Perognathus longimembris pacificus (Pacific pocket mouse): 125347361
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Entry
125347361 CDS
T08928
Symbol
Dync2i1
Name
(RefSeq) cytoplasmic dynein 2 intermediate chain 1 isoform X1
KO
K22869
WD repeat-containing protein 60
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
plop03037
]
125347361 (Dync2i1)
Cilium and associated proteins [BR:
plop03037
]
Primary cilia and associated proteins
Dynein and associated proteins
125347361 (Dync2i1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
WD40_RFWD3
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
125347361
NCBI-ProteinID:
XP_048196505
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Position
2:154525494..154605092
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AA seq
1135 aa
AA seq
DB search
MEPGKRRTKDDTWKAEDLRKHLWAVQSGSPKEDKKHREKKLHKDPEMDFLEYKEHKYRDP
DRDARHRERAGERDLYPSKENPYGERDREKHREKRKDTKDREKEKLKEKHREQDAEKSHS
RGKDREKEKDRRPRKEEMRQTAAYHNILIREARDRQLLDRADKKIRSGSKVRIEEKERRE
EDSERVDEDRERRYRERKLQYGDNKDNPLKFWLYKEEDERRHRKPREVDREKKHQEKSST
REKREKHLKEKGNLLTDKEGEERHREKRYRDLDDERHRSHTERKERVSKDEHKKRESKNG
EHRNRGARLKRDGTGSQHAEDLVRSIGKDKDSRRKHSREDSSSVRTVTQRQGGEESVVDN
KEHGCWIVWGLHSFDEAAVPLTEEGDVPSVVCSWWAAVWILNMDVVWPSCFPRKEIGKEA
NDLQNAGPDEISANFEDDFEDYEDDFEVCDGDDDESNYDPDSQEKSEELPLAQKREIQEI
QKAINAENERIGELSSKRFPKQSRVECEKQFQADANNSPSRTPVCGIFVDFATASHRQKS
RSQALKQKTRSTKLLRLIDLDFSFTFSLLDLPPVNEYDMYIRNFGKKNTKQAYVQYNDDN
VERDVQTEDIETREVWTQHPGESALVSGGSRDRDISDAAAVLKIDTPRLSSFLRAACQVV
AVLLEEDRLAAKPSWQLTVEDNSLHVSDSSCQLNTDLSFLQNRKVLCLHASQVQRQTVVS
VHDLPGKTFSPSLDSRFLLCVWDIWQPSGPQKVLICESKVTCCCFSPFKAFLLFSGTVHG
SVVVWDLREDSRIHHYVRLKDCLWTFRTPTFSTDGILTSVNHRSSLQAIEPVATSVYKKQ
SFVLSPFATQEEMSGLSFHIASLDESGILNMWVVVELPKADIAGSMSDLGLLPGGRIKLV
HSSVIQLGNSLHWKDSEFWGPTQTLSVKFLPSDSNHFIVGTDLGLISHGTRQDLRVSPKL
FKPQQPGIRPVKVNVIDFSPFGESIFLAGCSDGSIRLHQLTSEWPLAQWDSSTEGSAITS
LQWSPTRPAVFLARDAASRVYVWDLLESDLGPVATQLISPDRLVAMTVMGESDKAGGSFL
ALALARASGTVDIQYLKRQWTIPKADEHSQLHLLLQEGPWNMEHCSRSTRVSPYT
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgggaagagaagaactaaagatgatacttggaaggcagaggacctcagaaaa
cacctttgggctgtacaatcaggtagtccaaaggaagacaagaaacacagagaaaagaag
ctgcacaaggatccagaaatggacttcctcgaatacaaagaacataagtacagggaccca
gaccgagatgcgcggcacagagaaagggctggcgagagagacctgtacccctctaaggag
aatccttatggggaaagagaccgagagaaacacagggaaaagagaaaggacacaaaagac
cgggagaaagagaagttgaaagagaaacatcgggaacaagatgcagagaagtctcacagc
aggggaaaggacagagaaaaagagaaggatagaaggcccaggaaagaagagatgaggcag
actgccgcctaccacaacatcctgatccgggaggcgcgggaccggcagttgctggacaga
gcagacaagaagatccgttcaggtagtaaagtacgaattgaagagaaagaaaggagagaa
gaagattctgaaagggtggatgaagatagagaaagaagataccgagaaagaaagctgcaa
tatggtgacaataaagacaatcctctcaagttctggctttataaagaagaagatgaacga
agacacagaaagcctagagaagtagatagagaaaagaaacaccaagaaaaaagcagcaca
