Perognathus longimembris pacificus (Pacific pocket mouse): 125346879
Help
Entry
125346879 CDS
T08928
Symbol
Lamb1
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04151
PI3K-Akt signaling pathway
plop04510
Focal adhesion
plop04512
ECM-receptor interaction
plop05145
Toxoplasmosis
plop05146
Amoebiasis
plop05165
Human papillomavirus infection
plop05200
Pathways in cancer
plop05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125346879 (Lamb1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125346879 (Lamb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125346879 (Lamb1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125346879 (Lamb1)
09162 Cancer: specific types
05222 Small cell lung cancer
125346879 (Lamb1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
125346879 (Lamb1)
09174 Infectious disease: parasitic
05146 Amoebiasis
125346879 (Lamb1)
05145 Toxoplasmosis
125346879 (Lamb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
ATG17_like
BNR_6
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-GeneID:
125346879
NCBI-ProteinID:
XP_048195748
LinkDB
All DBs
Position
2:100769116..100843685
Genome browser
AA seq
1787 aa
AA seq
DB search
MGLLQVFAVSVLGTLCGARVRAQEPDFSYGCAEGSCYPATGDLLIGRSQKLSVTSTCGLH
QPEPYCIVSHLQEDKKCFICNSQDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVE
NVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCESSFPGIST
GPMKKVDDIICDSRYSDIEPSTEGEVIFRALDPAFKIEDPYSPRIQNLLKITNLRIKFVK
LHTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPVHGFDEEVEGMVHGHCM
CRHNTKGLNCEQCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSG
GVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNLCEKCSCDPAGSQNEGICDGYTDFSS
GLIAGQCRCKLYVEGERCDVCKEGFYDLSAEDPFGCKSCACNPLGTIPGGNPCDSETGYC
YCKRLVMGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSPESGQCSCRPHMIGRQ
CNEVESGYYFTTLDHYLYEAEEAHLGPGVSVVQRQYIQNRIPSWTGAGFVRVPEGAYLEF
FIDNIPYSMEYDILIRYEPQLPDQWEKAVITVQRPGKIPTSSRCGNTVPDDDNQVVSLSP
GSRYVVLPRPVCFEKGVNYTVRLELPQYTSSDSDVESPYTLIDSLVLMPYCKSLDIFTTG
GSGDGEVTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHQMALACECDPQG
SLSSVCDPNGGQCQCRPNVVGRTCDRCAPGTFGFGPNGCKACDCDPQGSVNAFCDAVTGQ
CQCFHGVYGRQCDRCLPGYWGFPSCQPCQCNGHADDCDSVTGECVNCQDYTTGHNCERCF
AGYYGNPIIGSGDHCRPCPCPDGPESGRQFASSCYQDPVTLQLACVCEPGYIGSRCEDCA
SGFFGNPSDIGGSCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQLCRHGYYGD
ALRQDCRKCVCNYLGTMQEHCNGSDCQCDKANGQCLCLPNVIGQNCDRCTPNTWKLASGK
GCEPCDCHAAHSFGPSCNEFSGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGI
ETPQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPDCTPCHQCFALWDVIIAELANRTHR
FLERAKALKISGVIGPYRETMDSIEKKVNEIKDILAQSPAAEPLKNIGHLFEEAEKLTKD
VTEKMSQVEVKLADTASQNNSTAGELDLLQAEAKSLEKTVSELSEQLEFIKNSDIRGALD
SITKYFQMSLEAEERVNASTTDPNSTVNQSAAMRDRVEDLLMKRESQFKEKQEEQTSLLD
ELSGKLESLDFSSIAEMTCGTPPGADCSQSECGGPNCRTDEGQKKCGGPGCGGLVTVAHN
AWQKAMDFDQDVLSALAEVEQLSKMVSEAKLRADEAKQNAQDVLLKTNTTKEKIDKSNKD
LRNLIKQIRDFLTEDGADLDSIEAVANEVLKMEMPSTPEQLQSLTEDIRERVESLSQVEV
ILQQSAADIARAETLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED
IQGTQTLLTSIESETVASEETLLNASQRISELERNVEELKRKATQNSGEAEYIEKVVYTV
KQNADDVKKTLDGELDEKYKKVESLIAKKTEESADARRKAEMLQNEAKTLLAQANSKLQL
LKDLERKYEDNQKYLEDKAQELVRLEGEVRSLLQDISKKVAIYSTCL
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atggggctgctccaggtgttcgccgtcagcgtcttaggtaccttgtgcggagcccgagtg
cgcgcccaagaaccggacttcagctatggctgcgcagaaggcagctgctaccctgccacg
ggcgacctgctcattggccgatcccagaagctctcggtgacctcgacctgcggactgcac
cagcctgagccctactgtatcgtcagccacctgcaggaagacaagaagtgcttcatttgc
aactcccaagatccttaccatgagaccctcaatcctgacagccatctcattgaaaatgtc
gtcactacatttgctccaaaccgcctcaagatttggtggcaatctgaaaatggtgtggaa
aatgtaactatccaactggatttggaagcagaattccatttcactcatctcataatgact
ttcaagacattccgtccagctgctatgctgatagagcgatcatctgactttgggaagacc
tggggtgtgtacagatacttcgcctatgactgtgagagctccttcccaggcatttccacc
gggcccatgaagaaagtggatgacatcatctgtgactccagatactctgacatagagccc
tcaacagaaggagaggtgatatttcgtgctttggatcctgctttcaaaatagaagatcct
tatagcccaaggatacagaatctgttaaaaatcaccaacttgaggatcaagtttgtgaag
ctgcatactttgggagataaccttttggattccagaatggaaatcagagagaagtattat
tatgctgtgtatgacatggtggttcgaggaaactgcttctgctatggccatgccagtgag
tgtgcccctgtgcatggattcgatgaagaggtggaaggaatggtacacggacactgcatg
tgcaggcataacactaagggcttgaactgtgaacagtgcatggatttctaccacgattta
ccctggagacctgctgaaggccgaaacagcaatgcctgtaaaaagtgcaactgcaatgaa
cattccagctcgtgccactttgacatggcggttttcctggccacggggaacgtcagtggg
ggcgtgtgtgatgactgtcagcataacaccatgggacgcaactgtgagcagtgcaagcca
ttctactaccagcacccggagagggacatccgagaccctaatctctgtgaaaaatgttcg
tgtgacccagctggctctcagaatgaaggcatttgtgacggttacactgacttttcatct
gggctcattgctggccagtgtcggtgtaagttgtatgtggaaggagaacgttgtgatgtt
tgcaaagaaggcttctatgatttaagtgccgaagatccatttgggtgtaaatcttgtgct
tgcaaccctctgggaacaattcctggtgggaatccttgtgattctgagactggctactgc
tattgtaagcgcctggtgatgggacagcgctgtgaccagtgcctgccacagcattggggc
ttgagcaatgatctggatggctgtcggccttgtgactgtgaccttgggggagccctcaat
aatagctgctccccagagtcaggccagtgctcctgtcggcctcacatgattggacggcag
tgtaatgaggtggagtctggctactatttcaccaccttggaccactacctctatgaagct
gaggaagcccacctggggcctggggtcagcgtggtgcagcggcagtacatccagaaccgg
attccctcctggactggagcgggctttgttcgagtgcccgagggggcgtatttggagttt
tttattgacaacataccatattccatggagtatgatatcctaattcgctatgagccacag
ctccctgaccagtgggaaaaagctgtcatcactgtgcagcggcctgggaagatcccaacc
agcagccggtgtggtaatactgttccagatgatgacaaccaggtggtgtccttgtctcca
ggctccagatatgtggtccttcctcgcccagtgtgcttcgagaagggagtaaactacaca
gtgaggttggagctgccccagtatacctcctccgacagtgatgtggagagcccctacacg
ctcattgactcacttgttcttatgccctactgcaaatccctggacatctttaccacaggc
ggttctggagatggtgaggtcaccaacagcgcctgggagacctttcagaggtaccggtgt
ctggagaacagcagaagtgtcgtgaagacacccatgactgatgtttgcagaaatattatc
ttcagcatctctgctctgctacaccagatggccctggcttgtgaatgcgaccctcagggt
tctttgagttctgtgtgtgaccctaatggaggccagtgccagtgccggccaaatgtagtt
ggaaggacctgtgaccggtgtgcaccaggaacctttggctttggtcccaatggatgcaaa
gcttgtgactgtgatcctcaaggatctgtcaacgccttctgtgatgctgtcaccggccag
tgccagtgcttccatggcgtgtacgggcgccagtgtgaccgatgtttacccgggtactgg
