KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125346970
Entry
125346970         CDS       T08928                                 
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop02010  ABC transporters
plop04976  Bile secretion
plop05206  MicroRNAs in cancer
plop05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:plop00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    125346970
 09150 Organismal Systems
  09154 Digestive system
   04976 Bile secretion
    125346970
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    125346970
  09162 Cancer: specific types
   05226 Gastric cancer
    125346970
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:plop02000]
    125346970
   04147 Exosome [BR:plop04147]
    125346970
   04090 CD molecules [BR:plop04090]
    125346970
Enzymes [BR:plop01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     125346970
Transporters [BR:plop02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    125346970
Exosome [BR:plop04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   125346970
CD molecules [BR:plop04090]
 Proteins
  125346970
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N ABC_ATPase AAA_16 AAA_22 RsgA_GTPase Rad17 AAA AAA_5 Zeta_toxin AAA_14 AAA_29 G-alpha AAA_7 AAA_30 APS_kinase NTPase_1 DUF815 nSTAND1 nSTAND3
Other DBs
NCBI-GeneID: 125346970
NCBI-ProteinID: XP_048195904
LinkDB
Position
2:complement(112895422..113219144)
AA seq 1271 aa
MDPEEHRDGEGKNSKLNKKSKKKEKKPTVSTLTMFRYAGWLDRLYMVLGTLAAVIHGAAL
PVMMLVFGDMTDSFADAGNSLPDNITEDLFNKTEILEKLEEDMTTYAYYYTGIGAGVLVA
AYIQVSFWCLSAGRQINKIRKEFFHAIMKQEIGWFDVHDVGELNTRLTDDVSKINDGIGD
KIGMFFQAMATFFAGFIVGFTRGWKLTLVILAISPVLGLSAALWAKILSSFTDKELLAYA
KAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEDAKRIGIRKAITANISIGAAFLLIYA
SYALAFWYGTTLVLSGEYSIGQVLTVFFSVLIGAFSVGQATPNIEAFANARGAAYEVFKI
IDNKPSIDSFSTSGHKPDNIKGNLEFRNIHFSYPSRKEVKILKGLNLKVQSGQTVALVGN
SGCGKSTTVQLIQRLYDPTEGVVSIDGQDIRSINVRYLREIIGVVSQEPVLFATTIAENI
RYGRENVTMDEIERAVKEANAYDFIMELPQKFDTLVGERGTQLSGGQKQRIAIARALFRN
PKILLLDEATSALDTESEAVVQVALDKAREGRTTIVIAHRLSTVRNADVIAGFDDGVIVE
KGNHDELMREKGIYHKLVTMQTEGYKSEFENEVCEPRSEFDALETSSKDPESSLRRRSTC
RSIRGPQCQDRKLSIKDALDENVPFVSFWRILKLNLKEWPYLVVGVLCATINGSMQPAFA
VIFSKIITVFATNDDSERKRQNSNLYSLMFLFIGIVSFITFFLQGFTFGKAGEILTRRLR
YMVFRSMLRQDVSWFDDPRNTTGALTTRLANDAAQVKGAMGSRLALLAQNLANLGTGIII
SLIYGWQLALLLLAIVPIMAIGGIIQMKMLSGQALKDNQTLESSGQIATEAIENFRTVVS
LTQEQKFEKMYAQSLQIPYRNALKKAHIFGITFSFTQAMMYFSCAACFRFGAYLVAREVM
EFEDVLLVFSAIVFGAMAVGPASSFAPDYARAKVSASHVIMLIEKVPEIDSYSTEGLKPN
IMEGNVTFNEVKFNYSTRPDIPVLQGLSLQVKKGQTLALVGSSGCGKSTVVQLLERFYDP
LAGTVLLDGREIKQLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSRIVSQDEIIRAA
KEANIHQFIDSLPDKYNTRVGDKGAQLSGGQKQRIAIARALVRQPHILLLDEATSALDTE
SEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKECGTHQQLLAQKGIYFT
MVSVQTGAKRQ
NT seq 3816 nt   +upstreamnt  +downstreamnt
atggatccagaagaacatcgcgatggagaagggaagaactcgaagctcaacaaaaaaagt
aagaagaaggaaaaaaaaccaactgtcagtacacttacaatgtttcgctatgcaggttgg
ctcgacaggctgtacatggtcctgggaactttggctgctgttatccatggagctgcactc
ccagtcatgatgctggtatttggagacatgacagatagctttgcagatgcaggaaatagt
ttaccagacaacattactgaagatctattcaacaaaactgagattctggagaaactggaa
gaagacatgaccacgtatgcctattattacactggaattggtgctggtgtgcttgttgct
gcatacattcaggtgtcattttggtgcctgtcagctggaagacaaattaacaaaattagg
aaagagttttttcatgctataatgaagcaggagataggctggtttgatgtgcatgacgtg
ggagagcttaacacccggctcacagatgatgtctccaaaattaatgatggaattggtgac
