Perognathus longimembris pacificus (Pacific pocket mouse): 125348088
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Entry
125348088 CDS
T08928
Symbol
Tfdp1
Name
(RefSeq) transcription factor Dp-1 isoform X1
KO
K04683
transcription factor Dp-1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03083
Polycomb repressive complex
plop04110
Cell cycle
plop04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125348088 (Tfdp1)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125348088 (Tfdp1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125348088 (Tfdp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125348088 (Tfdp1)
03036 Chromosome and associated proteins [BR:
plop03036
]
125348088 (Tfdp1)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
125348088 (Tfdp1)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
125348088 (Tfdp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DP
WHD_E2F_TDP
Motif
Other DBs
NCBI-GeneID:
125348088
NCBI-ProteinID:
XP_048197002
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Position
3:complement(536123..585650)
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AA seq
410 aa
AA seq
DB search
MAKDASLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNTLGKQLLPKTFGQSNVNITQ
QVVIGTPQRPAASNTIVVGSPHTPSTHFVSQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
RQAEQQAHRPPPPNSVIHLPFIIVNTSRKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGSIGGVFITTSGPASNGTRLS
ASDLSNGADGMLATSSNGSQYSGSRVETPVSYVGEDDDDEDDFNENDEED
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatgccagtctaattgaagccaacggagaactaaaggtctttatagaccag
aaccttagtcctgggaaaggtgtggtatcgctggtggctgtgcacccatccacagtgaac
acacttggaaagcagctcttgccaaaaaccttcgggcagtctaatgtcaacatcacacag
caagtggtgattggtacgcctcagagaccagcagcatcaaacactattgtggtaggaagc
ccacacacccccagcactcactttgtgtcccagaaccagccgtctgactcctcaccttgg
tctgctgggaagcgtaacaggaaaggtgaaaagaatggcaagggcttgcggcatttctct
atgaaggtgtgtgagaaggtgcagagaaaagggaccacctcctacaacgaggtggccgat
gagctggttgcagagttcagtgctgccgataaccacatcctaccaaatgagtcagcttat
gaccagaagaacatccggcggcgtgtctatgatgccttaaatgtgctgatggctatgaat
atcatctccaaggagaaaaaggagatcaagtggatcggcctgcctaccaactctgctcag
gagtgccagaacttagaggtagagcggcagcggaggctggagcggatcaaacagaagcag
tcccagcttcaggagcttatcctacagcaaattgccttcaagaacttggtgcagagaaac
cgccaggcggagcagcaggcccaccggccacccccacccaactcggtcatccacctgccc
ttcatcattgtcaacaccagcaggaagacggtcattgactgcagcatttccaatgacaaa
tttgagtacctgttcaactttgacaacacgtttgaaattcacgatgacattgaagtgctc
aagcgcatgggcatggcatgcgggctggagtcaggaagctgctcggccgaagacctcaaa
atggcaagaagcttggtaccaaaagctctggaaccatacgtgacagaaatggctcaggga
tccatcggcggggtgttcatcacgacatcaggccccgcctccaatggcacgcggctttct
gccagtgacttgagcaatggtgccgacgggatgctggccacaagttccaacgggtcccag
tacagcggctccagggtggagacccctgtgtcctacgtgggggaggatgacgacgacgag
gacgacttcaatgagaatgacgaggaagactga
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