Perognathus longimembris pacificus (Pacific pocket mouse): 125348171
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Entry
125348171 CDS
T08928
Symbol
Gpc6
Name
(RefSeq) glypican-6
KO
K08112
glypican 6
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
plop00535
]
125348171 (Gpc6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
plop00537
]
125348171 (Gpc6)
Proteoglycans [BR:
plop00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
125348171 (Gpc6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
plop00537
]
Others
125348171 (Gpc6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glypican
DUF5856
Motif
Other DBs
NCBI-GeneID:
125348171
NCBI-ProteinID:
XP_048197139
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Position
3:complement(11251689..12195596)
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AA seq
555 aa
AA seq
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MPSWIGAVILPLSGLLWCLPAGADVKARSCGEVRQAYGAKGFSLVDIPYQEIAGEHLRIC
PQEYTCCTTEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRHKKFDEFFRELLENAEKSL
NDMFVRTYGMLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWARLLERMFQLINPQY
HFNEDYLECVSKYTDQLKPFGDVPRKLKIQVTRAFIAARTFVQGLTVGREVANRVSKVSP
TPGCIRALMKMLYCPYCRGLPAVRPCNNYCLNVMKGCLANQADLDTEWNLFIDAMLLVAE
RLEGPFNIESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQPKPAPALRSARSVPENF
NTRFRPYNPEERPTTAAGTSLDRLVTDIKEKLKLSKKVWSALPYTICKDERVTAGTSNEE
ECWNGHSKARYLPEIMNDGLTNQINNPEVDVDITRPDTFIRQQIMALRVMTNKLKNAYNG
NDVNFQDTSDESSGSGSGSGCMDDVCPTEFEFVTTEAPAVDPDRREEDSSAARLSHSLLS
LSLACLVLALQRLCR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttggatcggggctgtgatccttcccctctcggggctgctgtggtgtctgccg
gccggcgcggatgtgaaggctcggagctgcggcgaggtccgccaggcgtacggtgccaag
ggattcagcctggtggacatcccctaccaggagatcgcaggggaacacttgcggatctgt
cctcaggaatatacatgctgcacgacggaaatggaagacaagttaagccaacaaagcaag
ctcgagtttgaaaacctcgtggaagagacaagccactttgtccgcacaacatttgtgtca
aggcacaagaaatttgacgaatttttccgagagctgctggagaatgcagagaaatccctg
aatgacatgtttgtccggacttatggaatgctgtacatgcagaattccgaagtgttccaa
gacctgttcacggaactgaagagatactacactgggggcaacgtgaacctggaggagatg
ctcaatgatttctgggcccggctcttggaacggatgttccagctgataaaccctcaatac
cacttcaacgaggactatctggaatgcgtgagcaagtacacagaccagctgaaaccattt
ggggatgtgccccggaaactgaagatccaggtcacccgcgctttcattgctgcccgcacc
ttcgtccagggtctgacagtggggagagaagttgcaaaccgagtttccaaggtcagcccc
actcccgggtgcatccgtgccctgatgaagatgctctactgtccgtactgccgaggcctg
cccgccgtgagaccctgcaacaactactgcctcaacgtcatgaagggctgcctggccaac
caggccgacctggacacggagtggaacctgttcatagatgcaatgctcttggtggcagag
agactagaagggccattcaacattgagtcggtcatggaccctatagatgtcaagatttct
gaagccatcatgaacatgcaagaaaacagcatgcaagtgtctgcaaaggtcttccaagga
tgtggccagcccaaaccggctcctgctcttagatcagcccgctccgtgcctgaaaatttt
aacacgcgtttcaggccctataatcccgaggagagacccacgactgctgcaggcaccagc
ctggatagactggtcacagacataaaagagaaattgaagctgtctaaaaaggtctggtcg
gcattaccctacaccatctgcaaagatgagcgcgtgacagcaggcacttccaacgaggag
gagtgctggaacgggcacagcaaagccagatacttgcctgagattatgaatgatggactg
accaaccagatcaacaatcccgaggtggatgtggacatcacacggcctgacacattcatc
agacagcagatcatggctctccgagtgatgaccaacaaattgaagaatgcctacaatggc
aatgacgtcaacttccaggacacaagtgacgaatccagtggctccggcagtggcagtgga
tgtatggatgacgtgtgtcccaccgaatttgaatttgtcaccacagaggcccctgctgtt
gaccccgacaggagggaagaagattcttcagcagctcggcttagccactcccttctctcc
ttgtctctggcctgcctggtcctggctctgcagagactgtgcagataa
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