Perognathus longimembris pacificus (Pacific pocket mouse): 125347258
Help
Entry
125347258 CDS
T08928
Symbol
Trpv5
Name
(RefSeq) transient receptor potential cation channel subfamily V member 5 isoform X1
KO
K04974
transient receptor potential cation channel subfamily V member 5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04928
Parathyroid hormone synthesis, secretion and action
plop04961
Endocrine and other factor-regulated calcium reabsorption
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
125347258 (Trpv5)
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
125347258 (Trpv5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plop04040
]
125347258 (Trpv5)
Ion channels [BR:
plop04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125347258 (Trpv5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
125347258
NCBI-ProteinID:
XP_048196339
LinkDB
All DBs
Position
2:complement(145590375..145614003)
Genome browser
AA seq
722 aa
AA seq
DB search
MGAKGPWIQLQKLLSWLIRDPDWDQHLDKLYMLQQKRMWESPLLRAAKENDLCALKRLLV
DQKCDFRQRGALGETALHVAALYDNLEAAMALIETAPALVTEPIGCEPFVGQTALHIAVM
NQNVNLVRALLARGASVCARATGFAFHLSPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG
ADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLQSLEMVPNHQGLTPFKLA
GVEGNTVMFQHLMQKRKHIQWTYGPLTSTLYDLTEIDSWGEELSFLELVVSSKKREARQI
LEQTPVKELVSLKWKKYGRPYFCVLGTLYILYMICFTTCCVYRPLKFRDGNRTSSRDNTI
LQQKLLQEAYVTYQDNIRLVGELVTIIGAVIILLLEIPDIFRVGASRYFGQTVLGGPFHV
IIITFASLVLVTMVMRLTNVDGEVVPISLALVLGWCSVMYFTRGIQMLGPFTIMIQKMIF
GDLMRFCWLMAMVILGFASAFYIIFQTEDPDNLGEFSNYPTALFSTFELFLTIVDAPANY
SVDLPFMYSIAYSAFAIIATLLMLNLFIAMMGDTHWRVAQERDELWRAQVVATTVMLERK
MPRFLWPRSGICGCDYGLGDRWFLRVENHQDQNPFRVLRYVEAFKCSDKEDGQEQLSEKR
PSIAESETLARSSLIFPTPSLSRTTSQSSSHRGWEILRRNTLGHLNIGLDLGEGGEEEIY
HF
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgggggcaaaagggccttggattcagctccagaaacttcttagctggttgattagagat
ccagactgggaccagcatctggacaagctctacatgttacaacagaagaggatgtgggag
tccccactgcttcgagcggccaaggaaaatgacttgtgtgccctgaagagacttctagta
gaccaaaagtgtgactttcgacaaagaggagccctgggggagacggcgttgcatgtagct
gccctctatgacaacctggaggccgccatggcactgatagagacggccccagctctcgtc
acagaaccgattgggtgtgagccatttgtaggtcagactgcactgcacatcgccgtcatg
aaccagaacgtgaacctggtgcgcgccctgcttgcccgcggggccagcgtctgtgccaga
gctacgggctttgccttccacctcagcccccacaacctcatctactatggagagcacccg
ctgtcctttgctgcctgtgtgggcagtgaggagatcgtccggctgctcatcgagcatggc
gctgacattcgggcccaggactccctgggaaacacggtgcttcacatcctcatcctgcag
cccaacaaaacctttgcctgtcagatgtacaacctgctgctgtcgtatgatggaggggac
cacctgcagtccttggaaatggtgcccaaccaccagggcctcacccccttcaagctggcc
ggagtggagggcaacacagtgatgttccaacacctgatgcagaagcggaagcacatccag
tggacgtacgggccgctcacctccaccctctatgacctcaccgagatcgactcttgggga
gaagagttgtcgtttctggagctcgtggtctcctccaagaagcgcgaggctcgccaaatc
ctagaacagactccagtgaaggagctggtgagcctaaagtggaagaaatacgggcggccc
tacttctgtgtactgggcaccttgtacatcctgtacatgatctgcttcaccacttgctgt
gtctaccgccccctcaagttccgagatggcaaccgcacaagttctcgggataacaccatc
ctccaacagaagctcctgcaggaggcctatgtgacttaccaggataacatccggctggtg
ggggagctggtgaccatcattggggctgtgattatcctgctcctagagatcccagacatt
ttcagagtcggagcctcgcgatattttggacagacagtccttgggggtccatttcatgtc
attatcatcacttttgcctcccttgtgctggtgaccatggtgatgaggctcactaatgtg
gatggggaagtggtacccatatccttggccctggtgttgggctggtgcagtgttatgtac
ttcactcgaggaattcagatgctgggtcccttcaccatcatgatccagaagatgatattt
ggagacttgatgcgtttctgctggttgatggctatggtcattctgggatttgcctctgca
ttctatatcattttccagacagaagacccagacaatctgggggaattctcgaactatccc
acggcactgttcagcaccttcgagctgttcctcaccatcgtcgacgcccccgccaactac
agcgtggatctgcccttcatgtacagcatcgcttactccgccttcgccatcatcgccacc
ctgctcatgctcaacctcttcatcgccatgatgggtgacactcactggcgcgtggcccag
gagagggacgagctctggagagcccaggttgtggccaccacagtgatgctggaaaggaag
atgcctcgcttcctgtggcctcgatcgggcatctgtgggtgtgactatggcctgggagac
cgctggttcttgagagttgagaaccaccaagaccagaatccttttcgggtgcttcgctat
gtggaagctttcaaatgctctgacaaagaggatggacaggagcagctgtctgagaaacgg
ccctctatagctgagagtgagactctagcgaggtcctctctgatcttcccaacaccctcc
ctgtccaggaccacatcccaaagcagcagccatcggggttgggagatccttcgtcggaac
accctgggacacttgaatattgggctggacctcggtgaggggggtgaagaggagatctat
catttctga
DBGET
integrated database retrieval system
