Perognathus longimembris pacificus (Pacific pocket mouse): 125347734
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Entry
125347734 CDS
T08928
Symbol
Rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03030
DNA replication
plop03410
Base excision repair
plop03420
Nucleotide excision repair
plop03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125347734 (Rfc5)
03410 Base excision repair
125347734 (Rfc5)
03420 Nucleotide excision repair
125347734 (Rfc5)
03430 Mismatch repair
125347734 (Rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plop03032
]
125347734 (Rfc5)
03036 Chromosome and associated proteins [BR:
plop03036
]
125347734 (Rfc5)
03400 DNA repair and recombination proteins [BR:
plop03400
]
125347734 (Rfc5)
DNA replication proteins [BR:
plop03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125347734 (Rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
125347734 (Rfc5)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125347734 (Rfc5)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125347734 (Rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
125347734 (Rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_16
AAA_11
AAA_24
AAA_22
AAA_assoc_2
AAA_14
RuvB_N
DEAD
DUF815
ResIII
AAA_5
AAA_19
TIP49
PhoH
ATPase_2
AAA_7
AAA_30
nSTAND3
TniB
DNAX_ATPase_lid
bpMoxR
Mg_chelatase
Thioredoxin_6
AAA_3
Motif
Other DBs
NCBI-GeneID:
125347734
NCBI-ProteinID:
XP_048196663
LinkDB
All DBs
Position
3:complement(82717342..82730746)
Genome browser
AA seq
453 aa
AA seq
DB search
MLTGGGQACRFGLDSGSFSASERATEQAVEAELEEGWRLAASGNLATGALATDRGRDQGR
KSEAGHQVSRRSDLRARKLSTGETKSREIRVCARTPSAAGVGSRPVLVAVFPALLGLRAM
EQQPPAVAKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYGPPGTGKT
STILACAKQLYKDKEFNSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEA
DAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLE
HVVQEEKVDISEDGMKALVTLSTGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDI
ANILDWMLNLDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRVDFPSSVRIHLLTKMAD
IEYRLSVGTNEKIQLSSLIAAFQVTRDLIVAEA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgctgactggcggcggtcaggcctgcaggttcggcttggactctggaagcttctcagca
tccgagagagctacagagcaggccgtagaggcggagctagaggaaggatggcggctggcc
gcttccggtaacttagcaaccggcgccttggcaacggacagggggcgggaccaagggagg
aagtcggaagcaggtcaccaagtctcgcgaaggtcggatctacgcgcacggaagctaagt
actggggagacgaagtctcgcgagatccgggtttgcgcgcggactccgagtgccgcgggg
gtcggttcgcggccggtgctagtggcggtgttcccggccctccttggtcttcgcgctatg
gagcagcagccgcccgcagtggccaagatcaggaacctgccctgggttgagaaatacagg
ccacagacactgaatgatctcatttctcatcaggacattttgagtaccattcagaagttt
atcagtgaggatcgcttgccacacctacttctttacggccctccggggacaggaaaaaca
tccaccatcctggcctgtgctaaacagctgtacaaagataaagaattcaactccatggtc
ttggagctgaatgcttcagatgaccgaggcatagacatcgtgcggggcccaatcctgagc
tttgccagcacaaggacgatatttaagaaagggtttaaacttgtgatcctggacgaagct
gacgccatgactcaggacgcccagaatgccttgcgccgagtgattgagaagttcacagaa
aataccagattttgtctcatctgcaactatctgtccaagatcatccctgccctgcagtcc
cgctgcaccaggttccggttcgggcccctgacgccggaactcatggttccccgcctggag
cacgtggtccaagaggagaaagttgacataagtgaagatggaatgaaagcacttgtgact
ctgtccactggagatatgcgcagggctctgaacattctgcagagcaccaacatggccttt
gggaaggtgacagaggagactgtgtatacctgcacaggacacccgctgaagtcagacatt
gctaacattttggactggatgttgaacctggacttcaccactgcctacagaaatataatg
gagctgaaaacactgaagggcttggcattacacgacatcctgacagagattcacctgttt
gtgcacagagttgactttccatcttcagttcgaatacatttactgaccaaaatggcagac
attgagtacagactctctgttggcaccaacgagaagattcagctgagttccctcattgct
gcctttcaagtcacccgagacctgattgtcgcagaggcgtag
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integrated database retrieval system
