Perognathus longimembris pacificus (Pacific pocket mouse): 125347739
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Entry
125347739 CDS
T08928
Symbol
Cux2
Name
(RefSeq) homeobox protein cut-like 2
KO
K09313
homeobox protein cut-like
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125347739 (Cux2)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
125347739 (Cux2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
DUF4407
Golgin_A5
MLTR_LBD
DUF4618
ATG17_like
Motif
Other DBs
NCBI-GeneID:
125347739
NCBI-ProteinID:
XP_048196669
LinkDB
All DBs
Position
3:complement(85798886..85889977)
Genome browser
AA seq
1832 aa
AA seq
DB search
MEPQGGKPWVLGECGGSIRPYPGAACPGQGRELGYSLLLPTGAPVADSLTCWFLGVLTAR
TPTAGDPERTELRGESGRPRVLVSLVAFTTNATTGLFMICSYLYTCFHRSLVFGTECAEA
LGKDTPSDARPRVHERGMLALPPTAPPLRSWLEHYDQEDFLSLGLQDAASAAPPIGSSCL
LAPARAGARAAPSQTYTEQFVDEQTDGFKSQLCSELAVGPWSIFVARRSDSGVTVDPAPV
SRFSSQSLELSEEIMPPLRLDAALPAGSLMKAGAAWFLPKLLISCSNCTKWTLGSLATAS
EKPAQIHWLHLSERGPRRPSLGAAVLGPRCMVHTPSSSLALHCKCTAPAWRRHPSLCLSR
STIHHESTWSFVFLKFLRARGLAGGVKEGAVASGRASGCKECNSLASELCAPQEESKPSH
KHLIELRREFKKNVPEDIREMVAPVLKSFQAEVVALSKRSQEAEAAFLSVYKQIIEAPDP
VSAFEVGRSLDDRLQPPSWDPSSQRRPDPHLSWKRRPERLGPTEQRNGLCPPGPTLTESS
RVPGGPGKARLTDTLLHRNEAEKQKGLQEVQLTLAARLGEAEEKIKVLHSALKATQTELL
ELRRKYDEEAASKADEVGLIMTNLEKANQRAEAAQREVESLREQLASVNSSIRLACCSPQ
GPSGDKVSFALCSGPRLEAALASKDREILRLLRDAQHLRHSLQELEEASANQIADLERQL
AAKSEAIEKLEGKLRAQSDYEEIKTELSILKAMKLASSSCSLPQGLAKADDSVLLARETF
FPAPKFLLDKPALLASPEEDPSEEDSIKCSLGTEAPYPPPQELPPPPGPEDPLSPSPGQP
LLGPGLGPDGARTFSLSPFPSLASGDTLLPRHVASPAAFKGEPGGLLVFPTAFYSTKPPP
APATPVPGPEPPGASEPADGARPAAAEEEQLDTADIAFQVKEQLLKHNIGQRVFGHYVLG
LSQGSVSEILARPKPWRKLTVKGKEPFLKMKHFLSNEQNVLALRTVQVRQRGSITPRIRT
PETGSDDAIKSILEQAKKEIESQKGGEPSAAPAGGPGAAAGSTSEAAIRGILERARREMQ
AQQRALLELEGARRPAASPPAREPDPEPEPGPGPGPEPPAPAAAVKLEDGGPAPRPALSP
AAFVQSIIRKVKSEIGDAACYLDPPWAPGRAPASPSPSSASSASGPPGARGARAEAEDEA
EDEARPELKAEGAEAPGGARAPFPPFAPRALRPTVPPLTPEQYELYMYREVDTPGLTRRV
KEKLAKNGICQRVFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLSDQLGQ
AGTQPPSTSQASPPELRSSPSPPPSPMAPEKSSPEPLSLSLESSKENQQPEARPGATPTG
KTYSGQAVGGIQEIVAMSPELDTYSITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLL
SRPKPWHKLSLKGREPFVRMQLWLSDPHNVDKLRDMKKLEKKAYLKRRYGLISPGSDSES
PATRSECPSPCPQPLELSLLQVKKPRVVLAPEEKEALRRAYQLEPYPSQQTIELLSFQLN
LKTNTVINWFHNYRSRMRRETLVEGAQDEQELDPSGGSGHCPPDPAPKSPTSETEEQKPA
LKELELPACGAGAVPLSAPDGAHVRVKQERTEEGGCEPQDLGEPDPGCGSPKEEHVDPPG
TEEIPEVALGPLLPEGLSPDCPWRHPSQESEAGVQLRPHPGPPGFLPASESPHRSLEEPL
TSPSAASSPDLAASSVSPVPSSAGPLSPSPPSAPPASMPSASPTADTTGALHPSAKGNPN
LQRRHEKMANLNSIIYRLEKAANREEALEWEF
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atggagccccaaggaggaaaaccctgggtccttggggagtgtgggggctccatccgtcca
tatccaggggctgcttgtcctgggcagggcagagagctgggctacagcctgctcctgccc
