Perognathus longimembris pacificus (Pacific pocket mouse): 125346732
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Entry
125346732 CDS
T08928
Symbol
Gars1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125346732 (Gars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
plop01007
]
125346732 (Gars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plop03016
]
125346732 (Gars1)
03029 Mitochondrial biogenesis [BR:
plop03029
]
125346732 (Gars1)
Enzymes [BR:
plop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
125346732 (Gars1)
Amino acid related enzymes [BR:
plop01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
125346732 (Gars1)
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125346732 (Gars1)
Mitochondrial biogenesis [BR:
plop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
125346732 (Gars1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
125346732
NCBI-ProteinID:
XP_048195494
LinkDB
All DBs
Position
2:complement(75740722..75786678)
Genome browser
AA seq
739 aa
AA seq
DB search
MPSPRPALLKAVRAVLLPPLPRPPVRNPLAPRRPLSARAPASFPAAAVAAFASQSTMDGA
EEVLAPLRLAVRQQGDLVRKLKEDKAPQVDIDKAVAELKARKRVLEAKELALQPKDDIVD
RSKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDC
TMLTPEPVLKTSGHVDKFADFMVKDMKSGECFRADHLLKAHLQKLMSDKKCSAEKKSEME
SVLAQLDNYGQQELGDLFVNYNVKSPTTGNDLSPPVPFNLMFKTFIGPGGNMPGYLRPET
AQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEK
DHSKFQNVADFHLYLYSAKAQVSGQSAHKMRLGDAVEQGVINNSVLGYFIGRIYLYLTKV
GVSPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHAKATKVPL
VAEKPLKEPKTVNVVQFEPNKGAVGKAYKKDAKLVMEYLAACDECYITEMETLLNEKGEF
TVETEGKTFHLTKDMVSVKRFQKTLYVEEVVPSVIEPSFGLGRIMYTVLEHTFHVREGDE
QRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTKNGVSHKVDDSSGSIGRRYAR
TDEIGVAFGITIDFDTVNKTPHTATLRDRDSMKQIRAEVSELPSVVRDLANGNITWADVE
AKYPLFEGQETGKKETIEE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccctccccgcgcccggcgctgcttaaggccgtccgcgcggtgctgctgccgccgctg
ccccggcctcctgtccgcaacccgctcgcgccccggcggcccctcagcgcccgcgccccg
gcctccttccccgccgctgccgtcgccgccttcgcctcccagagcaccatggacggcgcc
gaggaggtgctggctcctctcaggctagccgtgcgccagcagggagatcttgtacggaag
ctgaaagaagataaagcaccccaagtggatatagacaaagcagtggccgagctcaaagcc
cgaaagcgtgttctggaagcaaaggagctggcattgcagcccaaagatgacattgtagac
agatcaaaaatggaagacaccttgaagagaagatttttctacgatcaagcttttgctatt
tatggaggtgttagtggattgtatgactttgggccagttggatgtgccttgaagaacaac
attattcagacctggaggcagcactttatccaggaggagcagatcctggagattgactgt
accatgctcaccccggagcccgtccttaagacctctggccatgtggacaaatttgctgac
ttcatggtgaaggatatgaagagtggcgagtgcttccgggctgaccatctgctgaaagct
catttacagaaactgatgtctgacaagaagtgttctgctgagaagaagtcagagatggaa
agtgtcttggcccagctcgacaactatggacaacaagaacttggggatctttttgtgaac
tataatgtaaaatctcccactaccggaaatgatctgtctcctccagtaccttttaactta
atgttcaagaccttcattgggcctggaggaaacatgcctggatatttgagaccagaaact
gcacagggaattttcctgaatttcaaacgacttttggaattcaaccagggaaagttacct
tttgctgctgcccagattggaaattcctttagaaatgaaatctctcctcggtctggactg
atccgagtcagagaattcacaatggccgagattgagcactttgttgatcccagtgagaaa
gaccattccaagtttcagaatgtagctgacttccacctgtatttatattcagcaaaagcc
caggtcagcggacagtctgctcataaaatgcgcctgggggatgctgttgaacagggtgtg
atcaacaactcagtactgggctatttcattggccgcatctacctctacctcacgaaggtt
ggcgtgtctccagataagctccgcttccgacagcacatggagaatgagatggcccactat
gcttgcgactgctgggatgcagagtccaaaacctcctacggctggattgagattgttgga
tgtgctgatcgttcctgttatgacctctcctgtcatgcaaaagccacaaaagtgccccta
gtggctgagaaaccacttaaagaacccaaaacagttaatgttgttcagtttgaacccaat
aagggagcagttggcaaggcatataagaaggatgcaaagctggtgatggagtacctcgct
gcctgtgatgaatgttacattacagaaatggagacactgctgaatgaaaaaggggaattc
actgttgaaactgaagggaaaacatttcatttaacaaaagacatggtcagtgtgaagaga
ttccagaaaacactatatgtggaagaagttgtcccaagtgtcatcgagccctcctttggc
ctgggcaggatcatgtacaccgtgcttgaacatacattccacgtccgagagggggatgaa
cagagaacgttcttcagtttccctgctgtggtggcgccattcaagtgttctgttcttcca
ctgagccagaaccaggagttcatgccatttgtcaaggaattgtcggaagctttgaccaag
aatggcgtttctcataaagtggatgattcctctgggtccattgggaggcgctatgccagg
actgatgagattggcgtggctttcggcatcaccattgacttcgacacagtgaacaaaacc
cctcacacagcaactctgagggaccgagactccatgaagcagatcagggcagaggtgtct
gagctgcccagtgtggtccgagatctggctaatggcaacatcacgtgggcagacgtggag
gccaagtaccctctcttcgaagggcaagagactggcaagaaagaaacaattgaggaatga
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