aaaattggaatgttctttcaagcaatggcaacattttttgctggttttatagtaggattt
acacgtggctggaagctaacccttgtgattttggccatcagccctgttcttggactgtca
gctgctctctgggcaaagatattatcttcatttactgataaagaactcttggcatatgca
aaagctggggcagtagctgaagaagtcttagcagccattagaactgttattgcctttgga
ggacaaaaaaaagaacttgaaaggtacaataagaatttagaagatgctaaaagaattggg
ataaggaaagctatcacagccaacatttccattggtgctgctttcctgctgatctatgca
tcctatgctctggctttctggtatgggactacattggtcctctccggtgaatattctatt
ggacaagtgctcactgtcttcttttctgtattaattggggcatttagtgttggacaggca
actccaaacattgaagcatttgcaaatgccagaggagcagcttatgaagtcttcaagatc
attgataataagccaagcattgacagcttctcaacaagtggacacaaaccagataatatc
aagggaaatctggaattcagaaatattcatttcagttacccatctcgaaaagaagttaag
atcttgaagggactcaacctgaaggtgcagagtggccagacggtggccctggttggcaac
agtggctgtgggaaaagcacgacagtccagctgatccagaggctctatgatcccacagag
ggcgtggtcagtatcgatggacaggacattaggagcataaacgtgaggtatctgcgggaa
atcattggtgtggtgagtcaggaacccgtgttgtttgccaccacaatagctgaaaacatt
cgctatggtcgtgaaaatgtcaccatggatgagattgagagagctgttaaggaagccaat
gcctatgacttcatcatggagctgcctcagaaatttgacaccttggttggagagaggggg
acccagctgagtggtggacagaagcagagaattgccatagcacgtgccctgtttcgcaac
cctaagatcctcttgctggatgaggctacgtcggccttggacacagaaagtgaagctgtg
gttcaggtggctctagataaggccagagaagggcggaccaccattgtgatagcgcatcgg
ttgtctacagttcgtaatgctgatgtcattgctggctttgatgatggagtcattgtggag
aaaggaaatcatgatgagcttatgagagagaaaggcatttaccacaaacttgttacaatg
cagacagaaggatataaaagtgaatttgaaaatgaagtttgtgaacccagaagtgaattt
gatgccttggaaacatcctcaaaggatccagaatctagtctaagaagaagatcaacttgc
cggagtatccgaggaccacaatgccaggacagaaaacttagtataaaagatgccctggat
gaaaatgttccttttgtttccttttggaggattctaaagctgaatttaaaagaatggcct
tatttagtagttggtgtactttgtgccactataaatggaagtatgcaaccagcatttgca
gttatattttcaaagattataacggtttttgcaacaaatgatgattctgaaaggaaaaga
cagaatagtaacctgtattcactaatgtttctattcattggaattgtttcttttattaca
tttttccttcagggcttcacatttggcaaagctggagaaatcctcaccaggcggctgcgg
tacatggttttcagatccatgctgagacaggatgtgagctggtttgatgaccccagaaac
acaactggagcattgactaccaggctcgccaatgatgctgctcaagtgaaaggggcaatg
ggttccaggcttgccttacttgcccagaatttagcaaaccttgggacaggaattattata
tccttaatctacggctggcaattagcccttttactcttagcaattgtacctataatggca
ataggaggaattattcagatgaaaatgttatctggacaagcactgaaagataaccagact
ctagaaagttcagggcagattgctactgaagcaatagaaaatttccgaactgtggtttct
ttgactcaagagcaaaaatttgaaaagatgtatgcacagagtttgcagataccatacaga
aatgctttgaagaaagcacacatctttggaatcacattctccttcactcaggccatgatg
tacttctcctgtgctgcatgtttccgatttggtgcctacttggtggcacgtgaagtgatg
gaatttgaagatgttctgttggtcttttctgctattgtctttggtgccatggcagttggc
ccagccagttcatttgctcccgactatgcgagagctaaagtgtctgcatcccatgtcatc
atgctcattgaaaaagtccctgagatcgacagctacagcacagaaggactaaagccaaat
ataatggaaggaaatgtgacttttaatgaagtgaagttcaactattccacccgaccagac
atcccagtgctccagggactgagtctgcaggtgaagaagggccagacgctggctctggtg
ggcagcagtggctgtgggaagagcacagtggtacagctcctggagcgcttctatgaccca
ctggctggcacagtgcttctggatggcagggaaataaagcaactgaatgtgcagtggctc
cgagcacacctgggcattgtgtcgcaggagcccatcctgtttgactgcagcattgctgag
aacatcgcttatggtgacaacagccggattgtctcgcaggacgagatcataagagcagcc
aaggaggccaacatacaccagttcattgactcactacctgataaatacaacactagagtt
ggagataaaggagctcagctctctggtggtcagaaacagcgcatcgccatagctcgagcc
ctagttagacagcctcatattttgcttttggatgaagctacatcagctctagatacagag
agcgaaaaggttgttcaggaagctctggacaaagccagagaaggccgaacatgcattgtg
atcgctcaccgcctgtccaccatccagaacgcagacctaatcgtggtgatccagaatggc
aaagtcaaggaatgtggcacccaccaacagctgctggcacagaaaggcatctattttacc
atggtcagtgtccagactggagcaaagcgccagtga

DBGET integrated database retrieval system