acgggagctccagtggccgacagcctcacttgctggttcttgggggtcctgactgccagg
acccccactgctggggaccctgagaggacagagctgcggggtgagagcgggaggccgcgc
gtgctggtgtccctggtggctttcaccactaatgccaccaccgggctcttcatgatctgc
agctacctgtacacctgtttccaccgatctttggtgtttggcactgagtgtgcagaggcc
ctgggcaaggacacgccctctgacgcccgtcctcgcgtccatgaacgtggtatgctggcc
ctgcctcccacagctccccccttgcgctcctggctggagcactatgaccaagaggacttt
ttgtccctagggctgcaggacgcagcttccgctgcacctcccattgggtcctcgtgcctc
ttggcaccagcacgggccggggctagggctgccccttcacagacatacacagagcagttt
gtggatgagcagacagatgggttcaagtcccagctctgttctgaactcgctgtgggacct
tggtccatattcgtggccaggaggtctgacagtggggtgacggtggacccggcccccgtg
tccaggttttcttcacaatctctggagctttctgaagagatcatgcctcccctgagactt
gatgcagccctgcctgcaggtagcctaatgaaggcgggcgctgcctggttcctgcccaaa
ctcttgatttcttgctccaattgcaccaagtggactctgggaagcctggccactgcctct
gagaagcctgcgcagatccactggctgcacctgtcggagcggggtccccgaaggccaagc
ctgggtgcagctgtgctcggcccccggtgcatggtccacacaccttccagctccttggcc
ttgcactgcaagtgcactgcacccgcttggcgccgacacccctccctctgcctgtctaga
agcaccatacaccacgagtccacctggagcttcgtcttcctgaagttcctgcgggcccgg
ggcctggctggaggagtgaaggaaggagcagtagcgagtggacgagcgagcggctgtaag
gagtgtaattccctggcgtctgagctgtgtgcgccgcaggaggagagcaagccgtctcat
aaacatttaatcgaactccgacgggaatttaagaaaaatgtacctgaggatatcagagag
atggtggctcctgtgttaaaaagcttccaagccgaggtggtggctctcagtaagaggagt
caagaggcagaggcggcttttctgagtgtttacaagcagatcattgaagcgccagacccc
gtgtccgcgtttgaggtggggcgcagcctggacgaccgactgcagccccccagctgggac
cccagcagccagcgccggccagaccctcacctctcgtggaagcggcgccctgaacgcctc
gggcccacagagcagaggaacgggctgtgtcccccaggacccaccctgaccgagagcagc
cgtgtgcccggaggccccgggaaagcccgcctgacagacaccttgctgcaccggaatgag
gcagagaaacagaagggcctgcaggaagtccagctcaccctggcagccagactgggggag
gccgaggagaaaatcaaggtgttacattcagcgctgaaggctacacagacggagctgcta
gagctgcgccggaagtacgatgaggaggcggcctccaaggcagatgaagtgggcctgatt
atgacaaacctggagaaggccaaccagagagctgaggctgcccagcgggaggtagagagt
ctccgggaacagctggcctccgtcaacagctccatccgcctggcctgctgctccccacag
gggcccagtggggacaaggtgagctttgccctgtgctccgggccgcggctggaggccgca
ctggcctccaaggaccgggagatcctgcggctgctgcgggacgcccagcacctgcggcac
tccctgcaggagctggaggaggcctccgccaaccagatcgccgacctggagcgccagctc
gccgccaagtccgaggccatcgagaaactggaggggaagctccgcgcccagtctgattat
gaagagattaaaacggagctgagcatcctcaaagccatgaagctggcctccagctcctgc
agccttccacagggcctggccaaggccgatgattctgtgctcctagccagggagaccttc
ttccccgcacccaagttcctgctagacaagccggcgctcctggccagccctgaggaggac
ccctcagaagaggactccatcaagtgctcgctgggcacggaggccccctacccgccacct
caggagctgccccctccaccgggccccgaggacccgctctcgcccagcccagggcagccc
ctgctgggccccggcctggggcccgacggcgcacggacgttctcgctgtcccccttcccc
agcctggcgtcgggggacacgctgctgcccaggcacgtcgcgtccccagctgccttcaag
ggggagcccggcggcctgctggtgttccccacggccttctacagcaccaagcccccccca
gcccccgccaccccggtgccagggccagagccccccggagcctccgagccagccgatggg
gccaggcccgcggcggccgaggaggagcagctggacacggccgacatcgccttccaggtg