ggctttccgagctgccaaccctgccaatgtaacggtcatgccgatgactgtgactcagtg
acaggcgagtgtgtgaactgccaggactacactacaggccataactgtgaaaggtgcttc
gctggttactatggcaatcccatcattgggtcaggagatcactgccgaccttgcccttgt
ccagatggtcctgaaagtggacgccagtttgccagcagctgttatcaagatcctgttact
ctccagcttgcgtgtgtttgtgagcctgggtacattggctccagatgtgaggactgtgct
tcgggattcttcggcaatccctcagacattggagggtcgtgtcagccttgtcagtgtcac
cacaacattgacacgactgacccggaagcctgtgacaaagagactggaaggtgcctcaag
tgcctataccacacagaaggggaccactgccaactctgccgacatggctactatggtgat
gccctccggcaggactgcagaaagtgtgtctgtaattacctgggcaccatgcaggagcac
tgtaatggctctgactgccagtgtgacaaagccaatggccagtgcttgtgtcttcctaat
gtgatcgggcagaactgtgaccgctgtacacccaacacctggaagctggccagtgggaag
ggctgtgagccgtgtgactgccatgctgcccattccttcgggccttcttgtaatgagttc
tccgggcagtgccagtgcatgccgggcttcggaggccgcacctgcagcgagtgccaggag
ctcttctggggagaccccgatgtggagtgccgagcctgtgactgtgaccctcggggcatc
gagacaccgcagtgtgaccagtccacgggccagtgtgtctgtgtggagggtgtggagggc
ccacgctgtgacaagtgcacccgaggctactcaggggtcttccctgactgcacaccctgc
caccagtgctttgctctctgggacgtgatcatcgctgaactggccaacaggacccacagg
ttcctggagagagccaaggccttgaagatcagtggcgtgatcgggccttaccgggagacc
atggactccatagagaagaaggttaacgagataaaagacattctggcccagagcccagca
gcagagccactgaaaaacatcggacatctttttgaggaagctgagaaactaaccaaagat
gttacagaaaagatgtctcaagtagaagtaaaattagctgatacagcttcacaaaacaat
agcacagctggggaactggatttgctgcaggcagaagcaaaaagcctggaaaagactgtc
agcgaactttctgaacaactagaatttatcaaaaactcagatattcggggtgctttggac
agcattaccaagtacttccagatgtctcttgaggctgaagagagggtgaatgcctccacc
acagatcccaacagcactgtgaaccagtcagctgccatgcgagacagagtggaagatttg
ctgatgaagcgggagtcccagttcaaggaaaagcaagaagaacagaccagccttcttgat
gaactgtcaggcaaactggaaagcctagatttttcatccattgctgaaatgacctgtgga
acgcctccaggggcagactgttcccaatctgagtgtggaggaccaaactgcagaacagac
gaaggacagaagaaatgtgggggccccggctgtggtggtctggtgactgtggcccacaat
gcctggcagaaagccatggactttgaccaagatgtcctcagcgccctggctgaagtggaa
cagctttccaagatggtctctgaagcaaaactgagagcagatgaagcaaaacagaatgct
caggatgttctgttaaaaacaaacaccaccaaagaaaaaatagacaagagcaataaagac
ctgagaaatctgatcaagcaaatcagagactttctgactgaggatggtgctgatctggat
agcattgaagcagttgctaatgaagtattgaaaatggaaatgcctagtaccccagagcag
ttacagagcttgacagaagacatccgtgaacgagtggaaagcctttctcaagtagaggtt
attctacagcagagcgctgctgacattgctagagcggagacgctgttagaagaagctaaa
agagccagcaaaagtgccacggatgttaaagtcactgcggacatggtgaaggaagctctg
gaagaggcagagaaggcccaggtggcagcagagaaggcaattaaacaagccgacgaggat
atccagggaacccagaccctgctaacctcgattgaatctgaaacagttgcttctgaagaa
acgttgctcaacgcctcccagcgcatcagtgagctagaaaggaatgtggaggaacttaag
cggaaggcaactcagaactctggagaggcggaatacattgaaaaagtagtatacactgta
aaacaaaatgcagatgatgttaagaagactctggatggtgaacttgatgaaaagtataaa
aaagtagaaagtttaattgccaaaaaaaccgaggaatcagctgatgccagaaggaaggct
gaaatgctacaaaatgaagcaaaaacacttttagcccaagcaaatagcaagctgcaactg
ctcaaagatttagaaagaaaatatgaagacaatcaaaaatatttagaagataaagctcaa
gaattagtgaggttagaaggagaggtccgttccctccttcaggatataagcaagaaagtt
gctatatatagcacctgcttgtaa
DBGET
integrated database retrieval system
