Perognathus longimembris pacificus (Pacific pocket mouse): 125346878
Help
Entry
125346878 CDS
T08928
Symbol
Lamb4
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04151
PI3K-Akt signaling pathway
plop04510
Focal adhesion
plop04512
ECM-receptor interaction
plop04518
Integrin signaling
plop05145
Toxoplasmosis
plop05146
Amoebiasis
plop05165
Human papillomavirus infection
plop05200
Pathways in cancer
plop05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125346878 (Lamb4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125346878 (Lamb4)
04518 Integrin signaling
125346878 (Lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125346878 (Lamb4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125346878 (Lamb4)
09162 Cancer: specific types
05222 Small cell lung cancer
125346878 (Lamb4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
125346878 (Lamb4)
09174 Infectious disease: parasitic
05146 Amoebiasis
125346878 (Lamb4)
05145 Toxoplasmosis
125346878 (Lamb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMININ_IV_B
LAMB4
LAMB1
Motif
Other DBs
NCBI-GeneID:
125346878
NCBI-ProteinID:
XP_048195747
LinkDB
All DBs
Position
2:100660102..100750388
Genome browser
AA seq
1765 aa
AA seq
DB search
MQFQLTFFLHLGWLSGWKAEDECGRGACYPSPGNLLVGRSAQLTASSTCGLKGFQKYCIL
SYLEEEQKCFICDSRLPYNPHTQPNSHTIENVISSFESHREKTWWQSENGLDHVSIRLDL
ETLFQFSHLILTFKTFRPAAMLVERSTDYGHTWKVLKYFAKDCAISFPGITAGQAQKVGD
LVCDSRYSDIEPSTGGEVVLKVLDPSFEIENPYSSHIQDLVTLTNLRINFTKLHTLGDTL
LGRKQNDSLDKYYYALYEMIVQGSCFCNGHASECGPLQKVRGDVFSPTAVVHGHCVCQHN
TDGPNCERCKDFFQDAPWRPAVGLQDSACRSCRCNGHSDRCHFDMGVYLASGGLSGGVCE
DCQHHTEGQHCDRCRPLFYRDPIKAISDPYACLPCECDPDGTLSGGICVSHSDPALGSVV
GQCLCKDNVEGAKCDQCKPNHFGLRASDPLGCRPCSCHPLGSLPFSTCDTDTGQCFCQAY
ATGPRCEECTVGFWGLGDHLHGCASCDCAIGGAYSNKCSAKDGQCDCHPHITGRRCTEPA
PGYFFAPLNFYVYEAEEATPLQGLAPLXIYIPPMTFGQVSSVHMVFRELEAGSPVTWTGP
GFARVLPGAGLRFSVNNIPLPMGFTIVVRYETQAEADWTVQIVVNPPAVSGHCTHKTPQS
TPVALALPATSRIALLPTPICLEPDVQYSIDLYFSQPWKGESHTHSYILVDSLGLVPHNT
SLEDFCSKLDLEEYWIQGCAEMASEVGPRVLPEACEKLMVSMSAQIHNGAVACKCHPQGA
VGINCSRLGGQCQCKPHVAGRRCDTCSAGSYSLGHHGCHPCHCHPEGSKSTVCDQVTGQC
ACHGGVTGRHCDRCLEGYFGFPSCHLCSCHGFAELCDPDTGSCFNCAGFTTGRHCERCID
GYYGNPSSGQSCRPCLCPDGPSSDQYFAQSCSQSPWSSDIICHCLQGYSGIQCRQCAPGF
YGNPRVSGEPCKPCACNNNIDVTDPESCSRVTGECLRCLHNTRGPHCQLCQQGHFGSALN
QTCKRCSCHPSGVNPTACPPGGEACRCDPVTGVCPCLPHVTGLACDHCVDGYWNLVPGRG
CQPCDCDPQGSQSSHCDQLTGQCPCKRGHGGKRCSECKENYYRDPFKRCIPCECNSEGTR
KPLCDPDTGMCLCREGVSGQQCDHCARGHNQEFPACLPCHFCFNQWDHTISSLSKAVQGL
IRLADNLEDKRETLPGCEVDFKNLRENVSAIERLLKQPLLSSGEFSEVKGYHDSVRKQFM
QLSEQLKTVFEFKDLKETIARMENETNILLENLQEEVDLQSSILNANIIDSSENITKYYH
ISESAEKKINEISPIINSSENTRNNLLAILDTVTSKENLLLEKLEQIKVPDIQILNEKVC
GERGNLPCSVSSCGGAVCMGPEGHRQCGGSSCQGTLTLSRNGLQKAQEAEAVIHHLKSQA
QRLKNQINNISELAEVSGNNTIWLSVKLENMKNQRESEEEKLNLLIKKVKKVLLEENVPP
EDIEKVANHVLDIHLPITSQNLTHELDKIQTLIQLCEDYRTDADRLNKAADGAQKLLVKA
