Perognathus longimembris pacificus (Pacific pocket mouse): 125348094
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Entry
125348094 CDS
T08928
Symbol
Lamp1
Name
(RefSeq) lysosome-associated membrane glycoprotein 1 isoform X1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03272
Virion - Hepatitis viruses
plop03273
Virion - Lassa virus and SFTS virus
plop04140
Autophagy - animal
plop04142
Lysosome
plop04145
Phagosome
plop05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125348094 (Lamp1)
03272 Virion - Hepatitis viruses
125348094 (Lamp1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125348094 (Lamp1)
04142 Lysosome
125348094 (Lamp1)
04140 Autophagy - animal
125348094 (Lamp1)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
125348094 (Lamp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125348094 (Lamp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plop04147
]
125348094 (Lamp1)
04090 CD molecules [BR:
plop04090
]
125348094 (Lamp1)
Membrane trafficking [BR:
plop04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
125348094 (Lamp1)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
125348094 (Lamp1)
Other autophagy associated proteins
RNautophagy/DNautophagy
125348094 (Lamp1)
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
125348094 (Lamp1)
CD molecules [BR:
plop04090
]
Proteins
125348094 (Lamp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
CTV_P6
TSKS
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
125348094
NCBI-ProteinID:
XP_048197021
LinkDB
All DBs
Position
3:complement(720714..739165)
Genome browser
AA seq
418 aa
AA seq
DB search
MAVPDRARRPPPLLLLLLLAGLAHGASAVFVVKDSNGTACIMANFSAHFWTSYETELGSQ
NASVYLPPSAEVLNSSSCGGNSSDPSLTIAFGRGYSLTLNFTRNATRYQVQVMRFTYNMS
DTETFPNASAKGSKSEESITDIRADIDKKYRCVSGTMVHMNDVVILLWDATIQAYLSNSS
FSQGETRCRQDIPSPTTAPPAPTTAPPSPTPTAEPTSPSVSRYNVSGANGTCLLASMGLQ
LNFTYTRKDNMTVIRVLNLNPNHTKAVGSCGPYHVALTLLSEEDFFLTLKFGMNTSASRF
FLEGVQLNMTLPDAKDPSFQAANSSLRALQASVGNSYRCNTEERLYVTQAFSLNIFSVWV
QAFKVDGDTFGSVEECLLDGNNMLIPIAVGGALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcggtccccgaccgcgctcggcggccgccgccgctgctgctgctgctgctgctggca
ggccttgcacatggtgcctctgcagtattcgtggtgaaagacagcaatgggacagcttgc
ataatggccaacttctctgctcacttctggacaagctatgagactgagcttggttctcag
aatgcatctgtctacctgccaccctctgcggaagtactgaatagcagctcttgcggaggg
aattcttctgaccccagtctcacaattgcttttggaagaggatattcactgacgctcaat
ttcacaagaaacgcaacacgttaccaagtccaggtcatgcgcttcacttataacatgtca
gacacagaaactttccccaatgccagcgccaagggaagtaagtctgaggagtccatcact
gacatcagggcagatatagacaaaaagtaccggtgtgtcagcggcacgatggttcacatg
aatgatgtggtcatcttactctgggatgccactatccaagcctacctgtccaacagcagc
ttcagccagggagagacacgctgcaggcaggacataccgtcaccgaccaccgcaccaccc
gcgccgaccaccgcacctccaagtcccacgccaacagctgagcccaccagcccctcggtg
tccaggtacaatgtgagtggcgccaacgggacctgcctgctggccagtatggggctgcag
ctgaacttcacctacacacggaaagacaacatgactgtgatcagagtgctcaacctcaat
ccaaaccacaccaaagctgtggggagctgtggtccctaccacgtggccctgaccttgctg
agcgaggaggatttcttcctgaccttgaagtttggcatgaatacaagtgctagccggttt
ttcctggaaggagtccagttgaacatgactcttcccgatgccaaagacccctcgttccaa
gctgccaacagctcgctgcgagccttgcaggcctctgtggggaactcgtacaggtgtaac
accgaggagcggctgtatgtcacgcaggctttctccctcaacatcttcagcgtgtgggtg
caggcgttcaaagtggacggggacacattcgggtctgtggaagagtgtttgctggacggg
aacaacatgctgatccccatcgctgtgggcggcgccctggcggggctggtcctcatcgtc
ctcatcgcctacctcatcggcaggaagaggagtcacgccggctaccagaccatctag
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