Perognathus longimembris pacificus (Pacific pocket mouse): 125346969
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Entry
125346969 CDS
T08928
Symbol
Abcb4
Name
(RefSeq) phosphatidylcholine translocator ABCB4 isoform X1
KO
K05659
ATP-binding cassette, subfamily B (MDR/TAP), member 4 [EC:
7.6.2.2
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop02010
ABC transporters
plop04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125346969 (Abcb4)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
125346969 (Abcb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plop02000
]
125346969 (Abcb4)
Enzymes [BR:
plop01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
125346969 (Abcb4)
Transporters [BR:
plop02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125346969 (Abcb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
Rad17
AAA_5
AAA_16
Zeta_toxin
AAA_29
G-alpha
AAA_14
AAA_7
AAA_15
nSTAND1
NTPase_1
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
125346969
NCBI-ProteinID:
XP_048195899
LinkDB
All DBs
Position
2:complement(112830366..112883687)
Genome browser
AA seq
1281 aa
AA seq
DB search
MDVEAARNGTARRSRTVEGDFELGSPSSQDRGKTKKVNLIGPLTLFRYSDWQDKLFMSLG
TIMAIAHGSGLPLMMIVFGEMTDKFVNDAGNFSLPVNFSLSMLNPGRILEEEMTRYAYYY
SGLGAGVLVAAYIQVSFWTLAAGRQIKKIRQKFFHAILRQDIGWFDINSTTELNTRLTDD
ISKISEGIGDKVGMFFQAIATFFAGFIVGFIRGWKLTLVIMAISPLLGLSTAVWAKILSA
FSDRELAAYAKAGAVAEEALGSIRTVIAFGGQNKELERYQKHLENAKQIGIKKAISANIS
MGIAFLLIYASYALAFWYGSTLVISKEYTIGNAMTVFFSILIGAFSIGQAAPCIDAFANA
RGAAYVVFDIIDNNPKIDSFSERGHKPNSIKGNLEFSDVHFSYPSRANIKILKGLNLKVQ
SGQTVALVGNSGCGKSTTVQLIQRLYDPDEGTISIDGQDIRNFNVRYLREIIGVVSQEPV
LFSTTIAENIRYGRGNVTMEEIKKAVKEANAYEFIMKLPQKFETLVGERGAQLSGGQKQR
IAIARALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTIVIAHRLSTIRNADVI
AGFDDGVIVEQGSHGELMKKEGVYFKLVNMQTSGKQIQSEEFEIELSGDKAATGMAPNGL
KSRLFRNSTNKSLKHSRVHQNGLDTETNELDANVPPVSFLKVLKLNKTEWPYFVVGTFCA
IANGALQPAISIILSEMIAIFGPGDDAVKQQKCNLFSLVFLCLGIISFFTFFLQGFTFGK
AGEILTTRLRSMAFKAMLRQDMSWFDDHKNSTGALSTRLATDAAQVQGATGTRLALIAQN
TANLGTGIIISFIYGWQLTLLLLSVVPFIAISGIVEMKMLAGNAKRDKKELEAAGKIATE
AIENIRTVVSLTQERKFESMYVENLHGPYRNSVKKAHIYGITFSISQAFMYFSYAGCFRF
GAYLIVNGHMRFKDVILVFSAIVFGAVALGHASSFAPDYAKAKLSAAHLFNLFERQPLID
SYSREGLWPEKFEGNVTFKEVKFNYPTRPDIPVLQGLSLQVKKGQTLALVGSSGCGKSTV
VQLLERFYDPLAGSVLLDGQEAKKLNIQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRF
VSQDEIVSAAKAANIHPFIETLPHKYETRVGDKGTQLSGGQKQRIAIARALIRQPQILLL
DEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIMVIQNGKVKEYGTHQQ
LLAQKGIYFSMVNIQAGTQNL
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggatgtagaggcagcaaggaacggaacagcccggcgctccaggacagtggagggcgac
ttcgaactaggcagccccagcagtcaagacagggggaaaacaaagaaagtgaatttgatt
ggaccattaacattgttccgatactcagattggcaagataaattatttatgtcccttggt
accatcatggccatagctcatggatcaggtcttccccttatgatgatagtatttggagaa
atgaccgataaatttgttaatgatgctggaaatttctccttgccagtgaatttttcactg
tcaatgctaaatccaggcagaattctggaagaagaaatgactaggtatgcctactactat
tcaggattaggggctggagttcttgttgctgcctatatacaagtttcattttggacttta
gcagctggccggcagattaagaaaatcaggcaaaaattttttcatgcgattctacgacag
gacataggctggtttgacattaacagcaccacagaactgaatacgcggctaacagatgac
atctccaaaatcagtgaaggaattggtgacaaggttggaatgttctttcaagcaatagcc
acgttttttgcaggattcatagtgggattcatcagaggatggaaacttacccttgtgata
atggccatcagccctctcctggggctctctacagctgtttgggcaaagattctctctgca
