Perognathus longimembris pacificus (Pacific pocket mouse): 125347841
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Entry
125347841 CDS
T08928
Symbol
Sox21
Name
(RefSeq) transcription factor SOX-21 isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125347841 (Sox21)
Transcription factors [BR:
plop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125347841 (Sox21)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125347841
NCBI-ProteinID:
XP_048196752
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Position
3:11045451..11046512
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AA seq
276 aa
AA seq
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MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTEAEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGVADAEHPALKAGAGLHAG
AAGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAAGSPYSLLDLGSKMA
EISSSSSGLPYASSLGYPSAGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYMIPCNC
SAWPSPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcccgtggaccacgtcaagcggcccatgaacgccttcatggtgtggtctcgc
gctcagcggcggaagatggcccaggagaaccccaagatgcacaactcggagatcagcaag
cggctgggcgccgagtggaagctgctgaccgaggcggagaagcggccgttcatcgacgag
gcgaagcgcctgcgcgccatgcacatgaaggagcaccccgactacaagtaccggccgcgg
cgcaagcccaagacgctgctcaagaaggacaagttcgccttcccggtgccctacggcctg
ggcggcgtggcggacgccgagcacccggcgctcaaggcgggagccgggctgcacgcgggc
gcggccggcggcctggtgccggagtcgctgctcgccaacccggagaaggcggccgccgcc
gccgccgccgccgccgcgcgcgtcttcttcccgcagtcggccgccgccgccgccgccgcc
gcggccgccgccgccgcgggcagcccgtactcgctgctcgacctgggctccaagatggca
gagatctcgtcgtcgtcgtccggcctgccctacgcctcgtcgctgggctacccgagcgcg
ggcgccggcgccttccacggggcggcggcggcggctgcagcggcggccgcggccgccggg
gggcacacgcactcgcaccccagcccgggcaacccgggttacatgatcccgtgcaactgc
agcgcgtggcccagccccgggctgcagccgccgctcgcctacatcctgctgccgggcatg
ggcaagccgcagctggacccctacccggcggcctacgccgccgcgctatga
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