KVAEKAADGLLNLGKTLNKMQQAHITQGQMNSSITQLTAEITKIKKNVLQAENQAKEIKN
KLNSTKQQLELEDELTLLQTKWQRSQDQVGRVKSQAESALHQAGAAEKEYVELKNQYAIL
QHETSTRGLTMETWGRVSQLKEAAVKLAEETEDKITRIAELEKKIQDLNLSRQEKADELK
QLEDQVVAIKNEIVEQENKYANCYN
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttcaactgacattttttttgcatcttgggtggctcagtggctggaaagcagag
gatgaatgtggcagaggtgcctgctatccaagcccaggcaatctccttgtgggacgcagt
gcacagctcaccgcatcttctacctgtgggctgaaaggattccaaaagtactgcattctc
agctacctagaggaggagcaaaaatgcttcatctgtgactctcgacttccatacaatcct
cacacccagcccaacagccacaccattgagaatgtaatctcgagttttgaatcacacaga
gaaaagacatggtggcagtctgaaaatggtcttgatcatgtcagcatcagattggaccta
gagacattgtttcagttcagccaccttatactgaccttcaagacttttcggcctgctgca
atgttagtagagcgttccacagactatggacatacctggaaagtgctcaaatattttgca
aaagactgtgctatttcttttcctggcatcacagctggccaggcccagaaagtaggagac
ctcgtctgtgactccagatattccgatattgagccctcaactggaggcgaggttgtttta
aaagttttggaccccagttttgaaatagaaaacccttatagctcccacatccaagatctt
gtgacattaacaaacctgaggataaactttaccaaactccatacccttggggatacttta
cttgggaggaaacaaaatgattcccttgataaatactattatgcattgtatgagatgatc
gttcagggaagctgcttttgcaatggccatgccagtgagtgtggccctttgcagaaggtg
cggggagacgttttcagccccacagcagtggttcatgggcactgtgtctgtcagcacaat
acagatggccctaactgtgagcgatgcaaggacttcttccaggatgctccttggaggcca
gctgtgggccttcaggacagcgcttgcagatcgtgcaggtgtaatggccactctgaccga
tgtcactttgacatgggcgtgtacctagccagtgggggcctcagtggaggcgtgtgtgag
gactgccagcaccacactgagggtcagcactgtgatcgctgcagacccctcttctacagg
gaccccatcaaggccatctcggatccctacgcatgccttccttgtgaatgtgaccccgat
gggaccctgtctggtggcatttgtgtgagccactctgatcctgccctgggatctgtggtc
ggccagtgcctgtgtaaggacaatgttgaaggagccaaatgtgaccaatgcaaacccaac
cactttgggctaagagcctctgaccctttgggctgcagaccctgcagctgtcaccccctt
gggagtctgccattctcgacctgtgatactgatacaggccaatgcttttgccaggcctat
gccacgggaccacgttgtgaagaatgcactgttggattctggggcctaggggaccatctc
cacggctgtgcttcctgtgactgtgctattggaggtgcttattctaacaagtgctcagcc
aaggatgggcagtgtgactgtcacccacatatcactggccgcagatgcacggaaccagcc
ccgggttatttctttgctcctttgaatttctatgtttatgaggcagaggaagctacacct
ctccaaggactggcacctttgtaaatttacattcctcccatgacttttggccaggtgtct
tctgtccacatggttttccgagagctggaagcagggagccctgttacatggactggacct
ggatttgccagggttctccctggggccggcttgagattttctgtcaacaacattcctctt
cccatgggcttcaccattgttgttcgctatgaaactcaggctgaagctgactggactgtc
cagattgtggtgaacccccctgcagttagtgggcactgcactcacaagactccacaatca
acacctgtagcattggccttgccagcaacttccagaattgcactgcttcccacacccatc
tgtttagaaccagacgtgcaatattccatagacctctatttttctcagccttggaaagga
gagtcccacactcattcttacatcctagttgattctcttggccttgttccccacaacact
tcactggaggatttctgcagcaagctggacctggaggagtactggatacaaggctgtgca
gagatggcctcggaagtgggacctcgagtgctccctgaggcctgtgagaagctcatggtc
agcatgtctgcccagatacacaacggggcagtggcctgcaagtgtcatccccagggtgca
gtcgggatcaactgtagccgacttggtggccagtgccagtgtaaacctcatgtggccggg
cgccgctgtgacacatgctcagctggaagctacagtttggggcatcatggctgtcaccca
tgtcactgccaccctgaaggttccaagagcacagtatgtgaccaagtgaccggccaatgt
gcctgtcatggaggggtgactggccgccattgtgatcggtgcctggagggttattttgga