agagagaaaagagaaaaacatttgaaagaaaaggggaaccttctcactgacaaggaaggg
gaagagagacacagagaaaaacgttatagagatcttgatgatgagaggcatcgaagtcac
acagagagaaaagagagagtgtccaaagacgagcataagaagagggagtccaagaatggt
gaacacagaaatcgaggtgcacgtttgaaaagagatgggactggcagccagcatgcagag
gatttagtaaggagtattggaaaggataaagattcaagaaggaagcatagccgggaggac
agctcctcagtgcggacggtgacccagcgtcagggaggtgaagaatcagtggtggataac
aaggagcatggctgctggattgtgtggggtctacatagtttcgatgaagctgcagttcct
ctgactgaagagggagatgttccaagtgtcgtctgcagctggtgggcagctgtctggatt
ctgaacatggatgtggtttggccgagttgctttcctagaaaggaaattggaaaggaggcc
aatgatttacagaatgctggacctgatgaaatttcagccaattttgaagatgattttgaa
gattatgaggatgactttgaagtttgtgatggagatgatgatgagagcaattatgatcct
gactcacaagaaaaaagtgaagaacttcctctagcccagaaaagggaaatacaagaaatt
caaaaagccatcaatgcagaaaatgaaaggattggcgagctatcttcaaaacgtttccca
aagcaaagtcgggtggagtgtgaaaagcaattccaggcagatgcaaacaattccccttcc
agaactcctgtttgtggaatttttgtggattttgcaacagcctcacaccgtcaaaagagt
cggagtcaggcccttaaacaaaagacaagaagtacaaaactactccggcttattgactta
gatttttcattcactttctccctcttggatttgcctccagtaaatgaatatgatatgtat
atcagaaactttgggaaaaaaaataccaagcaggcatatgttcagtataatgatgataat
gttgaaagagacgtgcagactgaagacatagagaccagggaagtgtggacccaacaccca
ggagaaagtgcccttgtctcaggaggtagtagggacagagatatctctgatgcagcagct
gtactaaagattgatactccaagattatccagttttctccgggcagcgtgtcaggtggtt
gctgttttgcttgaagaggaccgtttggcagccaaacccagctggcagctcacagttgaa
gataattccctacatgttagtgacagttcctgtcagctgaacactgacctgtcattcctt
caaaatcgaaaagtactctgcttacatgcctctcaagttcagaggcagactgtggtctcc
gtccatgacttacctggaaagacgttctccccatcactggacagcagattccttctttgt
gtgtgggacatttggcagccttcagggccccagaaggttctgatatgtgagtccaaggtt
acatgttgctgcttcagcccttttaaagcattcttgctgttttcggggacagtccatggc
tcagtggttgtgtgggacttgagagaagactccagaatacaccattatgtgaggctgaag
gactgcttatggacattcaggacaccgacattttccactgatggaattcttacatcagta
aaccaccgaagttctcttcaagccatagagcctgttgctacatctgtctacaaaaaacag
agttttgtgctttctcccttcgctactcaggaagaaatgtcaggtttgtcgttccacatc
gcttccttagatgagagcgggattctcaatatgtgggtggttgttgaattaccaaaggca
gatattgcaggctcaatgagtgatttgggtctcttacctggagggagaatcaagttggtg
cacagttctgtgatccagttgggtaacagtcttcactggaaagacagtgaattctggggg
cctacacaaacactgagtgtcaaatttctgccttcagattctaatcactttattgttggc
acagacctgggtcttataagccatggcacaagacaagatttgagagtatctcccaaactg
ttcaaacctcagcaacctggcataagaccagtaaaagttaatgtgattgatttttcacca
tttggagaatcaatattcttggctggctgctctgatggaagcatcaggctgcaccagttg
acttctgagtggcccctggcccaatgggacagcagcaccgaaggctctgctatcaccagc
ctgcagtggtccccgacaaggcctgctgtgttcctggctcgggatgctgcgtccagagtc
tatgtctgggacctccttgagagtgacctggggcctgtggctacacagctcatctctcca
gacaggctggtggccatgactgtcatgggtgagtcagacaaagctggtggcagctttctg
gccctggcactggccagggcttctggcactgtggatatccagtacctgaagaggcagtgg
acgatcccgaaggcagacgagcacagccagctgcatctgcttctgcaggaaggcccatgg
aacatggagcactgctcaaggagcacgcgtgtgtcaccttacacttaa
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