aaggagcagctgctcaagcacaacatcgggcagcgcgtgttcggccactatgtgctgggc
ctgtcccagggctcggtgagtgagatcctggccaggcccaagccctggcgcaagctcacg
gtgaagggcaaggagcccttcctcaagatgaagcacttcctgtccaacgagcagaacgtg
ctggcgctcaggaccgtgcaggtgcggcagcgaggtagcatcactccgagaatccgcact
ccagagacaggctctgatgatgccatcaagagcattctggagcaggccaagaaggagata
gagtctcagaaggggggcgagcccagcgcggccccggcgggcggcccgggcgcggcggcg
ggcagcacgtcggaggcggccatccgcggcatcctggagcgcgcgcggcgggagatgcag
gcgcagcagcgggcgctgctggagctggagggcgcgcggcggcccgcggcgtcgcccccc
gcgcgggagcccgacccggagccggagccggggccggggccggggcccgagccgcccgcg
cccgccgccgccgtgaagctggaggacggcggccccgcgccgcggcccgcgctctcgccc
gccgccttcgtgcagagcatcatccgcaaggtcaagtccgagatcggcgacgccgcctgc
tacctcgacccgccctgggcgccgggccgcgcgcccgcctcgccctcgccctcctcggcc
tcctccgcctcggggccgcccggggcccgcggcgcccgcgccgaggccgaggacgaggcc
gaggacgaggcgcggcccgagctcaaggccgagggcgccgaggcgccggggggcgcgcgc
gccccgttcccgcccttcgcgccgcgcgcgctgcgccccacagtgccgccgctgacgccc
gagcagtacgagctgtacatgtaccgcgaggtggacacgcccggcctcacgcgcagggtc
aaggagaagctggccaagaacggcatctgccagcgggtcttcggggagaaggtgctgggc
ctgtcgcagggcagcgtgagcgacatgctatctcggccaaagccctggagcaagctgaca
cagaagggccgggagccattcatccgcatgcagctgtggctgtcggaccagctgggccag
gcggggacccagccacccagcacctctcaggccagtcccccggagctgaggtcctcaccg
tcaccacccccaagccccatggcacctgagaagagctccccagagcccctgagcctctct
ctcgagagcagcaaggaaaaccagcagcctgaggcgcgcccaggcgccacacccaccggg
aagacctactctggccaggccgtagggggcatccaggaaattgtggccatgtcccccgag
ctggacacgtactccatcaccaagagggtcaaagaggtgctcacggataacaacctaggg
cagcggctgtttggagagagcatcctggggctcactcagggctctgtgtccgacctgctg
tcccggcccaagccctggcacaagctgagcctgaagggcagggagccattcgtccgcatg
cagctctggctcagcgacccccataacgtggacaagctgcgggacatgaagaagctggag
aagaaagcctacctgaagcgccgctatgggctcatcagccctggctcggacagcgagtcc
ccggccacacgctccgagtgccccagcccgtgcccacagcccctggagctgagcctgctg
caggtgaagaagcctcgggtggtgctggcccctgaggagaaggaggcgctgcgcagggcc
taccagctggagccctacccctcacagcagaccatcgaactactgtccttccagctcaac
ctcaagaccaacaccgtcatcaactggttccacaactacaggtccagaatgcgccgggag
acactggtggagggagcccaggatgagcaggagctggaccccagtgggggctccggccac
tgtcccccggaccccgccccgaagagccccacctcggagactgaggagcaaaagccggcg
ctgaaggagctggagctgccggcctgcggggccggggccgtgcccctctctgccccggat
ggggcccacgtaagggtcaagcaggagcggaccgaggaggggggctgtgaaccccaggac
ttgggggagccagacccaggctgtggctcccccaaggaggagcacgtagaccctccaggc
accgaggagatccctgaagtggccctggggcccctcctcccagaggggctctccccagac
tgcccttggcgacacccctcccaggagagcgaggcaggggtgcagctgcgcccccacccc
ggcccgccaggcttcctgcccgcctcagagtcgccccaccgcagcctggaggagcctctg
acctcgccctccgcggcctcctcgccggacctggctgcatcctccgtgtcccccgtcccc
tcctccgcgggccccctctccccctccccgcccagcgccccacccgccagcatgcccagt
gccagccccacggctgacaccaccggggccttgcaccccagtgccaaggggaaccccaac
ttgcagcggcggcatgagaagatggccaacttgaacagcatcatctaccggctggagaag
gcggccaaccgcgaggaggccctggaatgggagttctga
DBGET
integrated database retrieval system