tttcccagctgccatctttgctcttgtcatgggtttgctgaactctgtgatccagacaca
gggtcatgcttcaattgtgcaggatttacaacaggaagacattgtgagaggtgcatcgat
ggttactatggaaatccttcttcaggacaatcctgtcgtccttgcctgtgtccagatggt
ccctcaagtgatcagtattttgcccaatcctgttctcagagtccttggagctcagatata
atctgccactgtctccaaggttattcagggattcagtgtagacaatgtgctcctggtttc
tatggcaacccaagagtttctggagagccttgcaagccatgtgcctgtaacaacaacata
gatgtaactgatcccgagtcctgcagccgggtgacaggggagtgccttcgatgtctgcac
aacactcggggcccacactgccagctttgccaacaaggtcattttggatcagctctcaat
cagacctgcaaaagatgctcctgtcatccatccggagtgaatcccactgcgtgtccccct
ggtggggaagcttgccgctgtgaccctgtaactggcgtgtgcccttgtctgccccatgtc
acaggcctggcatgcgaccattgtgttgatggatactggaatctagttcctggcagagga
tgccagccgtgtgactgtgacccccagggctctcagagtagccactgtgaccagcttaca
ggccagtgcccgtgcaaacgaggccatggtgggaaacgctgcagtgagtgcaaggaaaat
tattacagagacccattcaagcgatgcatcccatgtgagtgcaacagtgaaggaacccgg
aagcctctctgtgacccagacacaggcatgtgcctctgccgggagggtgttagcggccag
caatgtgaccactgtgcccggggtcacaatcaggaatttcctgcctgtcttccatgtcac
ttctgctttaatcaatgggaccacacgatttcttccctctccaaagcagtgcaagggtta
attaggctggctgataacttggaagataaaagagagactctgcctggctgcgaggtagac
ttcaaaaacctcagagagaatgtatctgcaatagagaggcttttgaaacagccgcttctc
tcatctggagaattctcagaagtcaagggctatcatgactctgtgagaaaacaattcatg
cagctaagtgaacaactgaaaacagtatttgaatttaaagatctaaaggaaactatagca
agaatggaaaatgaaacaaacattttactcgaaaaccttcaggaggaagttgatttgcaa
tccagcatccttaatgcaaacattatagattcctcagaaaacatcacgaagtattatcac
atatcagaatctgctgaaaagaaaattaatgaaatcagtcccatcataaatagctctgaa
aataccaggaacaacttacttgccattttagatacagtcacctctaaagaaaacttgtta
ctggaaaaattagagcagattaaggtaccagatatccagatattgaatgaaaaggtatgt
ggagaaagagggaatttgccttgtagtgtgtcatcctgtgggggcgctgtctgcatgggc
cctgagggacacaggcagtgtggtggttctagctgtcaaggcactctaactctctcaagg
aacggtcttcagaaagcacaggaagcagaggctgtgatccatcatttgaagagccaggct
caaaggttgaagaaccagattaataatataagtgaactggcagaagtctctggaaataat
actatatggctaagtgtgaaactggaaaacatgaaaaaccaaagggaatctgaggaagaa
aaactgaacctcttaatcaaaaaagtgaaaaaggttttgttagaggaaaacgtgcctcca
gaagacatagagaaagttgcaaatcatgtacttgacatccaccttccaataacatcacaa
aatttaacccatgaactagacaaaatacagacacttatacaactatgtgaagactacaga
acagatgcggacaggctaaataaggcagcagatggagcccaaaaacttttggtgaaggcc
aaagtagctgagaaagcagcagatggtctattaaaccttggcaaaacattgaacaagatg
caacaagctcacatcacccaaggacaaatgaactcttctatcacacagctgactgctgag
ataacaaaaataaaaaagaatgtactgcaggcagaaaatcaagcaaaagaaataaagaac
aaactgaattccacaaagcaacagctggagctggaggatgaactgaccctgctgcagact
aagtggcaaaggagtcaagaccaagtgggcagagtgaaatcccaggctgaatctgctctt
caccaggctggggcagctgagaaggaatatgttgagctgaaaaatcagtatgctattctt
caacatgagacaagcaccagaggactaacaatggaaacttgggggcgagtcagtcagcta
aaagaagcagcagtgaaactagctgaagaaacagaggacaagataacaaggatagcagag
ttagaaaagaagatccaagacttgaatctaagtagacaagaaaaagctgatgagctgaaa
caattggaagatcaagttgttgccatcaaaaatgaaattgttgagcaagaaaataaatat
gccaactgctataattag
DBGET
integrated database retrieval system
