KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125348329
Entry
125348329         CDS       T08928                                 
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
  KO
K11864  BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03440  Homologous recombination
plop04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    125348329
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    125348329
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:plop01002]
    125348329
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:plop04121]
    125348329
   03036 Chromosome and associated proteins [BR:plop03036]
    125348329
   03400 DNA repair and recombination proteins [BR:plop03400]
    125348329
Peptidases and inhibitors [BR:plop01002]
 Metallo peptidases
  Family M67
   125348329
Ubiquitin system [BR:plop04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    125348329
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    125348329
   BRISC complex
    125348329
Chromosome and associated proteins [BR:plop03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    BRISC complex
     125348329
DNA repair and recombination proteins [BR:plop03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-A complex
     125348329
SSDB
Motif
Pfam: JAB BRCC36_C Prok-JAB
Other DBs
NCBI-GeneID: 125348329
NCBI-ProteinID: XP_048197412
LinkDB
Position
3:47013037..47015731
AA seq 286 aa
MAVQAVHLDSDAFLVCLHHALSTEKEEVMGLCIGVLKEEEEESDSKFASTGADMSPAAEK
AHSARIVHIRSVIILPRSDKRKDRVEISPEQLSAASVEAERLAELTGCPMRVVGWYHSHP
HITVWPSHVDVRTQAAYQMMDPRFVGIIFSCFVEDKNTNIGQIAFTCFQSARAPRSSEYE
RVDIPIHVVPRASIGKACLESLVELPKILCQEELASYRRSCGCPDQDSVTRIHNACVYAG
NVCGQASAVSGPLLQWLENRWEQNQELLQALTQEKKELMEKLSSLK
NT seq 861 nt   +upstreamnt  +downstreamnt
atggcggttcaggccgttcacctggattctgacgctttcctcgtctgtctccaccacgct
ctgagcactgagaaagaggaggtaatgggcctgtgtattggggtgttgaaggaggaggag
gaggaaagtgactccaaatttgccagtactggagcggatatgagcccggcggcagagaag
gcccactcagcccgaatcgtccatattcgctccgtcatcatcttgccgcggtcggataag
aggaaggaccgggtggagatttccccggaacagctgtccgcggcctcggtggaggcggag
aggttggcagagctcaccgggtgccccatgcgggtagtgggctggtaccactcccacccg
cacatcactgtctggccctcccacgtggacgttcgcacccaggccgcctaccagatgatg
gatccacgcttcgttgggattatcttctcttgtttcgtggaggataaaaacacaaacatt
ggccagatcgctttcacttgcttccaatctgcacgggcccctaggagctcagagtatgag
agagttgatattcccatccacgtagtaccccgagccagcattgggaaggcatgcctcgag
tcgctagtggagctgcccaagatcctctgccaggaagaactggcctcctacaggaggagc
tgtggttgccccgaccaggactcggtaaccaggatccacaatgcctgcgtgtatgcgggc
aatgtatgtggccaggcttccgccgtcagtgggcctctcctccagtggctggagaacaga
tgggagcaaaaccaagaacttttgcaggctttgacccaagagaagaaagagcttatggaa
aaactctcttctctaaaataa

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