Perognathus longimembris pacificus (Pacific pocket mouse): 125346843
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Entry
125346843 CDS
T08928
Symbol
Snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125346843 (Snx13)
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
125346843 (Snx13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
COX5A
Motif
Other DBs
NCBI-GeneID:
125346843
NCBI-ProteinID:
XP_048195691
LinkDB
All DBs
Position
2:92922318..93041471
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AA seq
968 aa
AA seq
DB search
MSTETNLSILGWGSLGIVLFLITFGPFVIFYLAFYILCFVGGGLVVTLLFGKTNSEKYLE
QCEHSFLPPTSTGVPKCLEEMKREARTIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWY
YTLSDDESFLLEIRQTLQNALIQFATRSKEIDWQPYFTTRIVDDFGTHLRVFRKAQQKVT
EKDDQVKGTAEDLVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYLLLPPGD
FQNKIMRYFVREILARGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDNI
GELEAVRDKAAEELQYLRSLDTAGDDINTIKNQINSLLFVKKVCDSRIQRLQSGKEINTV
KLAANFGKLCTVPLDSILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVL
SSRQRDGKHQTNQTKGLLRAAAVGIYEQYLSEKASPRVTVDDYLVAKLADTLNHEDPTPE
IFDDIQRKVYELMLRDERFYPSFRQNALYVRMLAELDMLKDPSFRGSDDGDGESFNGSPT
GSINLSLDDLSNVSSDDSVQLHAYISDTVYADYDPYAVAGVCNDHGKTYALYAITVHRRT
LNTEEMWKTYRRYSDFHDFHMRITEQFENLSSILKLPGKRTFNNMDRDFLEKRKKDLNAY
LQLLLTPEMMKASPPLAHCVCDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKS
LPDSLAEGMTKMSDNMGKMSERLGQDIKQSFFKVPPLITKADSDPEHCRVSAQLDDNVDD
NIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQ
VADSVKRFRDAFWPNGILAETVPCRDKAIRMRTRIAGKTKLFAIMPDELKHIIGAETTRK
GILRVFEMFQHNQLNRRMVYVFLEGFLETLFPQYKFRELFNKLHSRSKQMQKYKQKLQTT
QAPSLQKR
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggagaccaatctatccatattgggatggggaagccttggcattgtccttttt
ctgataacttttggaccctttgtaatattttatttggcattttatatcctctgctttgtg
ggtgggggcttagtggttactcttctgtttggaaaaacaaattcagaaaaatacctagag
cagtgtgaacattcatttcttcctcctacatcaactggggttcctaagtgcttagaagaa
atgaaacgcgaagctaggactattaagattgatagaagattaacaggtgccaatataatt
gatgaacctctccagcaagttatccagttttccttgagggattatgtccagtattggtat
tatacactaagtgatgatgaatcttttcttcttgaaattaggcagactcttcaaaatgcc
cttattcagtttgctactaggtcaaaagaaatagattggcaaccttattttaccacacgc
attgtagatgattttggaacacacctgcgagtattcagaaaggctcaacagaaagtaaca
gagaaagatgatcaagttaaaggtacagctgaagatcttgtagatactttctttgaagtt
gaagttgaaatggagaaggaagtttgccgtgacctagtgtgcacttctcccaaagatgaa
gaaggattcctaagggatttgtgtgaggtcttattatatttactgctacctcctggagat
ttccagaacaagatcatgcgctactttgtcagggaaatccttgcacgaggaattcttctt
ccattaataaatcaactcagtgatcctgattatattaatcaatatgttatatggatgatt
cgtgattctaattgcaactatgaggcctttatgaacattattaaattgagtgacaatatt
ggagagctggaagcagtcagagataaggcagcagaagaattacagtatcttagatcttta
gatacagctggtgatgatatcaatactatcaaaaatcagataaatagtttattatttgta
aagaaggtatgtgactcaaggatacagaggttgcagtcaggaaaagaaataaatactgtg
aaactggcagcaaactttgggaagctttgcacagtccccttggacagcattcttgtagac
aatgttgcactacaattttttatggattacatgcagcagactggaggtcaagcacatctt
ttcttctggatgaccgtggaagggtaccgagttacagcccagcagcagctagaggttttg
tcaagtcgtcaaagagatggaaaacatcaaaccaatcaaaccaaaggtctcttaagagca
gctgcagttggaatttatgaacagtacttatcggaaaaggcatctccaagagttactgtt
gatgactatttggtagcaaaattagcagatactttgaatcatgaagatccaactcctgaa
atctttgatgacattcaaaggaaggtatatgaattgatgctgcgagatgaaagattttat
ccttccttcagacagaatgcactctatgttcgtatgttagcggagctggacatgttgaaa
gatccaagcttcagaggatcagatgatggggatggagaatcttttaatggctctcctaca
ggaagcataaatttgtctttagatgacctttcaaatgtgtcttctgatgactcagtacaa
cttcatgcttacatttcagacactgtatatgctgactatgacccatatgctgtggcaggc
gtttgtaatgatcatggcaagacatatgccttgtacgccatcaccgtacaccggcgcact
ctgaacactgaggagatgtggaaaacttaccggagatacagtgacttccatgatttccac
atgagaatcactgaacagtttgaaaatctgtcaagcatattgaagcttcctggtaaaagg
acttttaataacatggatagagattttttggaaaaacggaaaaaggatctaaatgcatat
ttacagttgctgttaacacctgaaatgatgaaagcatccccacctttggctcactgtgta
tgtgattttcttgagaacaaagcctatagtaaggggaaaggagactttgctcgaaagatg
gacacatttgtaaatcctcttcgaaattctatgaggaatgtttcaaatgcagttaaatcc
cttcctgacagtttggcagaaggaatgactaaaatgtcagacaacatgggaaaaatgtcc
gaaagattaggtcaagacataaaacaatcattcttcaaggtgcctcctttaattacaaag
gctgattcagatcctgaacattgtcgagtatcagctcaacttgatgataatgtggatgac
aatattccacttagggtcatgctgcttctaatggatgaagtatttgacttaaaagagaga
aatcagtggttgcgaagaaatatcaaaaacctacttcaacagctgattagagccacatat
ggtgatactattaatagaaaaatagttgaccatgttgattggatgacttcaccagaacaa
gtagccgattcagtgaaacgtttcagagatgcattttggccaaatggcattttagcagag
actgttccatgcagggataaagctattcgaatgagaacaagaattgcaggaaaaactaaa
ttattcgccatcatgccagatgaactgaagcacattattggagctgagacaacacggaaa
ggtattcttcgtgtttttgaaatgtttcagcacaatcaattaaataggagaatggtttat
gtcttcttggaaggctttttagaaaccttatttccacagtataaatttcgtgaacttttc
aacaaactgcattcacggtcaaagcagatgcaaaaatacaaacagaaacttcaaactact
caagcgccttctttacagaaaaggtga
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