Perognathus longimembris pacificus (Pacific pocket mouse): 125347116
Help
Entry
125347116 CDS
T08928
Symbol
Tnpo3
Name
(RefSeq) transportin-3 isoform X1
KO
K15436
transportin-3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03013
Nucleocytoplasmic transport
plop03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125347116 (Tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125347116 (Tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plop03016
]
125347116 (Tnpo3)
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
125347116 (Tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
Importin_rep_3
Motif
Other DBs
NCBI-GeneID:
125347116
NCBI-ProteinID:
XP_048196147
LinkDB
All DBs
Position
2:complement(135481007..135567947)
Genome browser
AA seq
923 aa
AA seq
DB search
MEGAKPTLQLVYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQIRQDVESC
YFAAQTMKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMP
SWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTV
VSLLMTCVEKTGTDEKMLIKVFRCLGSWFNLGVLDSNFMANNKLLALLFEVLQQDKTSSN
LHEAASDCVCSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDEV
IHGIFKAYIQRLLHALARHCQMEPDHEGVPEETDDFGEFRMRVSDLVKDLIFLIGSMECF
AQLYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLVEVLEGVVRLPETVHTAVRYT
SIELVGEMSEVVDRNPQFLDPVLGYLMKGLCEKPLASAAAKAIHNICSVCRDHMAQHFNG
LLEIARSLDSFMLSPEAAVGLLKGTALVLARLPLDKITECLSELCSVQVMALKKLLSQEP
SNGISSDPTVFLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNKHRADNRIVE
RCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYHVHQHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCIPTFQLLEQQNGLQNHPDTVDDLFRLATRFIQRSPVTLLRSQVVIPILQWA
IASTTLDHRDANCSVMRFLRDLIHTGVANDHEEDFELRKELIGQVMNQLGQQLVSQLLHT
CCFCLPPYTLPDVAEVLWEIMQVDRPTFCRWLENSLKGLPKETTVGAVTVTHKQLTDFHK
QVTSAEECKQVCWALRDFTRLFR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgccaagccgaccttgcagctcgtgtaccaggctgtgcaggcgctctaccac
gaccccgatcccagcgggaaggaacgcgcctcgttttggcttggggagctgcagcgttcg
gtccatgcatgggagatttctgaccaattattacagatccgacaggatgtggaatcatgc
tattttgctgcacagaccatgaaaatgaagattcagacctcattttatgagctccctaca
gactctcatgcctctttacgggactcattgctaacccatatccagaacttgaaagacttg
tcacctgtcattgtaacgcagctggctttagcaatagcagaccttgccctacagatgcct
tcctggaaagggtgtgtacaaacattggtggaaaaatatagcaatgatgtaacttctctg
ccttttttgctggagatccttacagtgttacctgaagaagtacatagtcgttcattacgg
attggagcaaaccgccgtacagaaattatagaagacttggccttctattctagcacagta
gtatctctattgatgacttgcgtagaaaaaactggaacagatgagaaaatgctaataaag
gtctttcgctgtttgggaagttggtttaatttgggagttttggacagtaacttcatggct
aacaataagttactagcactcctttttgaggttttgcaacaggacaagacctcatctaat
ttacatgaagctgcttcagactgtgtgtgctcagctctttatgccatagagaatgtggag
actaacttaccattagccatgcaactttttcagggagtcctgacattggagactgcttat
catatggctgtggcacgtgaggatttagacaaagttctgaattactgccgtatttttact
gaactgtgtgaaacttttcttgaaaaaattgtttgtactccaggccaaggtctgggagat
ctacgaactctggaacttcttcttatctgtgcagggcatccccagtatgaggtggtagaa
atttcctttaacttctggtatcgactaggagagcatttatacaaaactaacgacgaggtt
attcatggcatcttcaaagcttacattcagaggctgcttcatgccttggcgcgacactgc
cagatggaaccagaccatgaaggggtgcctgaggagactgatgactttggggagtttcgg
atgagggtatcagacctggtgaaggacttgattttcttgattgggtctatggagtgtttt
gctcagttatattctactctgaaagaaggcaacccaccctgggaagtgacagaagcggtt
ctatttatcatggctgctatagcaaagagtgttgatccggagaacaatcctacactggtg
gaagtcctagaaggagttgttcgtctcccagagactgtacatacagctgtgcgatatacc
agcattgaattggttggagaaatgagtgaagtggttgatcgaaaccctcagttccttgac
cccgtgttgggctatttgatgaaaggcctgtgtgaaaaaccgctggcttctgctgcagcc
aaagccattcataacatttgctcagtctgtcgggatcatatggctcagcactttaatgga
ctcctagagattgctcgctcccttgattccttcatgttgtctccagaagctgctgtgggc
ttgctaaaagggacagcacttgtcctagcaagattacctttggataaaattactgaatgt
cttagtgaactgtgttctgttcaagttatggcattgaagaaactgttgtctcaggagccc
agcaatggaatctcctcagatcctactgtgttcttagatcgactggctgttatatttaga
cacaccaatcccattgtggaaaatggacagactcacccgtgccaaaaagtcatacaggaa
atatggccagttttgtccgagactctaaataagcatcgggctgataatcgcattgtagag
cgttgttgcagatgcttgcgctttgctgttcgctgtgtaggcaaaggatctgcagcccta
ctccagccactagtcacacagatggtgaatgtgtaccacgtacatcagcattcctgtttc
ctgtatcttggcagtatccttgtggatgagtatggcatggaagaaggctgtcggcaggga
ctattagatatgctccaggcactgtgcatccccacctttcagctcctagagcagcagaat
ggcctgcagaatcaccctgatactgtagatgacctgttcaggctagccactcggtttatt
cagcgtagtcctgtcaccttattgaggagtcaagtggtcatcccaatcttacagtgggcc
attgcctctaccaccctggaccaccgagatgccaattgtagtgtcatgaggttcctacga
gatctcatccacacaggggtagccaatgatcatgaagaagactttgaattacggaaagaa
ctgattggacaggtgatgaaccagcttggacagcaacttgtaagccagctacttcacact
tgctgcttttgtctccccccttataccttaccagatgtggctgaagtcctctgggagatc
atgcaggttgacagaccgactttctgtcggtggttagagaattctttgaaaggtttgcca
aaggagacaaccgtgggagccgtcacagtgacacacaaacaacttacagatttccacaag
caagtcactagtgctgaggaatgcaagcaagtttgctgggccttgagagacttcacaaga
ttgtttcgatag
DBGET
integrated database retrieval system
