Perognathus longimembris pacificus (Pacific pocket mouse): 125348177
Help
Entry
125348177 CDS
T08928
Symbol
Slitrk6
Name
(RefSeq) SLIT and NTRK-like protein 6
KO
K25837
SLIT and NTRK-like protein 6
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04514
Cell adhesion molecule (CAM) interaction
plop04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125348177 (Slitrk6)
04517 IgSF CAM signaling
125348177 (Slitrk6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LRRCT_2
LapA_dom
LRR_LRWD1
WFDC11_N
Motif
Other DBs
NCBI-GeneID:
125348177
NCBI-ProteinID:
XP_048197143
LinkDB
All DBs
Position
3:16124495..16131047
Genome browser
AA seq
841 aa
AA seq
DB search
MKLWTPLLYSSLLACISLQSPSPGPSLKGSCDTLCNCEEKDGTMLINCEEKGIKELSQIS
VPPSRPFHLSLLNNGLTRLHTNDFSGLSNAISIHLGFNNIADIEPGSFNGLALLKQLHIN
HNSLEILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIF
RFVPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNKWACNCDLLQLKIWLENMPPQS
VIGEVICNSPPFLKGSILSRLKAESICPTPPVYEEFEDPSGSLHLAVTSSVSDSRMSGKT
ISIFKPPTKAPGVIPYLTKPSTQLPAPYCPIPCNCKVLTPSGLLIHCQERNIESIADLKP
PPQNPRKLILAGNIIHTLMKSDLVEYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNG
NYLTKLNGGMFLGLPNLEYLYLEYNVIKEILPGTFNSLPKLKVLYLNNNLLQVLPLHIFS
GVPLTRINLKTNQFTHLPVSNILDDLGMLSQIDLEDNPWDCSCDLVGLQQWTQKLSKNTV
TDDILCTSPPHLNKKELKALNSELLCPGLVNNPSLATQSLSMIVTPPTTTTNTPGSLLSS
LTDAVPLSVLILGLLVVFITIVFCAAGIVVLVLHRRRRYKKKQVDEQVRDNSPVHLQYSM
YGHKTTHHTAERPSASLYEQHMVSPMVHVYRSPSFGPKHLEEEEERNEKEGSDVKNLQRS
LLERENYSPLTGSNLKYKTTDQSTEFLSFQDASSLYRNILEKERELQQLGITEYLRKNIA
QLQPDREVHYPAPHEELKLMETLMYSRPRKVLVEQTKNEYFELKANLHAEPDYLEVLEQQ
T
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtggactcctctcttgtattcatctctccttgcctgtatatctttacagtcc
ccatctccagggccctcactgaaaggatcttgtgataccctttgcaactgtgaggaaaaa
gatggcacaatgttaattaattgtgaagaaaaaggtatcaaggaattatcccaaataagc
gtgccaccatcccgaccttttcacctgagcttattgaataatggcttgacaaggcttcac
accaatgacttttctggacttagcaatgctatttcaatacacctgggatttaacaacatt
gcagacattgagcctggttcatttaatggccttgccctcctgaaacagcttcatatcaac
cataattccttagaaattcttaaggaggacacttttcatggattagaaaacttggaattc
ctacaagccgataacaatttcattacagtgattgaaccaagtgcctttagcaagctcaac
agacttaaagttttaatcttaaatgacaatgctattgagagtctgccaccaaacatcttc
cgatttgttcctttaactcacttagatcttcgtgggaatcagttgcaaacactgccttat
gttggttttttagaacacattggccggatattggatctgcagttggaggacaataagtgg
gcttgcaattgtgacttactgcagctcaaaatctggttggagaacatgcctccacagtct
gtcattggggaggtcatatgcaacagtcctccatttttgaaaggaagcatattaagtcga
ctgaaagcagagtctatttgccccactccaccagtgtatgaagagtttgaggatccctct
ggatcattgcatctggcagtcacatcttcagtaagtgatagtcgcatgtcaggcaagacc
atatccatttttaaaccacctaccaaagcacctggtgtgataccctaccttacaaagcca
tccactcagcttccagcaccttactgtcctattccttgcaactgcaaagtccttacccca
tcaggacttttaattcattgtcaagaacgcaatattgaaagcatagcagatctcaaacct
cctccacagaatcctagaaagctgattctagcgggaaatattatacacaccttaatgaaa
tctgatctggtggagtatttcactttggaaatgcttcatttgggaaacaatcgtattgaa
gttcttgaagaaggatcctttatgaatctcacaagactacaaaagctctacttgaatggc
aactatcttaccaaactaaatggaggcatgtttcttgggcttcccaaccttgagtactta
tatctagaatataatgtgattaaggaaatcttaccaggaacttttaactcactgcccaaa
ctcaaagtactttatttaaataacaacctccttcaagttttacccctgcatattttttca
ggagttcctctcactaggataaatcttaaaacaaaccagttcacccatctccctgtcagt
aacatcttggatgacttaggtatgttgtcccagattgaccttgaggataacccctgggac
tgctcttgtgacctggttggattacagcaatggacacaaaagttaagcaagaacacggtg
actgatgacatcctctgcacgtccccacctcacctcaacaaaaaggaattgaaagccctg
aacagtgaacttctctgcccaggtttagtgaataatccctccctggcaacccagagcctt
tccatgatcgtcacacctcctacaaccactacaaacaccccggggtctcttttaagctct
ctcacggatgctgtcccactatcggttctcatattgggacttctggttgtctttataacc
attgtgttctgtgctgctgggatcgtggttcttgttctccatcgaaggagaagatataaa
aagaagcaagtggatgagcaagtgagagacaacagtcctgtgcaccttcagtacagcatg
tatggccacaaaacaactcaccacactgccgaaaggccctctgcctctctctatgagcag
cacatggtgagcccaatggttcatgtctacagaagtccatcctttggtccaaagcatttg
gaagaggaagaagaaaggaatgagaaagaaggaagtgatgtgaagaatctccaaagaagc
cttttagaacgggaaaactattcgccactcacagggtcaaacttgaaatacaaaaccaca
gaccaatccacagaatttttatctttccaggatgccagttccttatataggaatatttta
gagaaagaacgagaacttcagcaactgggaatcacagagtacctaaggaaaaacattgct
cagctccaaccagatagggaggtacattatcccgcaccccatgaagaactgaaattaatg
gaaacgttaatgtactcacggccaaggaaggtattggtggaacagactaaaaacgagtat
tttgaactcaaagctaatttacatgctgaacctgactatttagaagtcctagagcagcaa
acttag
DBGET
integrated database retrieval system
