Perognathus longimembris pacificus (Pacific pocket mouse): 125347914
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Entry
125347914 CDS
T08928
Symbol
Lingo3
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125347914 (Lingo3)
Membrane trafficking [BR:
plop04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
125347914 (Lingo3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
I-set
Ig_3
LRR_5
ig
Ig_2
LRR_LRWD1
LRRNT
V-set
LRR_9
LRR_6
Sp38
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
125347914
NCBI-ProteinID:
XP_048196805
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All DBs
Position
3:64302159..64303988
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AA seq
592 aa
AA seq
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MTCWLRMLSLHLLLLPAAPPPAGGCPARCECAAPTRSVACARRRLTAVPDGIPAETRLLE
LSRNRIRCLNPGDLAALPALEELDLSQNVIAHVEPGAFADLPRLRVLRLRGNQLKLIPPG
VFTRLDNLTLLDLSENKLVILLDYTFQDLHSLRRLEVGDNDLVFISRRAFAGLLALEELT
LERCNLTALSGESLGHLRGLGALRLRHLAIAALEDQNFQKLPGLLHLEIDNWPLLEEVAA
GSLQGLNLTSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELH
LAGALLAVVEPQAFLGLRQIRLLNLSNNLLSTLEESTFHSVNTLETLRVDGNPLACDCRL
LWIVQRRKTLNFDGRLPACATPAEVRGDALRNLPDSVLFEYFVCRKPKIRERRLQHITAA
AGDDVRFLCRAEGEPAPAVAWVTPQHRAVTANSAGRARVLPGGTLEILDTRPQDSGTYTC
VASNAGGNDTYFATLTVQPEPATNRTPGEGRNETLLAARFPLDLTTILVSTAMGCITFLG
VVLFCFVLLFVWSRGRGQHKNNFSVEYSFRKADGPAAAAGQGGARKFNMKMI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgacctgctggctgcgcatgctcagcctgcacctgctgctgctgcccgcggcgccgccc
ccggccgggggctgcccggcccgctgcgagtgcgcagccccgacgcgctccgtggcgtgc
gcgcgccgccgcctgaccgccgtgcccgacggcatccccgccgagacgcgcctgctggag
ttgagccgaaaccgcatccgctgcctgaacccgggcgacctggccgcgctgcccgccctg
gaggagctcgacttgagccagaacgtcatcgcgcacgtggagccgggcgccttcgccgac
ctgccgcgcctgcgcgtgctccgtctccgcggcaaccagctcaagctcatcccgcccggg
gtcttcacgcgcctggacaacctcacgctgctggacctgagcgagaacaagctggtcatc
ctgctggattacacgttccaggacctgcacagcctgcggaggctcgaggtgggcgacaac
gacctggtgttcatctcgcgccgggccttcgccggcttgttggcgctggaggagttgacc
ttggagcgctgcaacctcaccgcgctgtcgggggaatcgctgggccacctgcggggccta
ggggccctgcgcctacgacacctggccatcgctgccctggaggaccagaacttccagaag
cttccggggctgctgcacctggagatcgacaactggccgctgctggaggaggtggccgcg
ggcagcctgcagggtctcaacctgacgtcgctgtcggtcacccacaccaacatcaccgcc
gtgccggcggccgcactccgacaccaggcacacctgacctgcctcaacctgtcgcacaac
ccgatcagcacggtgccccgcggatccttccgggacctggtgcgcctgcgcgagctgcac
ctcgccggggccctgctggcggtggtggagccacaagcgttcttggggcttcgccagatc
cgcctgctcaacctctccaacaacctgctctccaccctggaggagagcacgttccactcg
gtcaacacgctggagacgctgcgcgtggacgggaacccgctggcctgcgactgccgcctg
ctgtggatcgtgcaacgccgcaagaccctcaacttcgacggccggctgccggcctgcgcc
accccggccgaggtgcgcggcgacgccctgcgcaacctgcccgattccgtgctgttcgag
tatttcgtctgccggaagcctaagatccgcgagcgccgcctgcagcacatcacggcggcg
gcgggcgacgacgtgcgcttcctgtgccgcgccgagggcgagcccgcgcccgccgtggcc
tgggtgacgccccagcaccgggcggtgacggccaacagcgccggccgcgcgcgcgtgctg
cctgggggcaccctggagatcctggacacgcggccgcaggacagcggcacctacacgtgc
gtggccagcaacgcgggcggcaacgacacctacttcgccacgctgaccgtgcagcccgag
ccggccaccaaccggaccccgggcgaggggcgcaacgagacgctgctggccgcgcgcttc
ccgctggacctcaccaccatcctggtgtccacggccatgggctgcatcaccttcctgggc
gtggtgctcttctgcttcgtgctgctgttcgtgtggagccgcggccgcgggcagcacaag
aataacttctccgtggagtactccttccggaaagccgacgggcccgccgccgccgccggc
cagggtggagcccggaagttcaacatgaagatgatctga
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