tttagtgacagagaactagctgcctatgcaaaagcaggtgccgtggccgaagaggctctg
gggtccatcaggactgtgatagctttcgggggccagaacaaagagctggaaaggtatcag
aaacatttagagaatgccaaacaaattggaattaaaaaagctatttcagcaaacatttcc
atgggcattgccttcctgttaatatatgcgtcctatgcactggccttctggtacggatcc
actctagttatatcgaaagaatatactattggaaatgcaatgacagtctttttttcaatc
ctaattggggctttcagtattggccaggcagccccctgtattgatgcttttgccaatgca
agaggagcagcatatgtggtctttgacattattgataataatcctaaaattgacagtttt
tcagaaagaggacacaaaccaaacagcatcaaagggaatttggagttcagtgatgttcac
ttttcttatccatctcgagctaatatcaagatcctgaaaggactcaacctgaaggtacag
agtgggcagacagtggccctggttggcaacagtggctgtgggaaaagcacgacggtccag
ctgatccagaggctctatgaccctgatgagggtacgattagcattgatgggcaggatatt
aggaactttaatgtaaggtacctcagggaaataattggagtggtgagtcaggagccagtg
ctattttctaccacaattgctgaaaatattcgttatggccgtggaaatgtcactatggaa
gagataaagaaagctgtcaaagaagccaatgcctatgagtttatcatgaagttaccacag
aaatttgaaaccttggttggagagaggggagcccagctgagtggtggacagaagcagaga
atcgccatagcacgtgccctggttcgcaaccctaagatcctcctgctggatgaggctaca
tcggccttggacacagaaagtgaagctgaggtccaggcagctctggataaggccagagaa
ggccggaccaccattgtgatagcccaccggttgtctacaatccgaaatgcagatgtcatt
gctgggtttgatgatggagtcattgtagagcaaggaagccatggtgaactgatgaaaaaa
gaaggggtctactttaagcttgtcaacatgcagacatcagggaaacaaatccagtcagaa
gaatttgaaattgaactaagtggagacaaggctgctactggcatggctccaaatggctta
aaatctcgcttatttaggaattctactaataaaagccttaagcattcacgagtacatcaa
aatgggcttgatacagaaaccaatgagcttgatgccaatgtgccacccgtgtcttttctg
aaggtcttgaaactgaataaaaccgaatggccatactttgtggtagggacattctgtgcc
attgctaatggagcactgcagcctgcaatttccatcatactctcagagatgatcgcaatt
tttggaccaggggatgacgcagtgaagcagcagaagtgcaacctgttctccttggttttc
ttgtgtctgggaattatttcttttttcactttcttccttcagggcttcacttttgggaaa
gctggtgagatccttactacaagattgcggtccatggcttttaaagcaatgctaagacag
gacatgagctggtttgatgaccacaaaaacagtacgggtgcactttcgaccagacttgcc
acagatgccgctcaagtccaaggcgccacaggaacgaggttggctttaattgcccagaat
acagccaatcttggaactggtattatcatatcatttatctacggttggcaattaactctt
ttactgttatccgttgttccatttattgctatatcaggaattgttgaaatgaaaatgctg
gctggaaatgccaaaagggataaaaaagaactggaagctgctggaaagattgcaacagaa
gcaatagaaaatattaggacagttgtctccttgacccaagaaagaaaatttgagtcaatg
tatgtggaaaatctgcatggaccttataggaattctgtgaagaaggcacacatctatggc
atcacttttagtatctctcaagcatttatgtatttctcctatgctggttgttttcgattt
ggtgcctatctcattgtgaatggacatatgcgcttcaaagatgttattctggtgttttca
gcaatcgtgtttggtgccgtggctctgggacatgctagttcatttgctccagactatgct
aaagccaagctctccgcagcccatttattcaacctgtttgagagacagcctttaattgac
agctacagtagagaggggctatggcctgaaaagtttgaaggaaatgtgacctttaaagaa
gtgaagttcaactatcccacccggccagacatcccagtgctccagggactgagtctgcag
gtgaagaagggccagacactggctctggtgggcagcagcggctgtgggaagagcacggtg
gtgcagctcctggagcgcttctatgacccactggctggcagtgtgctcttagatggccaa
gaagccaagaaactcaacatccagtggctcagagctcagcttggtattgtgtctcaggag
cccatcctgtttgactgcagcattgctgagaacatcgcctacggagacaacagccggttt
gtgtcccaggatgagattgtgagcgctgccaaggcagccaacatacatcctttcatcgag
acgttacctcataaatatgaaactagagtgggagataaagggactcagctctcaggaggt
cagaaacagaggattgctattgcccgggccctcatcagacaacctcagatcctactgctg
gatgaagctacatcagccctggacactgaaagtgaaaaggttgtgcaggaagccctggac
aaagccagagaaggccgcacatgcattgtgatcgctcaccgcctgtccaccatccagaac
gcagacttaatcatggtgatccagaatggcaaagtcaaggagtacggcacccaccaacag
ctgctggcacagaaaggcatctatttttccatggtcaatattcaggctggcacacagaac
ttgtga
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integrated database retrieval system
