaatgtagctgacttccacctgtatttatattcagcaaaagcc
caggtcagcggacagtctgctcataaaatgcgcctgggggatgctgttgaacagggtgtg
atcaacaactcagtactgggctatttcattggccgcatctacctctacctcacgaaggtt
ggcgtgtctccagataagctccgcttccgacagcacatggagaatgagatggcccactat
gcttgcgactgctgggatgcagagtccaaaacctcctacggctggattgagattgttgga
tgtgctgatcgttcctgttatgacctctcctgtcatgcaaaagccacaaaagtgccccta
gtggctgagaaaccacttaaagaacccaaaacagttaatgttgttcagtttgaacccaat
aagggagcagttggcaaggcatataagaaggatgcaaagctggtgatggagtacctcgct
gcctgtgatgaatgttacattacagaaatggagacactgctgaatgaaaaaggggaattc
actgttgaaactgaagggaaaacatttcatttaacaaaagacatggtcagtgtgaagaga
ttccagaaaacactatatgtggaagaagttgtcccaagtgtcatcgagccctcctttggc
ctgggcaggatcatgtacaccgtgcttgaacatacattccacgtccgagagggggatgaa
cagagaacgttcttcagtttccctgctgtggtggcgccattcaagtgttctgttcttcca
ctgagccagaaccaggagttcatgccatttgtcaaggaattgtcggaagctttgaccaag
aatggcgtttctcataaagtggatgattcctctgggtccattgggaggcgctatgccagg
actgatgagattggcgtggctttcggcatcaccattgacttcgacacagtgaacaaaacc
cctcacacagcaactctgagggaccgagactccatgaagcagatcagggcagaggtgtct
gagctgcccagtgtggtccgagatctggctaatggcaacatcacgtgggcagacgtggag
gccaagtaccctctcttcgaagggcaagagactggcaagaaagaaacaattgaggaatga
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