Perognathus longimembris pacificus (Pacific pocket mouse): 125346842
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Entry
125346842 CDS
T08928
Symbol
Hdac9
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04613
Neutrophil extracellular trap formation
plop05034
Alcoholism
plop05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
125346842 (Hdac9)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
125346842 (Hdac9)
09165 Substance dependence
05034 Alcoholism
125346842 (Hdac9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125346842 (Hdac9)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
125346842 (Hdac9)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
125346842 (Hdac9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
125346842
NCBI-ProteinID:
XP_048195684
LinkDB
All DBs
Position
2:complement(91901097..92706611)
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AA seq
637 aa
AA seq
DB search
MSSPVQPDGVAAREQLLAQQRMHSRINSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDP
VVREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQ
QELLEKEQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSA
TKDTPTNGKNHSVSRHPKLWAAHHTSLDQSSPPLSGTSPSYKYTLPGAHDAKDDFPLRKT
ASEPNLKVRSRLKQKVAERRSSPLLRRKDGNVTSFKKRMFEVTESSVSSSSPGSGPSSPN
NGPTGNVTENETPVLPPTPHAEQLVSQQRILLHEDSMNLLSLYTSPSLPNITLGLPAVPS
PLSASNSLKEKQKCETQTLRQGVPLPGQYGGSIPASSSHAHVALEGKPNSSHQALLQHLL
LKEQMRQQKLLVAGGVPLHPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLA
QLVIQQQHQQFLEKQKQYQQQIHMNKPARQQPDFAGGSPPDVQPKRDPATPLRLLSKSIE
QLKQPGSHLEEAEEELQVDQAMQEDRAPSSDPSTRSESSTCVEDTLGQVGAVKVKEEPVD
SDEDTQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaccagtgcagcccgatggggtggctgcgcgggagcaactcttggctcagcaa
agaatgcacagtaggatcaactcagtggatgtgaagtcagaagtccctgtgggcctggag
cccatctcacctttagacctaaggacagacctcaggatgatgatgcctgtggtggaccct
gtcgtccgggagaaacaactgcagcaggaattacttcttattcagcaacagcagcaaatc
cagaagcagcttctgatcgcagagttccagaaacagcatgagaacttgacacgacagcat
caggctcagcttcaggagcacataaagttgcaacaggaacttctagccataaaacagcag
caagaactcctagaaaaggaacagaaactggagcagcagaggcaagaacaggaagtagag
aggcatcgcagagaacagcagcttcctcccctcagaggcaaagatagaggacgagaaaga
gctgtggcaagcacagaagtaaagcagaagcttcaagaattcctattgagtaaatcagca
acgaaagacactccaactaatggaaaaaatcattccgtgagccgccaccccaagctctgg
gctgcccaccacacatctttggatcaaagctctccacccctcagtggcacctctccatcc
tacaaatacaccttaccaggagcacacgatgccaaggatgatttcccactccgaaaaact
gcctctgagcccaacttgaaggtgcggtccaggttaaaacagaaagtggcagagaggaga
agcagccctttactcaggcggaaggatggaaatgtcacttcattcaagaagcgaatgttt
gaggtgacagaatcctcagtcagtagcagttctcccgggtcaggtcccagttcaccaaac
aatgggccaactggaaatgttactgagaatgaaactccagttttgccccccactcctcat
gcggagcaacttgtttcacagcaacgcatcttactccatgaagattccatgaacctgcta
agtctttatacctctccttctttacccaatatcaccttgggacttcctgcagtgccatca
ccactcagtgcttcaaattcacttaaagaaaagcagaagtgtgaaacccagacgctcagg
caaggtgttcctcttcctggccagtatgggggcagcatcccagcctcttcaagtcatgct
catgtcgccctggaggggaagcccaacagcagccaccaagctctcctgcagcatttatta
ctgaaagaacaaatgcgacaacaaaagcttcttgtggctggtggagtacccttacatcct
cagtctccattggcgacaaaagagagaatttcacctggtattcgaggtacccacaaattg
ccccgtcacagacctctgaatagaacccagtctgcacctttgcctcagagtacattggct
cagctggtcattcagcagcaacaccagcaattcttggagaagcagaaacaataccagcaa
cagatccacatgaacaaaccagcaaggcaacagcccgactttgctgggggatcacctcca
gatgttcaaccaaagagagaccctgccaccccactgagactgctttcgaaatctattgaa
caactgaagcaaccaggcagtcaccttgaggaagcagaggaggagctgcaggtcgaccag
gcgatgcaggaagacagagcgccctctagtgaccccagtactaggagcgaaagcagtact
tgtgtggaggatacactgggacaagttggggctgtcaaagtcaaagaggaaccagtggac
agtgatgaagacactcagatccaggaaatggaatctggggagcaggctgcttttatgcaa
caggtaataggcaaagatttagctccaggatttgtaattaaagtcattatctga
DBGET
integrated database retrieval system
