Perognathus longimembris pacificus (Pacific pocket mouse): 125348096
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Entry
125348096 CDS
T08928
Symbol
Cul4a
Name
(RefSeq) cullin-4A
KO
K10609
cullin 4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03420
Nucleotide excision repair
plop04120
Ubiquitin mediated proteolysis
plop05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125348096 (Cul4a)
09124 Replication and repair
03420 Nucleotide excision repair
125348096 (Cul4a)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
125348096 (Cul4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125348096 (Cul4a)
03400 DNA repair and recombination proteins [BR:
plop03400
]
125348096 (Cul4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plop04147
]
125348096 (Cul4a)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
125348096 (Cul4a)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
125348096 (Cul4a)
TCR (transcription coupled repair) factors
Cul4-CSA complex
125348096 (Cul4a)
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125348096 (Cul4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
ADH_zinc_N
Motif
Other DBs
NCBI-GeneID:
125348096
NCBI-ProteinID:
XP_048197027
LinkDB
All DBs
Position
3:complement(740525..775330)
Genome browser
AA seq
759 aa
AA seq
DB search
MADEGPRKGSVSALVGRTNGLTKPAALASGPAKPGGAGGSRKLVIKNFRDRPRLPDNYTQ
DTWRKLHEAVRAIQGSTSIKYNLEELYQAVENLCSHKVSPTLYKQLRQVCEDHVQAQILP
FREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSLWDMGLELFRN
HIISDRMVQSKTIDGILLLIERERSGEAVDRSLLRSLLSMLSDLQVYKDSFELKFLEETN
CLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDHSTQKPLIACVERQLLGEHLT
AILQKGLDHLLDENRVPDLTQMYQLFSRVKGGQHALLQHWSEYIKTFGTTIVINPEKDKD
MVQDLLDFKDKVDHVVEVCFQRNERFINLMKESFETFINKRPNKPAELIAKHVDSKLRAG
NKEATDEELERILDKIMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLK
HECGAAFTSKLEGMFKDMELSKDIMVHFKQHMQNQSSPGPIDLTVNILTMGYWPTYTPME
VHLPPEMVRLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLL
MFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKARVLIKSPKGKEVEDGDRFIFNGEF
KHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELY
NQLKFPVKPGDLKKRIESLIDRDYMERDKDSPNQYHYVA
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgagggcccgcggaagggcagcgtctcggcactcgtgggccgcaccaacggc
ctcaccaagcccgcggccctggccagcggccccgccaagccggggggcgcgggcggctcc
aggaagctggtcatcaagaacttccgagacaggccgcggctgccggacaactacactcag
gacacgtggcggaagctgcacgaggcggtccgggccatccagggcagcacgtccatcaag
tacaacctggaggagctctaccaggctgttgaaaatctttgttctcacaaggtctcccca
acactctacaagcagctacgccaggtctgcgaggaccacgtccaagcacaaatacttccg
ttcagagaagattcactagacagtgttttgtttctaaagaagataaacacgtgctggcaa
gatcactgcagacaaatgatcatgatcagaagtattttcctgtttctggaccgcacttat
gtcctgcagaactccatgctcccttctctctgggacatgggcctggagctgttccggaac
catatcatcagtgacagaatggtgcagagtaagaccattgatggcatcctgctgctgatc
gagcgagaaaggagcggtgaggctgttgaccggagcctgttacggagcctgctgagcatg
ctctcagatctccaggtatataaagattcgtttgaactgaaatttttggaagagactaat
tgtttatatgctgcagaaggccaaagattaatgcaagagagagaggttccagaatacctt
aaccatgtgagtaagcgtctggaagaggaaggagaccgtgtgatcacttacctggaccac
agcacacagaaaccactgattgcttgtgtggagagacagctactaggtgaacatttaaca
gcaattctccagaaagggctggaccacctactggatgagaacagagtgccagacctcacg
cagatgtaccagctgttcagccgggtgaagggtggtcagcacgcgctgctgcagcactgg
agcgagtacatcaagacttttgggacaacgattgttatcaatcctgaaaaagataaagac
atggtgcaagatttgctggacttcaaggacaaagtggaccatgtggtagaggtgtgcttc
cagaggaatgagcgcttcatcaaccttatgaaggaatcctttgagacgttcatcaacaag
agacccaacaagcctgcagagctaatcgctaagcatgtggattcaaagctacgagcaggc
aataaggaagcgacagacgaggagctggagaggatcctggataagatcatgatcctgttc
cggttcatccacggtaaagatgtctttgaagcattttataaaaaggatttggcaaagagg
ctgcttgttggaaagagtgcttctgttgatgctgagaagtccatgctgtcgaaactcaag
catgagtgcggggcagcgttcaccagcaagctagagggcatgttcaaggacatggagctt
tccaaggacatcatggttcacttcaagcagcacatgcagaaccagagctccccgggtcct
atagacctgactgtgaatatccttactatgggctactggcccacatacacacccatggag
gtgcatctccctccggagatggtcagacttcaagaggtattcaagaccttctacctaggc
aagcacagcggccggaagcttcagtggcagacaacattagggcatgctgtgctgaaagca
gagtttaaagaggggaagaaagagttccaggtgtccctcttccagacattggtgctgctc
atgttcaacgaaggggatggattcagctttgaagaaataaaaatggccactgggatagag
gacagtgaattgagaagaacgctgcagtctctggcctgtggtaaagcccgcgttctgatt
aaaagtcccaaaggaaaggaggtagaagatggggacagattcatttttaatggagaattc
aagcacaagttattcagaataaagatcaatcaaattcagatgaaggaaaccgttgaggaa
caagttagcactacagagagagtgtttcaggacagacaataccagatcgatgctgcaatt
gtcagaataatgaaaatgagaaagactctaggacataaccttctcgtctctgagctgtat
aatcagctgaaattccccgtaaagcctggagatttgaaaaagagaatcgaatcactaata
gacagagactatatggagcgagataaagacagtccaaatcagtaccactatgtggcatga
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