Perognathus longimembris pacificus (Pacific pocket mouse): 125347218
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Entry
125347218 CDS
T08928
Symbol
Mkrn1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125347218 (Mkrn1)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125347218 (Mkrn1)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125347218 (Mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-rbx1
zf-C3HC4_4
zf-ANAPC11
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
125347218
NCBI-ProteinID:
XP_048196290
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All DBs
Position
2:complement(143866573..143887994)
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AA seq
479 aa
AA seq
DB search
MAEAAAPGTTAATSGAGAAAAAAAPLIPTPTVAAPSPGAGGGGGGGGGGGWTKQVTCRYF
MHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHSKPLKQEEATATDPSP
EPSLAASSSLPSGAEQLTEMDTGKAESGIPPLAAVGGASSEDWVNAVEFIPGQPYCGRTA
PPCTAAPMQSLGAKVECEKEPAAVESKKQLCPYAAVGECRYGENCVYLHGDACDMCGLQV
LHPMDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGVCMEVVYEKANPSERRFGILS
NCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLIQKYKE
AMSNKACRYFDEGRGSCPFGGNCFYKHAYPDGRREEPQRQKVGASRRYRAQRRNHFWELI
EERENSSPFDNDEEEVVTFELGEMLLMLLAAGGDDELTDSEDEWDLFHDELEDFYDLDL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggctcccggaacaacagccgcaacatcaggagccggagcggcggcg
gcggcggcggcgcccctcatcccgacccccacggtcgccgccccgtccccgggggcgggg
ggaggcgggggcggcggcggcggcggcggctggacgaaacaggtcacctgcaggtatttt
atgcacggggtttgtaaggaaggagataactgtcgctactcgcacgacctctctgacagt
ccatatggtgtagtgtgcaagtattttcaacgtgggtactgtatttacggagaccgctgc
agatatgaacacagcaagccattgaaacaggaagaagcgactgctacagatccgagccca
gaaccatctttagctgcttcctcgagtctcccttccggagctgaacagctcactgaaatg
gacacgggcaaagctgagtcaggaatcccacccctcgccgctgtaggtggggcaagttcc
gaggactgggtgaatgcggtggagttcattcctgggcagccctactgtggccggactgcc
cctccctgcaccgcagcccccatgcagagcctgggggccaaggtggagtgtgagaaggag
ccggcggcagtggagagcaagaagcagctgtgcccctatgctgcggtgggcgagtgccgc
tacggggagaactgcgtgtacctccacggcgacgcgtgtgacatgtgtgggctgcaggtc
ctgcaccccatggatgcggcccagaggtcacagcacataaaatcgtgcatcgaggcccac
gagaaggacatggagctctcgttcgccgtgcagcgcagtaaggacatggtgtgtggcgtc
tgcatggaggtggtctatgagaaggccaaccccagcgagcgccgcttcggcatcctctcc
aactgcaaccacacctactgtctcaagtgcattcgcaagtggaggagtgctaagcagttt
gagagcaagatcataaagtcctgccccgaatgccgcatcacatccaactttgtcattcca
agtgagtactgggtggaagagaaagaagaaaagcagaaactcattcagaagtacaaggag
gccatgagcaacaaagcatgcaggtatttcgatgaaggacgtgggagctgcccgtttgga
gggaactgtttctacaagcatgcgtaccccgatggccggagagaagagccacagagacag
aaagtgggagcctcgaggagataccgggcccaacgaaggaaccacttctgggagctcatt
gaggaaagagagaacagcagcccctttgacaacgacgaagaggaggtggtcacctttgag
ctgggcgagatgttgcttatgcttttggctgcaggtggggacgacgagctgacagactct
gaggatgagtgggacttgtttcacgatgagctggaagacttttatgacttggacctatag
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integrated database retrieval system
